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Repository storing code-lists used in a project at the University of Edinburgh identifying multiple long-term conditions (MLTCs) in UK Biobank and linked electronic health records
With Holoviews, your data visualizes itself.
File Parser optimised for LLM Ingestion with no loss 🧠 Parse PDFs, Docx, PPTx in a format that is ideal for LLMs.
1 Line of code data quality profiling & exploratory data analysis for Pandas and Spark DataFrames.
skimpy is a light weight tool that provides summary statistics about variables in data frames within the console.
Dataframes powered by a multithreaded, vectorized query engine, written in Rust
Interactive Data Visualization in the browser, from Python
An extremely fast Python linter and code formatter, written in Rust.
Fast data visualization and GUI tools for scientific / engineering applications
Tools to process and analyze deep sequencing data.
Statistical package in Python based on Pandas
scikit-bio: a community-driven Python library for bioinformatics, providing versatile data structures, algorithms and educational resources.
Pysam is a Python package for reading, manipulating, and writing genomics data such as SAM/BAM/CRAM and VCF/BCF files. It's a lightweight wrapper of the HTSlib API, the same one that powers samtool…
Source of biopython.org website, migrated from MediaWiki
Single-cell analysis in Python. Scales to >100M cells.
A comprehensive library for computational molecular biology
A template repository with instructions on how to run a targets workflow using the UAz cluster
A curated list of awesome ggplot2 tutorials, packages etc.
Customize your Zotero workflow.
DANets (a family of neural networks) for tabular data classification/ regression.
PyTorch implementation of TabNet paper : https://arxiv.org/pdf/1908.07442.pdf
R package for risk regression and prediction with censored data
🪄 Create rich visualizations with AI