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CV-2 Public
Forked from arasgungore/arasgungore-CVMy curriculum vitae (CV) written using LaTeX.
TeX MIT License UpdatedMar 7, 2025 -
about-common-mechanism Public
R Markdown for Understanding the Common Mechanism and Suggestions for Improvement
TeX UpdatedJul 31, 2024 -
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vertebrate_host_jumps Public
Forked from cednotsed/vertebrate_host_jumpsJupyter Notebook UpdatedApr 30, 2024 -
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biorisk-botecs Public
Forked from finxter/jupyter_webapp_demoBack-of-the-envelope calculations (BOTECs) assessing different pandemic risks
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configs Public
Forked from nf-core/configsConfig files used to define parameters specific to compute environments at different Institutions
Nextflow MIT License UpdatedJan 24, 2023 -
genomad Public
Forked from apcamargo/genomadgeNomad: Identification of mobile genetic elements
Python Other UpdatedNov 30, 2022 -
DeepVirFinder Public
Forked from jessieren/DeepVirFinderIdentifying viruses from metagenomic data by deep learning
Python Other UpdatedNov 14, 2022 -
STRONG Public
Forked from chrisquince/STRONGStrain Resolution ON Graphs
Python MIT License UpdatedNov 14, 2022 -
RiboDetector Public
Forked from hzi-bifo/RiboDetectorAccurate and rapid RiboRNA sequences Detector based on deep learning
8000 Python GNU General Public License v3.0 UpdatedSep 15, 2022 -
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lightdock-nf Public
Nextflow pipeline to run LightDock for protein-protein docking
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AutoPlate Public
RShiny app to automate the analysis of 96-well plates such as the fitting of dose-response curves for Pseduotype Micro Neutralisation (pMN) assays
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attentive-parapred Public
Forked from andreeadeac22/attentive-parapredCode for Attentive cross-modal paratope prediction
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parapred Public
Forked from eliberis/parapredParatope Prediction using Deep Learning
Python MIT License UpdatedAug 25, 2021 -
viral-mutation Public
Forked from brianhie/viral-mutationLanguage modeling of viral evolution
Python MIT License UpdatedFeb 17, 2021 -
data-downloader Public
Nextflow pipeline to download files using axel
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deepvariant Public
Forked from nf-core/deepvariantGoogle's DeepVariant variant caller as a Nextflow pipeline
Nextflow MIT License UpdatedJul 11, 2020 -
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h3agwas Public
Forked from lifebit-ai/h3agwasGWAS Pipeline for H3Africa
Python Other UpdatedApr 20, 2020 -
deepvariant-1 Public
Forked from google/deepvariantDeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
Python BSD 3-Clause "New" or "Revised" License UpdatedMar 26, 2020 -
nf-fastq-dumper Public
Forked from lifebit-ai/nf-fastq-dumperDump all fastqas from SRA project ID - just that
Nextflow UpdatedMar 25, 2020 -
snps Public
Forked from apriha/snpstools for reading, writing, merging, and remapping SNPs
Python BSD 3-Clause "New" or "Revised" License UpdatedJan 26, 2020 -
phewas Public
Forked from lifebit-ai/phewasPerforms a PheWAS analysis & generates a Manhattan plot using the PheWAS R package
Nextflow UpdatedOct 29, 2019
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