Stars
A tool to do quick and dirty inspection of multichannel 3D data. I use it mainly to visualize batches for deep learning.
bloomberg / memray
Memray is a memory profiler for Python
Scalene: a high-performance, high-precision CPU, GPU, and memory profiler for Python with AI-powered optimization proposals
U-Mamba: Enhancing Long-range Dependency for Biomedical Image Segmentation
spock is a framework that helps manage complex parameter configurations during research and development of Python applications
Manipulation and analysis of geometric objects
Connected components on discrete and continuous multilabel 3D & 2D images. Handles 26, 18, and 6 connected variants; periodic boundaries (4, 8, & 6)
A grid sampler for larger-than-memory N-dimensional images
This is a joint project between Helmholtz Imaging (located at DKFZ) and Lin Yang and Otmar Schmid (Helmholtz Munich).
A Benchmark for Failure Detection under Distribution Shifts in Image Classification
Grounded SAM: Marrying Grounding DINO with Segment Anything & Stable Diffusion & Recognize Anything - Automatically Detect , Segment and Generate Anything
The repository provides code for running inference with the SegmentAnything Model (SAM), links for downloading the trained model checkpoints, and example notebooks that show how to use the model.
A framework for data augmentation for 2D and 3D image classification and segmentation
Image transformation, compression, and decompression codecs.
Numpy group_by and set-operations