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Workflow Integration of Research AI Tools into a Hospital Radiology Rapid Prototyping Environment

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Abstract

The field of artificial intelligence (AI) in medical imaging is undergoing explosive growth, and Radiology is a prime target for innovation. The American College of Radiology Data Science Institute has identified more than 240 specific use cases where AI could be used to improve clinical practice. In this context, thousands of potential methods are developed by research labs and industry innovators. Deploying AI tools within a clinical enterprise, even on limited retrospective evaluation, is complicated by security and privacy concerns. Thus, innovation must be weighed against the substantive resources required for local clinical evaluation. To reduce barriers to AI validation while maintaining rigorous security and privacy standards, we developed the AI Imaging Incubator. The AI Imaging Incubator serves as a DICOM storage destination within a clinical enterprise where images can be directed for novel research evaluation under Institutional Review Board approval. AI Imaging Incubator is controlled by a secure HIPAA-compliant front end and provides access to a menu of AI procedures captured within network-isolated containers. Results are served via a secure website that supports research and clinical data formats. Deployment of new AI approaches within this system is streamlined through a standardized application programming interface. This manuscript presents case studies of the AI Imaging Incubator applied to randomizing lung biopsies on chest CT, liver fat assessment on abdomen CT, and brain volumetry on head MRI.

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Source: Adapted from [33, 34]

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References

  1. A. S. Lundervold and A. Lundervold, "An overview of deep learning in medical imaging focusing on MRI," Zeitschrift für Medizinische Physik, vol. 29, no. 2, pp. 102-127, 2019.

    Article  PubMed  Google Scholar 

  2. D. Ribli, A. Horváth, Z. Unger, P. Pollner, and I. Csabai, "Detecting and classifying lesions in mammograms with deep learning," Scientific reports, vol. 8, no. 1, pp. 1-7, 2018.

    Article  CAS  Google Scholar 

  3. M. R. Arbabshirani et al., "Advanced machine learning in action: identification of intracranial hemorrhage on computed tomography scans of the head with clinical workflow integration," NPJ digital medicine, vol. 1, no. 1, pp. 1-7, 2018.

    Article  Google Scholar 

  4. O. Stephen, M. Sain, U. J. Maduh, and D.-U. Jeong, "An efficient deep learning approach to pneumonia classification in healthcare," Journal of healthcare engineering, vol. 2019, 2019.

  5. K. E. Henry, D. N. Hager, P. J. Pronovost, and S. Saria, "A targeted real-time early warning score (TREWScore) for septic shock," Science translational medicine, vol. 7, no. 299, pp. 299ra122–299ra122, 2015.

  6. Y. Jun et al., "Deep-learned 3D black-blood imaging using automatic labelling technique and 3D convolutional neural networks for detecting metastatic brain tumors," Scientific reports, vol. 8, no. 1, pp. 1-11, 2018.

    Google Scholar 

  7. P. Chang et al., "Deep-learning convolutional neural networks accurately classify genetic mutations in gliomas," American Journal of Neuroradiology, vol. 39, no. 7, pp. 1201-1207, 2018.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  8. N. Yamanakkanavar, J. Y. Choi, and B. Lee, "MRI segmentation and classification of human brain using deep learning for diagnosis of alzheimer’s disease: a survey," Sensors, vol. 20, no. 11, p. 3243, 2020.

    Article  PubMed Central  Google Scholar 

  9. Y. Ding et al., "A deep learning model to predict a diagnosis of Alzheimer disease by using 18F-FDG PET of the brain," Radiology, vol. 290, no. 2, pp. 456-464, 2019.

    Article  PubMed  Google Scholar 

  10. S. Grover, S. Bhartia, A. Yadav, and K. Seeja, "Predicting severity of Parkinson’s disease using deep learning," Procedia computer science, vol. 132, pp. 1788-1794, 2018.

    Article  Google Scholar 

  11. S. Zhang, S. K. Poon, K. Vuong, A. Sneddon, and C. T. Loy, "A deep learning-based approach for gait analysis in Huntington disease," in MEDINFO 2019: Health and Wellbeing e-Networks for All: IOS Press, 2019, pp. 477-481.

  12. J. Yuan et al., "Machine Learning Applications on Neuroimaging for Diagnosis and Prognosis of Epilepsy: A Review," arXiv preprint arXiv:2102.03336, 2021.

