8000 AlissonPA (Alisson Pinto de Almeida) / Starred · GitHub
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Statistical package in Python based on Pandas

Python 1,791 155 Updated Mar 14, 2025

Workshop Materials for the MPI Workshop, "Intro to Data Analysis in Python for Neuroscientists"

Jupyter Notebook 2 2 Updated Jun 2, 2025

A Python toolbox for analysing animal body movements across space and time

Python 187 10000 64 Updated Jun 26, 2025

Automated and reproducible analysis of multiphoton calcium imaging datasets

Python 7 Updated Jun 20, 2025

Wasp Animal-tracking Zoo project with Pose estimation

Python 6 2 Updated Feb 2, 2024

A Python package for analyzing FED3 data

Python 2 4 Updated Mar 21, 2024

A multi-purpose device tailored to behavioral experiments. It allows control of pokes, RGB LEDs, LEDs, cameras, servo motors and a quadrature counter.

C# 3 1 Updated May 27, 2025

quantification of behavior across chronic social defeat stress

Jupyter Notebook 10 2 Updated Jun 30, 2022

Precision current source, with optional optical feedback, for driving LEDs and laser diodes

C++ 47 21 Updated Oct 7, 2024

A Python package to visualise neuroanatomical data in atlas space

Python 584 90 Updated Jun 3, 2025

Behavioral segmentation of open field in DeepLabCut, or B-SOID ("B-side"), is a pipeline that pairs unsupervised pattern recognition with supervised classification to achieve fast predictions of be…

Python 197 59 Updated Feb 9, 2024

An active learning platform for expert-guided, data efficient discovery of behavior.

Python 59 15 Updated Jun 11, 2025

Guided Photometry Analysis in Python, a free and open-source FP analysis tool.

Python 75 12 Updated Feb 26, 2025

Feeding Experimentation Device version 3

G-code 26 18 Updated Jun 12, 2025
Python 52 11 Updated Aug 30, 2024

Fiber Photometry Analysis

R 10 4 Updated Dec 18, 2024

A flexible open-source GUI-driven toolkit for photometry analysis

Python 7 2 Updated Jan 23, 2024

R toolkit for single cell genomics

R 2,455 950 Updated Jun 24, 2025

DeepLabCut based data analysis package including pose estimation and representation learning mediated behavior recognition

Python 44 6 Updated Jun 26, 2025

Fluid tracking in socially housed rats

C++ 6 2 Updated Aug 27, 2024

We turn natural language descriptions of behaviors into machine-executable code

Python 220 11 Updated Apr 24, 2025

Quantify user-defined behaviors.

Python 79 13 Updated Jun 24, 2025

PYthon Neural Analysis Package 🍍

Python 316 66 Updated Jun 25, 2025

Arduino Uno based signal generator for scientific applications.

C++ 19 5 Updated Sep 24, 2019

The codes, software, models, protocols, and etc. for building and using MINI2P to do the freely-moving recording and analysis. More details can be found in the original paper "Large-scale two-photo…

MATLAB 94 21 Updated Oct 27, 2023

Analysis of ultrasonic vocalizations from mice using computer vision and machine learning

MATLAB 25 10 Updated Jun 30, 2023

A little word cloud generator in Python

Python 10,409 2,335 Updated Apr 12, 2025

📚 Classe LaTeX e estilo bibliográfico compatíveis com as normas da ABNT

TeX 1,079 215 Updated Jul 9, 2024

❗ This is a read-only mirror of the CRAN R package repository. SpatEntropy — Spatial Entropy Measures

R 3 1 Updated Nov 18, 2023

SimBA (Simple Behavioral Analysis), a pipeline and GUI for developing supervised behavioral classifiers

Python 326 160 Updated Jun 26, 2025
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