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SaProt Public
Forked from westlake-repl/SaProtSaprot: Protein Language Model with Structural Alphabet (AA+3Di)
Python MIT License UpdatedJan 1, 2025 -
foldseek Public
Forked from steineggerlab/foldseekFoldseek enables fast and sensitive comparisons of large structure sets.
C GNU General Public License v3.0 UpdatedAug 14, 2024 -
P450Diffusion Public
Forked from JiangLab2020/P450DiffusionP450Diffusion: A tool for designing P450 sequences based on diffusion model
Jupyter Notebook UpdatedJul 16, 2024 -
structural-evolution Public
Forked from varun-shanker/structural-evolutionPython MIT License UpdatedJul 12, 2024 -
rf_diffusion_all_atom Public
Forked from baker-laboratory/rf_diffusion_all_atomPublic RFDiffusionAA repo
Python Other UpdatedJul 9, 2024 -
gpt_academic Public
Forked from binary-husky/gpt_academic为GPT/GLM等LLM大语言模型提供实用化交互接口，特别优化论文阅读/润色/写作体验，模块化设计，支持自定义快捷按钮&函数插件，支持Python和C++等项目剖析&自译解功能，PDF/LaTex论文翻译&总结功能，支持并行问询多种LLM模型，支持chatglm3等本地模型。接入通义千问, deepseekcoder, 讯飞星火, 文心一言, llama2, rwkv, claude2, m…
Python GNU General Public License v3.0 UpdatedJul 2, 2024 -
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llama3-from-scratch Public
Forked from naklecha/llama3-from-scratchllama3 implementation one matrix multiplication at a time
Jupyter Notebook MIT License UpdatedMay 23, 2024 -
CDS-variant-calculator-and-machine-learning-for-multigene-pathway-optimization Public
Forked from FeiDu0/CDS-variant-calculator-and-machine-learning-for-multigene-pathway-optimizationCDS variant calculator and machine learning for multigene pathway optimization
Python UpdatedMar 30, 2024 -
deepdirect Public
Forked from tianlt/deepdirectPython GNU General Public License v2.0 UpdatedFeb 29, 2024 -
PU-EPP Public
Forked from xinghd142857/PU-EPPThis repository contains the positive-unlabeled learning-based enzyme promiscuity prediction model as described in the paper Deep learning Enables Rapid Identification of Mycotoxin-degrading Enzymes.
Jupyter Notebook GNU General Public License v3.0 UpdatedFeb 8, 2024 -
funsearch Public
Forked from google-deepmind/funsearchJupyter Notebook Apache License 2.0 UpdatedFeb 5, 2024 -
LLaMA-Factory Public
Forked from hiyouga/LLaMA-FactoryEasy-to-use LLM fine-tuning framework (LLaMA, BLOOM, Mistral, Baichuan, Qwen, ChatGLM)
Python Apache License 2.0 UpdatedJan 22, 2024 -
chemprop Public
Forked from chemprop/chempropMessage Passing Neural Networks for Molecule Property Prediction
Python Other UpdatedJan 5, 2024 -
gpt-pilot Public
Forked from Pythagora-io/gpt-pilotDev tool that writes scalable apps from scratch while the developer oversees the implementation
Python MIT License UpdatedJan 4, 2024 -
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chroma Public
Forked from generatebio/chromaA generative model for programmable protein design
Python Apache License 2.0 UpdatedNov 24, 2023 -
protein-ligand-GNN Public
Forked from AndMastro/protein-ligand-GNNThis repository contains the code for the work on protein-ligand interaction with GNNs and XAI
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DeepPurpose Public
Forked from kexinhuang12345/DeepPurposeA Deep Learning Toolkit for DTI, Drug Property, PPI, DDI, Protein Function Prediction (Bioinformatics)
Jupyter Notebook BSD 3-Clause "New" or "Revised" License UpdatedOct 30, 2023 -
OAReactDiff Public
Forked from chenruduan/OAReactDiffAn object-aware diffusion model for generating chemical reactions
Python MIT License UpdatedOct 30, 2023 -
SBILib Public
Forked from structuralbioinformatics/SBILiba handle for protein modelling and engineering
Python MIT License UpdatedOct 3, 2023 -
ConPLex Public
Forked from samsledje/ConPLexAdapting protein language models and contrastive learning for highly-accurate drug-target interaction prediction.
Python MIT License UpdatedSep 29, 2023 -
esm Public
Forked from facebookresearch/esmEvolutionary Scale Modeling (esm): Pretrained language models for proteins
Python MIT License UpdatedSep 26, 2023 -
PROSTATA Public
Forked from AIRI-Institute/PROSTATAJupyter Notebook Apache License 2.0 UpdatedSep 21, 2023 -
hh-suite Public
Forked from soedinglab/hh-suiteRemote protein homology detection suite.
C GNU General Public License v3.0 UpdatedAug 13, 2023 -
This is a process of protein stability modification designed by exploring weak regions of the protein.
Forth UpdatedJul 31, 2023 -
drugchat Public
Forked from xy21hb/drugchatDrugChat: Towards Enabling ChatGPT-Like Capabilities on Drug Molecule Graphs
Python BSD 3-Clause "New" or "Revised" License UpdatedJul 19, 2023
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