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Performance of Existing Predictor of SubCellular Localization of Long Non-Coding RNA on the New Database

Published: 11 January 2021 Publication History

Abstract

Long non-coding RNAs (lncRNAs) have important functions in the regulation of life activities at multiple levels, such as chromatin remodeling, transcriptional and posttranscriptional regulation. They have different functions according to the different locations in the cell. Therefore, it is important to obtain the sub-cellular location information to understand the functions of lncRNAs. However, the biochemical experimental way of sub-cellular localization requires a long period and high cost. Currently, many methods of predicting sub-cellular location based on the machine learning and deep learning have been developed to ease the difficulty in detecting the sub-cellular location. We fetched the latest version RNA database to evaluate the performance of existing predictors, lncLocator and iLoc-lncRNA.

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    ICCPR '20: Proceedings of the 2020 9th International Conference on Computing and Pattern Recognition
    October 2020
    552 pages
    ISBN:9781450387835
    DOI:10.1145/3436369
    Permission to make digital or hard copies of all or part of this work for personal or classroom use is granted without fee provided that copies are not made or distributed for profit or commercial advantage and that copies bear this notice and the full citation on the first page. Copyrights for components of this work owned by others than ACM must be honored. Abstracting with credit is permitted. To copy otherwise, or republish, to post on servers or to redistribute to lists, requires prior specific permission and/or a fee. Request permissions from [email protected]

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    Published: 11 January 2021

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    Author Tags

    1. Long non-coding RNA
    2. prediction
    3. subcellular localization

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