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This tools counts the number of specific k-mers within sequence data. The counts can then be compare to other counts to determine to compute the probability that sample are of the same origin to di…
Symmetric DUST for finding low-complexity regions in DNA sequences
🌺 reference-free transcriptome assembly for short and long reads
A Circos-based tool to visualize genome assembly consistency or synteny between assemblies.
Converts profiling output to a dot graph.
The BTL C/C++ Common bloom filters for bioinformatics projects, as well as any APIs created for other programming languages.
Simulating the performance of various streaming algorithms. #experimentalmathematics
Create Bloom filters for a given reference and then use it to categorize sequences