8000 Get candis setup by rupav · Pull Request #61 · HelikarLab/candis · GitHub
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Get candis setup #61

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Merged
merged 2 commits into from
May 26, 2018
Merged

Get candis setup #61

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283db4a
Added installation steps for yarn
rupav May 26, 2018
a64cdc3
Testing yarn install through get-candis
rupav May 26, 2018
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11 changes: 6 additions & 5 deletions
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Original file line number Diff line number Diff line change
Expand Up @@ -11,12 +11,13 @@ python:
# - "3.6-dev"
# - "3.7-dev"
before_install:
- sudo -H pip install -U pipenv
- curl -sS https://dl.yarnpkg.com/debian/pubkey.gpg | sudo apt-key add -
- echo "deb https://dl.yarnpkg.com/debian/ stable main" | sudo tee /etc/apt/sources.list.d/yarn.list
- sudo apt-get update && sudo apt-get install yarn
- # sudo -H pip install -U pipenv
- # curl -sS https://dl.yarnpkg.com/debian/pubkey.gpg | sudo apt-key add -
- # echo "deb https://dl.yarnpkg.com/debian/ stable main" | sudo tee /etc/apt/sources.list.d/yarn.list
- # sudo apt-get update && sudo apt-get install yarn
install:
- curl -sL git.io/install-candis | sudo python
- # curl -sL git.io/install-candis | sudo python
- sudo python get-candis
- pip3 install pytest-cov # without reinstalling, its not working, latest version is 2.5.1
script:
# - export PIPENV_IGNORE_VIRTUALENVS=1 # To be used when pipenv is tested successfully.
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11 changes: 8 additions & 3 deletions get-candis
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Expand Up @@ -30,14 +30,14 @@ class const(object):

URL_HOMEBREW_INSTALL = 'https://raw.githubusercontent.com/Homebrew/install/master/install'
HOMEBREW_TAPS = ['homebrew/science', 'caskroom/cask']
HOMEBREW_DEPENDENCIES = ['git', 'python3', 'gcc', 'r', 'graphviz']
HOMEBREW_DEPENDENCIES = ['git', 'python3', 'gcc', 'r', 'graphviz', 'yarn']
HOMEBREW_DEPENDENCIES_CASK = ['xquartz', 'weka']

APTGET_DEPENDENCIES = ['build-essential', 'git', 'python3-dev', 'python3-pip', 'graphviz-dev',
'default-jre', 'default-jre-headless', 'default-jdk',
'software-properties-common', 'python-software-properties', 'apt-transport-https',
'dialog', 'apt-utils',
'python3-tk'
'python3-tk', 'curl'
]

URL_CANDIS = 'https://github.com/HelikarLab/candis'
Expand Down Expand Up @@ -203,6 +203,11 @@ def setup_candis(args = None):
# Install Oracle JRE/JDK
popen(addapt, '-y', 'ppa:webupd8team/java')
popen(aptget, 'update')

# Install yarn
popen('curl -sS https://dl.yarnpkg.com/debian/pubkey.gpg | sudo apt-key add -')
popen('echo "deb https://dl.yarnpkg.com/debian/ stable main" | sudo tee /etc/apt/sources.list.d/yarn.list')
popen('sudo apt-get update && sudo apt-get install yarn')

# Auto Agree License.
popen('echo debconf shared/accepted-oracle-license-v1-1 select true | sudo debconf-set-selections')
Expand Down Expand Up @@ -256,4 +261,4 @@ def main(args = None):

if __name__ == '__main__':
args = sys.argv[1:]
main(args)
main(args)
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