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root_painter Public
RootPainter: Deep Learning Segmentation of Biological Images with Corrective Annotation
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Code for the paper "Segmentation of Roots in Soil with U-Net"
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SeminalRootAngle Public
GUI application to enable measurement of seminal root angles from segmentations
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RootPainter3D Public
RootPainter3D: Interactive-machine-learning enables rapid and accurate contouring for radiotherapy
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segment-anything Public
Forked from facebookresearch/segment-anythingThe repository provides code for running inference with the SegmentAnything Model (SAM), links for downloading the trained model checkpoints, and example notebooks that show how to use the model.
Jupyter Notebook Apache License 2.0 UpdatedSep 7, 2023 -
localise_to_segment Public
Localise to segment: crop to improve organ at risk segmentation accuracy
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texfig Public
Forked from nilsvu/texfigUtility to generate PGF vector files from Python's Matplotlib plots to use in LaTeX documents.
Python MIT License UpdatedMar 15, 2023 -
mask_to_dicom_rtstruct Public
Convert numpy mask to dicom rtstruct
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PROSTATEx_masks Public
Forked from rcuocolo/PROSTATEx_masksLesion and prostate masks for the PROSTATEx training dataset, after a lesion-by-lesion quality check.
Creative Commons Attribution 4.0 International UpdatedJul 26, 2022 -
DART Public
scripts to work with evaluation of dose summation reproducibility
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dicom_outliner Public
Create a HU 3000 outline in a dicom scan using a specified structure
Python GNU General Public License v3.0 UpdatedMay 24, 2022 -
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rp_annot Public
Sparse binary data compression
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task_timer Public
Time tasks and save data to a CSV.
Python GNU General Public License v3.0 UpdatedFeb 9, 2022 -
awesome-data-labeling Public
Forked from HumanSignal/awesome-data-labelingA curated list of awesome data labeling tools
UpdatedSep 22, 2021 -
pytorch-gconv-experiments Public
Forked from adambielski/pytorch-gconv-experimentsExperiments with Group Equivariant Convolutions in PyTorch
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batchgenerators Public
Forked from MIC-DKFZ/batchgeneratorsA framework for data augmentation for 2D and 3D image classification and segmentation
Jupyter Notebook Apache License 2.0 UpdatedJul 21, 2021 -
Dicom_RT_and_Images_to_Mask Public
Forked from brianmanderson/Dicom_RT_and_Images_to_MaskVarious utilities created to help with the interpretation of dicom images/RT Structures
Python GNU General Public License v3.0 UpdatedJul 2, 2021 -
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fastai Public
Forked from fastai/fastaiThe fastai deep learning library, plus lessons and tutorials
Jupyter Notebook Apache License 2.0 UpdatedJun 8, 2019 -
tplx-ds Public
Forked from xgoogax/tplx-dsa repo for a recruitment task
Jupyter Notebook UpdatedMay 7, 2018 -
Pytorch-UNet Public
Forked from milesial/Pytorch-UNetPytorch implementation of the U-Net for image semantic segmentation, with dense CRF post-processing
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tensorflow Public
Forked from tensorflow/tensorflowComputation using data flow graphs for scalable machine learning
C++ Apache License 2.0 UpdatedFeb 17, 2018 -
keras Public
Forked from keras-team/kerasDeep Learning for humans
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node-mocks-http Public
Forked from eugef/node-mocks-httpMock 'http' objects for testing Express routing functions
JavaScript Other UpdatedOct 8, 2015 -
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