Stars
Julia module to perform haplotype allele-specific DNA methylation analysis.
List of software packages for multi-omics analysis
Analysis code for Buckberry, Liu, Poppe, Tan et al. (2023) "Transient naive reprogramming corrects hiPS cells functionally and epigenetically" Nature
Data quality assessment and metadata reporting for data frames and database tables
This repository compiles the documentation of the Theme Collaboration Award (2023) from Telethon Kids Institute
fast and accurate alignment of BS-Seq reads using bwa-mem and a 3-letter genome
tools for working with Bisulfite Sequencing data while preserving reads intrinsic dependencies
Smart benchmarking of pull requests with statistical confidence
Overview of SmartCustody Topics, for Responsible Key Management
Data and methodology for the Big Mac index
toolbox for analysing BS-seq data, advance features in SNV, ASM and DMR
AI-Powered Photos App for the Decentralized Web 🌈💎✨
A collection of sequencing protocols and bioinformatic resources for SARS-CoV-2 sequencing.
Source code for JBrowse 2, a modern React-based genome browser
An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)
Rmarkdown / compiled html files for human reprogramming dataset analysis
A collection of scripts and notes related to genomics and bioinformatics