  13. S. Gaj, D. Ontaneda, and K. Nakamura, "Automatic segmentation of gadolinium-enhancing lesions in multiple sclerosis using deep learning from clinical MRI," PloS one, vol. 16, no. 9, p. e0255939, 2021.

  14. Y.-W. Chang, S.-J. Tsai, Y.-F. Wu, and A. C. Yang, "Development of an Al-Based Web Diagnostic System for Phenotyping Psychiatric Disorders," Frontiers in Psychiatry, vol. 11, 2020.

  15. N. Thomas et al., "Fully Automated End-to-End Neuroimaging Workflow for Mental Health Screening," in 2020 IEEE 20th International Conference on Bioinformatics and Bioengineering (BIBE), 2020: IEEE, pp. 642–647.

  16. F. a. D. Administration, "Proposed regulatory framework for modifications to artificial intelligence/machine learning (AI/ML)-based software as a medical device (SaMD)," ed: Discussion paper and request for feedback, 2019.

  17. T. J. Hwang, A. S. Kesselheim, and K. N. Vokinger, "Lifecycle regulation of artificial intelligence–and machine learning–based software devices in medicine," Jama, vol. 322, no. 23, pp. 2285-2286, 2019.

    Article  PubMed  Google Scholar 

  18. F. a. D. Administration. "510(k) Premarket Notification." https://www.accessdata.fda.gov/scripts/cdrh/cfdocs/cfpmn/pmn.cfm?ID=K200717 (accessed Nov 9 2021, 2021).

  19. F. a. D. Administration. "Medical Devices Database." https://www.fda.gov/medical-devices/device-advice-comprehensive-regulatory-assistance/medical-device-databases (accessed Nov 9 2021, 2021).

  20. J. Powles and H. Hodson, "Google DeepMind and healthcare in an age of algorithms," Health and technology, vol. 7, no. 4, pp. 351-367, 2017.

    Article  PubMed  PubMed Central  Google Scholar 

  21. K. Abouelmehdi, A. Beni-Hessane, and H. Khaloufi, "Big healthcare data: preserving security and privacy," Journal of Big Data, vol. 5, no. 1, pp. 1-18, 2018.

    Article  Google Scholar 

  22. P. Balthazar, P. Harri, A. Prater, and N. M. Safdar, "Protecting your patients’ interests in the era of big data, artificial intelligence, and predictive analytics," Journal of the American College of Radiology, vol. 15, no. 3, pp. 580-586, 2018.

    Article  PubMed  Google Scholar 

  23. J. Scherer et al., "Joint Imaging Platform for Federated Clinical Data Analytics," JCO Clinical Cancer Informatics, vol. 4, pp. 1027-1038, 2020.

    Article  PubMed  Google Scholar 

  24. Y. Huo et al., "Fully automatic liver attenuation estimation combing CNN segmentation and morphological operations," Medical physics, vol. 46, no. 8, pp. 3508-3519, 2019.

    Article  CAS  PubMed  Google Scholar 

  25. Y. Huo et al., "3D whole brain segmentation using spatially localized atlas network tiles," NeuroImage, vol. 194, pp. 105-119, 2019.

    Article  PubMed  Google Scholar 

  26. K. Yan et al., "MULAN: multitask universal lesion analysis network for joint lesion detection, tagging, and segmentation," in International Conference on Medical Image Computing and Computer-Assisted Intervention, 2019: Springer, pp. 194-202.

    Google Scholar 

  27. G. D. P. Regulation, "Regulation EU 2016/679 of the European Parliament and of the Council of 27 April 2016," Official Journal of the European Union. Available at: http://ec. europa. eu/justice/data-protection/reform/files/regulation_oj_en. pdf (accessed 20 September 2017), 2016.

  28. "Health Insurance Portability and Accountability Act of 1996," ed. United Status, 1996, p. 2019.

  29. C. J. Kelly, A. Karthikesalingam, M. Suleyman, G. Corrado, and D. King, "Key challenges for delivering clinical impact with artificial intelligence," BMC medicine, vol. 17, no. 1, pp. 1-9, 2019.

