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Issues: MultiQC/MultiQC

Plot updates 2024
#2407 opened Feb 29, 2024 by ewels
Open
Update template to latest Bootstrap (with dark mode)
#1698 opened Jun 1, 2022 by jfy133
Open 7
MultiQC 2024 tracker
#1784 opened Oct 30, 2022 by ewels
Open
Beta
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199 Open 1,521 Closed
199 Open 1,521 Closed
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Issues list

picard => allow for use of output as sample name
#3182 opened May 8, 2025 by nick-youngblut
Add som.py module module: new
#3178 opened May 1, 2025 by jethror1
1 task done
ylab field in dataset labels is not used bug: core Bug in the main MultiQC code core: front end
#3177 opened Apr 30, 2025 by ryankelley-lm
4 tasks done
v1.29
1
1
Is there a way to change the "theme" for the plotly plots?
#3162 opened Apr 22, 2025 by clintval
AI Summary Custom Client Classes / Greater Flexibility
#3161 opened Apr 18, 2025 by nkuehnle
Add support for parsing fgbio CollectDuplexSeqMetrics output
#3152 opened Apr 7, 2025 by carmelinacharalambous
Add GC Bias and Coverage Distribution Plots to Picard HsMetrics Module
#3151 opened Apr 7, 2025 by carmelinacharalambous
2
10x Flex cellranger output module: enhancement
#3146 opened Apr 4, 2025 by maggiebr0wn
Add support for MEAN_ORIGINAL_QUALITY in Picard MeanQualityByCycle module: enhancement
#3142 opened Mar 31, 2025 by carmelinacharalambous
Custom Content Multi-Dataset Line Graph Dropping Samples?
#3139 opened Mar 29, 2025 by schorlton-bugseq
4 tasks done
1
Ordered Line Graph
#3138 opened Mar 28, 2025 by schorlton-bugseq
4 tasks done
1
Custom Content Ordering Oddness
#3136 opened Mar 28, 2025 by jchorl
Oops! The 'samtools' MultiQC module broke... bug: module Bug in a MultiQC module
#3134 opened Mar 25, 2025 by bferrette
4 tasks done
v1.29
3
Multiqc for ccs with strand-aware ccs_reports module: enhancement
#3126 opened Mar 21, 2025 by ludzkia
Module request: fastplong module: new
#3121 opened Mar 13, 2025 by hkaspersen
1 task done
Generate markdown docs from config JSON schema core: infrastructure Something to do with the MultiQC infra documentation planned
#3119 opened Mar 11, 2025 by ewels
OpenAI model gpt-4-turbo and MultiQC 1.27.1
#3117 opened Mar 5, 2025 by agroppi
4 tasks done
Display more metrics of Picard QualityYieldMetrics in report
#3113 opened Mar 4, 2025 by AldisiRana
SortMeRNA results in General Statistics table is reported for read 2? module: change
#3107 opened Feb 28, 2025 by audrey-bollas
1
Ability to richly filter/sort tables
#3099 opened Feb 24, 2025 by jchorl
Request module for squab counter module: new waiting: example data Needs example data before we can proceed
#3051 opened Jan 20, 2025 by abearab
1 task done
3
Allow fastp module to only display the before_filtering metrics
#2951 opened Nov 6, 2024 by alanhoyle
New module: FASTQE module: new planned
#2944 opened Oct 31, 2024 by adamrtalbot
1 task done
4
Vertical barplot in fastq-screen output
#2919 opened Oct 16, 2024 by aitgon
4 tasks done
Improve custom content documentation documentation
#2853 opened Sep 16, 2024 by vladsavelyev
1
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