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High-Resolution Hierarchical Adversarial Learning for OCT Speckle Noise Reduction

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Medical Image Computing and Computer Assisted Intervention – MICCAI 2021 (MICCAI 2021)

Abstract

Raw optical coherence tomography (OCT) images typically are of low quality because speckle noise blurs retinal structures, severely compromising visual quality and degrading performances of subsequent image analysis tasks. In this paper, we propose a novel end-to-end cross-domain denoising framework for speckle noise suppression. We utilize high quality ground truth datasets produced by several commercial OCT scanners for training, and apply the trained model to datasets collected by our in-house OCT scanner for denoising. Our model uses the high-resolution network (HRNet) as backbone, which maintains high-resolution representations during the entire learning process to restore high fidelity images. In addition, we develop a hierarchical adversarial learning strategy for domain adaption to align distribution shift among datasets collected by different scanners. Experimental results show that the proposed model outperformed all the competing state-of-the-art methods. As compared to the best of our previous method, the proposed model improved the signal to noise ratio (SNR) metric by a huge margin of \(18.13\,\mathrm dB\) and only required \(25\,\mathrm ms\) for denoising one image in testing phase, achieving the real-time processing capability for the in-house OCT scanner.

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References

  1. Aum, J., Kim, J.h., Jeong, J.: Effective speckle noise suppression in optical coherence tomography images using nonlocal means denoising filter with double gaussian anisotropic kernels. Appl. Opt. 54(13), D43–D50 (2015)

    Google Scholar 

  2. Cameron, A., Lui, D., Boroomand, A., Glaister, J., Wong, A., Bizheva, K.: Stochastic speckle noise compensation in optical coherence tomography using non-stationary spline-based speckle noise modelling. Biomed. Opt. Express 4(9), 1769–1785 (2013)

    Article  Google Scholar 

  3. Cheng, J., Tao, D., Quan, Y., Wong, D.W.K., Cheung, G.C.M., Akiba, M., Liu, J.: Speckle reduction in 3d optical coherence tomography of retina by a-scan reconstruction. IEEE Trans. Med. Imag. 35(10), 2270–2279 (2016)

    Article  Google Scholar 

  4. Chong, B., Zhu, Y.K.: Speckle reduction in optical coherence tomography images of human finger skin by wavelet modified BM 3D filter. Opt. Commun. 291, 461–469 (2013)

    Article  Google Scholar 

  5. Dong, W., Wang, P., Yin, W., Shi, G., Wu, F., Lu, X.: Denoising prior driven deep neural network for image restoration. IEEE Trans. Patt. Anal. Mach. Intel. 41(10), 2305–2318 (2018)

    Article  Google Scholar 

  6. Fang, L., Li, S., Cunefare, D., Farsiu, S.: Segmentation based sparse reconstruction of optical coherence tomography images. IEEE Trans. Med. Imag. 36(2), 407–421 (2016)

    Article  Google Scholar 

  7. Isola, P., Zhu, J.Y., Zhou, T., Efros, A.A.: Image-to-image translation with conditional adversarial networks. In: Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, pp. 1125–1134 (2017)

    Google Scholar 

  8. Kafieh, R., Rabbani, H., Selesnick, I.: Three dimensional data-driven multi scale atomic representation of optical coherence tomography. IEEE Trans. Med. Imag. 34(5), 1042–1062 (2014)

    Article  Google Scholar 

  9. Li, M., Idoughi, R., Choudhury, B., Heidrich, W.: Statistical model for oct image denoising. Biomed. Opt. Exp. 8(9), 3903–3917 (2017)

    Article  Google Scholar 

  10. Ma, Y., Chen, X., Zhu, W., Cheng, X., Xiang, D., Shi, F.: Speckle noise reduction in optical coherence tomography images based on edge-sensitive CCAN. Biomed. Opt. Exp. 9(11), 5129–5146 (2018)

    Article  Google Scholar 

  11. Ronneberger, O., Fischer, P., Brox, T.: U-net: Convolutional networks for biomedical image segmentation. U-Net: convolutional networks for biomedical image segmentation. In: Navab, N., Hornegger, J., Wells, W., Frangi, A. (eds.) Medical Image Computing and Computer-Assisted Intervention (MICCAI 2015) LNCS, vol . 9351, pp. 234–241. Springer, Cham (2015). https://doi.org/10.1007/978-3-319-24574-4_28

  12. Wang, J., et al.: Deep high-resolution representation learning for visual recognition. In: IEEE Transactions on Pattern Analysis and Machine Intelligence, pp. 1–1 (2020). https://doi.org/10.1109/TPAMI.2020.2983686

  13. Wen, B., Li, Y., Bresler, Y.: When sparsity meets low-rankness: transform learning with non-local low-rank constraint for image restoration. In: 2017 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP), pp. 2297–2301. IEEE (2017)

    Google Scholar 

  14. Wojtkowski, M., et al.: In vivo human retinal imaging by Fourier domain optical coherence tomography. J. Biomed. Opt. 7(3), 457–463 (2002)

    Google Scholar 

  15. Xue, Y., Feng, S., Zhang, Y., Zhang, X., Wang, Y.: Dual-task self-supervision for cross-modality domain adaptation. In: Martel, A.L., et al. (eds.) MICCAI 2020. LNCS, vol. 12261, pp. 408–417. Springer, Cham (2020). https://doi.org/10.1007/978-3-030-59710-8_40

    Chapter  Google Scholar 

  16. Zhang, K., Zuo, W., Chen, Y., Meng, D., Zhang, L.: Beyond a gaussian denoiser: residual learning of deep CNN for image denoising. IEEE Trans. Image Process. 26(7), 3142–3155 (2017)

    Article  MathSciNet  MATH  Google Scholar 

  17. Zhou, Y., et al.: Speckle noise reduction for oct images based on image style transfer and conditional CAN. IEEE J. Biomed. Health Inform. (2021). https://doi.org/10.1109/JBHI.2021.3074852

    Article  Google Scholar 

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Correspondence to Xinjian Chen .

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Zhou, Y. et al. (2021). High-Resolution Hierarchical Adversarial Learning for OCT Speckle Noise Reduction. In: de Bruijne, M., et al. Medical Image Computing and Computer Assisted Intervention – MICCAI 2021. MICCAI 2021. Lecture Notes in Computer Science(), vol 12906. Springer, Cham. https://doi.org/10.1007/978-3-030-87231-1_36

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  • DOI: https://doi.org/10.1007/978-3-030-87231-1_36

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  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-030-87230-4

  • Online ISBN: 978-3-030-87231-1

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