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AirwayFormer: Structure-Aware Boundary-Adaptive Transformers for Airway Anatomical Labeling

  • Conference paper
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Medical Image Computing and Computer Assisted Intervention – MICCAI 2023 (MICCAI 2023)

Part of the book series: Lecture Notes in Computer Science ((LNCS,volume 14226))

Abstract

Pulmonary airway labeling identifies anatomical names for branches in bronchial trees. These fine-grained labels are critical for disease diagnosis and intra-operative navigation. Recently, various methods have been proposed for this task. However, accurate labeling of each bronchus is challenging due to the fine-grained categories and inter-individual variations. On the one hand, training a network with limited data to recognize multitudinous classes sets an obstacle to the design of algorithms. We propose to maximize the use of latent relationships by a transformer-based network. Neighborhood information is properly integrated to capture the priors in the tree structure, while a U-shape layout is introduced to exploit the correspondence between different nomenclature levels. On the other hand, individual variations cause the distribution overlapping of adjacent classes in feature space. To resolve the confusion between sibling categories, we present a novel generator that predicts the weight matrix of the classifier to produce dynamic decision boundaries between subsegmental classes. Extensive experiments performed on publicly available datasets demonstrate that our method can perform better than state-of-the-art methods. The code is publicly available at https://github.com/EndoluminalSurgicalVision-IMR/AirwayFormer.

This work was partly supported by National Key R &D Program of China (2019YFB1311503, 2017YFC0112700), Committee of Science and Technology, Shanghai, China (19510711200), Shanghai Sailing Program (20YF1420800), NSFC (61661010, 61977046, 62003208), SJTU Trans-med Awards Research (20210101), Science and Technology Commission of Shanghai Municipality (20DZ2220400).

W. Yu and H. Zheng—Equal contribution.

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Notes

  1. 1.

    https://github.com/yuyouxixi/airway-labeling/tree/main/dataset.

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Correspondence to Yun Gu or Jie Yang .

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Yu, W., Zheng, H., Gu, Y., Xie, F., Sun, J., Yang, J. (2023). AirwayFormer: Structure-Aware Boundary-Adaptive Transformers for Airway Anatomical Labeling. In: Greenspan, H., et al. Medical Image Computing and Computer Assisted Intervention – MICCAI 2023. MICCAI 2023. Lecture Notes in Computer Science, vol 14226. Springer, Cham. https://doi.org/10.1007/978-3-031-43990-2_37

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  • DOI: https://doi.org/10.1007/978-3-031-43990-2_37

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