Stars
Materials and IPython notebooks for "Python for Data Analysis" by Wes McKinney, published by O'Reilly Media
Python - 100天从新手到大师
A versatile pairwise aligner for genomic and spliced nucleotide sequences
Materials for teaching R and tidyverse
坚持分享 GitHub 上高质量、有趣实用的开源技术教程、开发者工具、编程网站、技术资讯。A list cool, interesting projects of GitHub.
Zotero chat PDF with AI, DeepSeek, GPT 4.1, ChatGPT, Claude, Gemini, Qwen3
Curated list of project-based tutorials
Phylogenetic orthology inference for comparative genomics
Make Zotero's citation in Word easier and clearer.
Compute postmortem damage patterns and decontaminate ancient genomes
A post-mapping authentication toolkit for ancient metagenomics
Ultra-fast and memory-efficient (meta-)genome assembler
LongQC is a tool for the data quality control of the PacBio and ONT long reads.
World Geographical Scheme for Recording Plant Distributions (WGSRPD)
rtry: Preprocessing Plant Trait Data
📦 R package to extract data from Global Inventory of Floras and Traits (GIFT)
🐙 KrakenUniq: Metagenomics classifier with unique k-mer counting for more specific results
AdapterRemoval v2 - rapid adapter trimming, identification, and read merging
A Practical and Efficient NCBI Taxonomy Toolkit, also supports creating NCBI-style taxdump files for custom taxonomies like GTDB/ICTV
A simple tool to calculate metrics from a BAM file and filter references with uneven coverages
Software to construct and analyse KewTreeOfLife (PAFTOL project)
The second version of the Kraken taxonomic sequence classification system