    Article  CAS  Google Scholar 

  30. C. Anderson, "Docker [software engineering]," Ieee Software, vol. 32, no. 3, pp. 102-c3, 2015.

    Article  Google Scholar 

  31. G. M. Kurtzer, V. Sochat, and M. W. Bauer, "Singularity: Scientific containers for mobility of compute," PloS one, vol. 12, no. 5, p. e0177459, 2017.

  32. FreePik. "Mail Alert free icon." https://www.flaticon.com/free-icon/mail-alert_81488 (accessed Nov 20 2021).

  33. DinosoftLabs. "Mri free icon." https://www.flaticon.com/free-icon/mri_504197# (accessed Nov 20 2021).

  34. D.-J. Design. "Database active icon." https://iconarchive.com/show/ravenna-3d-icons-by-double-j-design/Database-Active-icon.html (accessed Nov 20 2021).

  35. P. A. Harris, R. Taylor, R. Thielke, J. Payne, N. Gonzalez, and J. G. Conde, "Research electronic data capture (REDCap)—a metadata-driven methodology and workflow process for providing translational research informatics support," Journal of biomedical informatics, vol. 42, no. 2, pp. 377-381, 2009.

    Article  PubMed  Google Scholar 

  36. A. Klein, T. Dal Canton, S. S. Ghosh, B. Landman, J. Lee, and A. Worth, "Open labels: online feedback for a public resource of manually labeled brain images," in 16th Annual Meeting for the Organization of Human Brain Mapping, 2010, vol. 84358.

  37. K. J. Gorgolewski et al., "The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments," Scientific data, vol. 3, no. 1, pp. 1-9, 2016.

    Article  Google Scholar 

  38. E. D. C. Castor. "Castor Electronic Data Capture." https://castoredc.com (accessed August 28, 2019.

  39. M. Cavelaars et al., "OpenClinica," in Journal of clinical bioinformatics, 2015, vol. 5, no. 1: Springer, pp. 1–2.

  40. E. Dikici, M. Bigelow, L. M. Prevedello, R. D. White, and B. S. Erdal, "Integrating AI into radiology workflow: levels of research, production, and feedback maturity," Journal of Medical Imaging, vol. 7, no. 1, p. 016502, 2020.

  41. K. Juluru et al., "Building Blocks for Integrating Image Analysis Algorithms into a Clinical Workflow," medRxiv, 2020.

  42. J. Jones. "Integrating AI into the Clinical Workflow." https://www.acr.org/-/media/ACR/Files/Case-Studies/V7_Integrating-AI.pdf (accessed 10 Nov 2021, 2021).

  43. C. Boettiger, "An introduction to Docker for reproducible research," ACM SIGOPS Operating Systems Review, vol. 49, no. 1, pp. 71-79, 2015.

    Article  Google Scholar 

  44. P. Xu, S. Shi, and X. Chu, "Performance evaluation of deep learning tools in docker containers," in 2017 3rd International Conference on Big Data Computing and Communications (BIGCOM), 2017: IEEE, pp. 395–403.

  45. Y. Huang, K. cai, R. Zong, and Y. Mao, "Design and implementation of an edge computing platform architecture using docker and kubernetes for machine learning," in Proceedings of the 3rd International Conference on High Performance Compilation, Computing and Communications, 2019, pp. 29–32.

  46. S. Reddy, S. Allan, S. Coghlan, and P. Cooper, "A governance model for the application of AI in health care," Journal of the American Medical Informatics Association, vol. 27, no. 3, pp. 491-497, 2020.

    Article  PubMed  Google Scholar 

  47. I. Baltruschat et al., "Smart chest X-ray worklist prioritization using artificial intelligence: a clinical workflow simulation," European radiology, vol. 31, no. 6, pp. 3837-3845, 2021.

    Article  PubMed  Google Scholar 

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Funding

The pilot funding for this project is hosted by VUMC under RadX Innovation Challenge. The ImageVU resource described was supported by CTSA award No. UL1 TR002243 from the National Center for Advancing Translational Sciences. The Institutional award that supported liver AI is ESS Innovation Challenge Support through VUMC Internal Funding.

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Correspondence to Praitayini Kanakaraj.

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Kanakaraj, P., Ramadass, K., Bao, S. et al. Workflow Integration of Research AI Tools into a Hospital Radiology Rapid Prototyping Environment. J Digit Imaging 35, 1023–1033 (2022). https://doi.org/10.1007/s10278-022-00601-2

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