Bit Bio
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nf-core-rnaseq
nf-core-rnaseq PublicForked from nf-core/rnaseq
RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
Nextflow 1
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sarek-aws-batch
sarek-aws-batch Public archiveForked from nf-core/sarek
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Nextflow
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fetchngs
fetchngs PublicForked from nf-core/fetchngs
Pipeline to fetch metadata and raw FastQ files from public and private databases
Groovy
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circdna
circdna PublicForked from nf-core/circdna
Pipeline for the identification of extrachromosomal circular DNA (ecDNA) from Circle-seq, WGS, and ATAC-seq data that were generated from cancer and other eukaryotic cells.
Python
Repositories
- nf-core-rnaseq Public Forked from nf-core/rnaseq
RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
Bit-Bio/nf-core-rnaseq’s past year of commit activity - circdna Public Forked from nf-core/circdna
Pipeline for the identification of extrachromosomal circular DNA (ecDNA) from Circle-seq, WGS, and ATAC-seq data that were generated from cancer and other eukaryotic cells.
Bit-Bio/circdna’s past year of commit activity - fetchngs Public Forked from nf-core/fetchngs
Pipeline to fetch metadata and raw FastQ files from public and private databases
Bit-Bio/fetchngs’s past year of commit activity - sarek-aws-batch Public archive Forked from nf-core/sarek
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Bit-Bio/sarek-aws-batch’s past year of commit activity
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