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Adversarial learning with data selection for cross-domain histopathological breast Cancer segmentation

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Abstract

Histopathology plays an important role in the clinical diagnosis of breast diseases. Early diagnosis and adjuvant therapy are of great help to patients. With the development of deep learning, fully convolutional networks (FCNs) have achieved remarkable results in the field of segmentation. However, this approach suffers from obtaining sufficient labelled data and underperforms when it comes to a new domain. Recently, adversarial learning becomes prevalent in domain adaptation, which is able to transfer learned knowledge between domains and greatly reduces the workload of labeling. In this paper, we propose a new domain adaptation method, which consists of three steps: adversarial learning, data selection and pseudo-label model refinement. Our method combines the advantages of adversarial learning and pseudo-labelling for domain adaptation. We also introduce a new data selection method to select target domain data with their pseudo-label for model refinement, considering prediction confidence and representativeness, which further strengths the model capability in target domain. We evaluate our method on private HE- and IHC-stained datasets. In order to strength the robustness, the color augmentation is utilized in this paper, the cross-domain prediction performance has been improved from 0.213 Dice to 0.703 Dice. The experimental results show that with only using unlabeled data, the proposed method can achieve 0.846 Dice on target domain, which outperforms the state-of-the-art method by 1.8%.

Highlights

  • The dataset is standard collected and labeled by the professional cooperative doctors and hospital, which means the dataset has a high research and reference value.

  • The influence of color disturbance on the training effect of segmentation network is analyzed, and gave a through study to this problem.

  • Domain-adaptive method was utilized to relieve the scarcity of data caused cross-domain histopathological segmentation problem, and achieved remarkable performance on cross-domain breast cancer segmentation.

  • In order to ensure the data has a highly reliability, an entropy sorting-based data sorting method is proposed.

  • A representative selection method is proposed to select the high representativeness and reference data, which can make our proposed network achieve enough discriminative and robustness.

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Acknowledgements

This research was funded by National Natural Science Foundation of China, grant number 62066027.

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Authors and Affiliations

  1. School of Information Engineering, Nanchang University, Nanchang, 330031, People’s Republic of China

    Zhenrong Lin, Jidong Li, Qipeng Yao & Lihang Wan

  2. AI Lab, Tencent, Shenzhen, 518000, People’s Republic of China

    Haocheng Shen

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  1. Zhenrong Lin
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Correspondence to Qipeng Yao.

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Lin, Z., Li, J., Yao, Q. et al. Adversarial learning with data selection for cross-domain histopathological breast Cancer segmentation. Multimed Tools Appl 81, 5989–6008 (2022). https://doi.org/10.1007/s11042-021-11814-y

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