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SkylineSearch: semantic ranking and result visualization for pubmed

Published: 12 June 2011 Publication History

Abstract

Life sciences researchers perform scientific literature search as part of their daily activities. Many such searches are executed against PubMed, a central repository of life sciences articles, and often return hundreds, or even thousands, of results, pointing to the need for data exploration tools. In this demonstration we present SkylineSearch, a semantic ranking and result visualization system designed specifically for PubMed, and available to the scientific community at skyline.cs.columbia.edu. Our system leverages semantic annotations of articles with terms from the MeSH controlled vocabulary, and presents results as a two-dimensional skyline, plotting relevance against publication date. We demonstrate that SkylineSearch supports a richer data exploration experience than does the search functionality of PubMed, allowing users to find relevant references more easily. We also show that SkylineSearch executes queries and presents results in interactive time.

References

[1]
A. Doms and M. Schroeder. Go : Exploring with the GeneOntology. Nucleic Acid Research, 33, 2005.
[2]
J.-J. Kim and D. Rebholz-Schuhmann. Categorization of services for seeking information in biomedical literature: a typology for improvement of practice. Brief Bioinform, 9(6), 2008.
[3]
J. Lee and M. Kim. Information retrieval based on a conceptual distance in is-a hierarchy. J Doc, 49, 1993.
[4]
R. Rada and E. Bicknell. Ranking documents with a thesaurus. JASIS, 40(5), 1989.
[5]
J. Stoyanovich, W. Mee, and K. A. Ross. Semantic ranking and result visualization for life sciences publications. In ICDE, 2010.

Cited By

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  • (2013)Visualizing Search Results of Linked Open DataSemantic Models for Adaptive Interactive Systems10.1007/978-1-4471-5301-6_7(133-149)Online publication date: 2013
  • (2012)Semantics visualization for fostering search result comprehensionProceedings of the 9th international conference on The Semantic Web: research and applications10.1007/978-3-642-30284-8_49(633-646)Online publication date: 27-May-2012

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Published In

cover image ACM Conferences
SIGMOD '11: Proceedings of the 2011 ACM SIGMOD International Conference on Management of data
June 2011
1364 pages
ISBN:9781450306614
DOI:10.1145/1989323

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Association for Computing Machinery

New York, NY, United States

Publication History

Published: 12 June 2011

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Author Tags

  1. data exploration
  2. skyline

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  • Demonstration

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SIGMOD/PODS '11
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Overall Acceptance Rate 785 of 4,003 submissions, 20%

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Cited By

View all
  • (2013)Visualizing Search Results of Linked Open DataSemantic Models for Adaptive Interactive Systems10.1007/978-1-4471-5301-6_7(133-149)Online publication date: 2013
  • (2012)Semantics visualization for fostering search result comprehensionProceedings of the 9th international conference on The Semantic Web: research and applications10.1007/978-3-642-30284-8_49(633-646)Online publication date: 27-May-2012

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