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Properties of a General Measure of Configuration Agreement

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Algorithms from and for Nature and Life
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Abstract

Variants of the Rand index of clustering agreement have been used to measure agreement between spatial configurations of points (Akkucuk 2004; Akkucuk and Carroll 2006; Chen 2006; Chen and Buja 2009). For these measures, the k-nearest neighbors of each point are compared across configurations. The agreement measure can be generalized across multiple values of k (France and Carroll 2007). The generalized agreement metric is denoted as ψ. In this paper, we further generalize ψ to the case of more than two configurations. We develop a partial agreement measure as a neighborhood agreement equivalent of the partial correlation coefficient. We demonstrate the use of ψ and partial ψ using an illustrative example. (MATLAB implementations of routines for calculating ψ and partial ψ are available at https://sites.google.com/site/psychminegroup/.)

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Correspondence to Stephen L. France .

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France, S.L. (2013). Properties of a General Measure of Configuration Agreement. In: Lausen, B., Van den Poel, D., Ultsch, A. (eds) Algorithms from and for Nature and Life. Studies in Classification, Data Analysis, and Knowledge Organization. Springer, Cham. https://doi.org/10.1007/978-3-319-00035-0_15

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