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Stars
R toolkit for inference, visualization and analysis of cell-cell communication from single-cell and spatially resolved transcriptomics
R package for semi-supervised single-cell data integration
An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.
Co-Expression Module Identification Tool (CEMiTool) official repository
Official repo for the #tidytuesday project
My contributions to the #TidyTuesday challenge, a weekly data visualization challenge. All plots are 💯 created in R with ggplot2.
Bayesian haplotype-based genetic polymorphism discovery and genotyping.
Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)
Utilities for automating bgc (Bayesian genomic cline) file prep, analysis, and results plotting
Collection of code for Bayesian genomic cline analyses
Official code repository for GATK versions 4 and up