Stars
Bayesian Analysis with Python (Second Edition)
How to do Bayesian statistical modelling using numpy and PyMC3
Write reproducible code for getting and processing ChEMBL
A Python package for causal inference in quasi-experimental settings
High accuracy RAG for answering questions from scientific documents with citations
Ms2 basEd saMple vectOrization (memo) package
🐍 Python Implementation and Extension of RDF2Vec
Metabolomics Standards Initiative Ontology
This is the development home of the workflow management system Snakemake. For general information, see
The similarity score for spectral comparison
yet another ChemClassifier (Python based on wikibase-cli and rdkit)
A script based on the matchms library allowing to calculate spectral similarity measures between two mgf (usually a query file and a library file).
Interactive network visualization in Python and Dash, powered by Cytoscape.js
add-on to plotly which show molecule images on mouseover!
The Mass Spec Query Language (MassQL) is a domain specific language meant to be a succinct way to express a query in a mass spectrometry centric fashion.
Python library for processing (tandem) mass spectrometry data and for computing spectral similarities.
Clinical Knowledge Graph (CKG) is a platform with twofold objective: 1) build a graph database with experimental data and data imported from diverse biomedical databases 2) automate knowledge disco…
MS2Query - machine learning assisted library querying of MS/MS spectra
https://taxonomicallyinformedannotation.github.io/tima
CANOPUS visualization for Jupyter notebook
Code, exercises and tutorials of my personal blog ! 📝
Word2Vec based similarity measure of mass spectrometry data.
A very fast visualization library for large, high-dimensional data sets.
Large-scale tandem mass spectrum clustering using fast nearest neighbor searching.