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A small repo dedicated to benchmarking various AD libraries

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JamesYang007/ADBenchmark

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AD Benchmark

This is a repository dedicated to benchmarking automatic differentiation libraries for research purposes. This benchmark has only been tested on MacOS Catalina.

Installation

First clone the repository:

git clone https://github.com/JamesYang007/ADBenchmark.git

Then run the setup script to install all dependencies (and their dependencies):

./setup.sh

Note that the setup will use GCC10. If this is not available, you have to manually change the compiler version to the one that is available by editing all instances of gcc-10 and g++-10 in setup.sh. If you must run the setup again for a particular library, delete the folder associated with that library in lib and run the script again.

We have not provided scripts for the following changes and we ask the users to manually make these changes:

  • Add math:: in front of apply in lib/stan-dev-math/stan/math/rev/functor/adj_jac_apply.hpp line 513. Compiling with C++17 standard raises error due to ambiguity with std::apply.

To build benchmarks:

./clean-build.sh -DCMAKE_C_COMPILER=gcc-10 -DCMAKE_CXX_COMPILER=g++-10

If GCC10 is not available, just replace gcc-10 and g++-10 with the correct alias for the available version (e.g. gcc-8 and g++-8 if GCC8 is available). This will create directories for each library in build/benchmark and build each test as a separate executable in these directories. Note: for the safest build results, use the same compiler that you used in setup.

We wrote a Python script in analyze called analyze.py that scrapes build/benchmark directory for all tests in each library directory, runs the benchmark programs, and saves the absolute times (in nanoseconds) and the plots of relative time against FastAD for each test in docs/data and docs/figs, respectively. To run the script:

cd analyze
python3 analyze.py

It is important to be inside analyze directory.

Benchmark Results

Sum

Sum (Iterative)

Product

Product (Iterative)

Log-Sum-Exponential

Matrix Product and Sum Elements

Normal-Log-PDF

Regression Model

Stochastic Volatility Model

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A small repo dedicated to benchmarking various AD libraries

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