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Issues: GMOD/jbrowse

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158 Open 1,102 Closed
158 Open 1,102 Closed
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Issues list

node-modules folder is not created after running ./setup.sh
#1652 opened Oct 9, 2024 by kostasgalexiou
[Question] Is there a way to reduce number of files generated during indexing?
#1651 opened Aug 23, 2024 by shreyas-a-s
1
Using a callback to set the height of sub-features is causing some of those features to be only partially-rendered
#1648 opened May 16, 2024 by john-portwood
6
Feature Request display CIGAR mismatch codes when zoomed out more
#1643 opened May 16, 2023 by childers
1
Pangenome presence absence viz ?
#1641 opened Apr 13, 2023 by colindaven
2
Cannot install jbrowse-1.16.11-release developer version on macos ventura
#1632 opened Dec 8, 2022 by thuynnguyen
1
Hello, I am testing to replace jbrowse with mouse data, but the tbi of the mouse gff3 file is always wrong here. I don't know what is wrong. I would like to ask you about the index. Do you have any mouse data to provide? ? thanks
#1630 opened May 7, 2022 by ouyang-lang
11
Problem with combination track, not working
#1619 opened Dec 10, 2021 by armaos
10
Possible feature request
#1612 opened Aug 25, 2021 by ValWood
4
tab focus for accessibility enhancement?
#1606 opened Jun 11, 2021 by mpoelchau
3
is there a way to organize a large number of datasets?
#1587 opened Mar 31, 2021 by jvera888
2
adding annotation on a gff file results in uniqueID offset-1968619510"
#1556 opened Nov 12, 2020 by Jungal10
9
Gene spans track from maker2jbrowse error
#1548 opened Sep 24, 2020 by cmdcolin
3
Generate-names.pl failure on maker2jbrowse output
#1547 opened Sep 24, 2020 by cmdcolin
Make maker2jbrowse docs on website
#1546 opened Sep 24, 2020 by cmdcolin
Unable to open file.bam and file.bai in the Add track dialog
#1538 opened Aug 12, 2020 by cmdcolin
Using autoscale local, but having pos_color and neg_color relative to global mean
#1530 opened Jul 15, 2020 by Jungal10
6
NPM releases not being updated
#1529 opened Jul 13, 2020 by cmdcolin
Improve jbrowse npm usage workflow help wanted actively soliciting new contributors to take this on!
#1518 opened Jun 22, 2020 by cmdcolin
flatfile-to-json.pl --bed does not generate subfeatures anymore
#1511 opened May 29, 2020 by mpoelchau
16
BED file with strand '.' being converted to strand -1
#1479 opened Mar 9, 2020 by cmdcolin
1
Add ability to load custom types from genbank file
#1476 opened Mar 2, 2020 by cmdcolin
1
add a CITATION file
#1474 opened Feb 26, 2020 by rbuels
Feature Request: support loading psl and/or bed12 tracks
#1469 opened Feb 13, 2020 by malcook
2
Missing plugin crashes jbrowse?
#1443 opened Oct 29, 2019 by hexylena
4
ProTip! What’s not been updated in a month: updated:<2024-11-03.