Abstract
Endoscopic measurement of ulcerative colitis (UC) severity is important since endoscopic disease severity may better predict future outcomes in UC than symptoms. However, it is difficult to evaluate the endoscopic severity of UC objectively because of the non-uniform nature of endoscopic features associated with UC, and large variations in their patterns. In this paper, we propose a method to classify UC severity in colonoscopy videos by detecting the vascular (vein) patterns which are defined specifically in this paper as the amounts of blood vessels in the video frames. To detect these vascular patterns, we use Convolutional Neural Network (CNN) and image preprocessing methods. The experiments show that the proposed method for classifying UC severity by detecting these vascular patterns increases classification effectiveness significantly.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
Similar content being viewed by others
References
U.S. National Library of Medicine: Ulcerative colitis. https://ghr.nlm.nih.gov/condition/ulcerative-colitis. Accessed 04 Apr 2020
Xie, T., et al.: Ulcerative Colitis Endoscopic Index of Severity (UCEIS) versus Mayo Endoscopic Score (MES) in guiding the need for colectomy in patients with acute severe colitis. Gastroenterol. Rep. 6(1), 38–44 (2018)
Paine, E.: Colonoscopic evaluation in ulcerative colitis. Gastroenterol. Rep. 2(3), 161–168 (2014)
D’Haens, G., et al.: A review of activity indices and efficacy end points for clinical trials of medical therapy in adults with ulcerative colitis. Gastroenterology 132(2), 763–786 (2007)
Kappelman, M.D., Rifas-Shiman, S.L., Kleinman, K., et al.: The prevalence and geographic distribution of Crohn’s disease and ulcerative colitis in the United States. Clin. Gastroenterol. Hepatol. 5(12), 1424–1429 (2007)
Rutter, M., Saunders, B., et al.: Severity of inflammation is a risk factor for colorectal neoplasia in ulcerative colitis. Gastroenterology 126(2), 451–459 (2004)
Nosato, H., Sakanashi, H., Takahashi, E., Murakawa, M.: An objective evaluation method of ulcerative colitis with optical colonoscopy images based on higher order local auto-correlation features. In: 2014 IEEE 11th International Symposium on Biomedical Imaging (ISBI), pp. 89–92. IEEE (2014)
Tejaswini, S.V.L.L., Mittal, B., Oh, J., Tavanapong, W., Wong, J., de Groen, P.C.: Enhanced approach for classification of ulcerative colitis severity in colonoscopy videos using CNN. In: Bebis, G., et al. (eds.) ISVC 2019. LNCS, vol. 11845, pp. 25–37. Springer, Cham (2019). https://doi.org/10.1007/978-3-030-33723-0_3
Alammari, A., Islam, A.R., Oh, J., Tavanapong, W., Wong, J., De Groen, P.C.: Classification of ulcerative colitis severity in colonoscopy videos using CNN. In: Proceedings of the 9th International Conference on Information Management and Engineering, Barcelona, Spain, pp. 139–144 (2017)
Stidham, R.W., et al.: Performance of a deep learning model vs human reviewers in grading endoscopic disease severity of patients with ulcerative colitis. JAMA Netw. Open 2(5), e193963 (2019)
Ozawa, T., et al.: Novel computer-assisted diagnosis system for endoscopic disease activity in patients with ulcerative colitis. Gastrointest. Endosc. 89(2), 416–421 (2019)
Fan, L., Zhang, F., Fan, H., Zhang, C.: Brief review of image denoising techniques. Vis. Comput. Ind. Biomed. Art 2(1) (2019). Article number: 7. https://doi.org/10.1186/s42492-019-0016-7
Lo, S.C., Lou, S.L., Lin, J.S., Freedman, M.T., Chien, M.V., Mun, S.K.: Artificial convolution neural network techniques and applications for lung nodule detection. IEEE Trans. Med. Imaging 14(4), 711–718 (1995)
Ramasubramanian, K., Singh, A.: Deep learning using Keras and TensorFlow. In: Machine Learning Using R, pp. 667–688. Apress, Berkeley (2019)
Abadi, M., et al.: TensorFlow: large-scale machine learning on heterogeneous distributed systems. arXiv preprint arXiv:1603.04467 (2016)
Gilpin, L.H., Bau, D., Yuan, B.Z., Bajwa, A., Specter, M., Kagal, L.: Explaining explanations: an overview of interpretability of machine learning. In: 2018 IEEE 5th International Conference on Data Science and Advanced Analytics (DSAA), pp. 80–89 (2018)
He, K., Gkioxari, G., Dollár, P., Girshick, R.: Mask R-CNN. In: Proceedings of the IEEE International Conference on Computer Vision, pp. 2961–2969 (2017)
Zhang, W., Tang, P., Zhao, L.: Remote sensing image scene classification using CNN-CapsNet. Remote Sens. 11(5), 494 (2019)
Turan, M., Almalioglu, Y., Araujo, H., Konukoglu, E., Sitti, M.: Deep EndoVO: a recurrent convolutional neural network (RCNN) based visual odometry approach for endoscopic capsule robots. Neurocomputing 275, 1861–1870 (2017)
Liskowski, P., Krawiec, K.: Segmenting retinal blood vessels with deep neural networks. IEEE Trans. Med. Imaging 35(11), 2369–2380 (2016)
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2020 Springer Nature Switzerland AG
About this paper
Cite this paper
Mokter, M.F., Oh, J., Tavanapong, W., Wong, J., de Groen, P.C. (2020). Classification of Ulcerative Colitis Severity in Colonoscopy Videos Using Vascular Pattern Detection. In: Liu, M., Yan, P., Lian, C., Cao, X. (eds) Machine Learning in Medical Imaging. MLMI 2020. Lecture Notes in Computer Science(), vol 12436. Springer, Cham. https://doi.org/10.1007/978-3-030-59861-7_56
Download citation
DOI: https://doi.org/10.1007/978-3-030-59861-7_56
Published:
Publisher Name: Springer, Cham
Print ISBN: 978-3-030-59860-0
Online ISBN: 978-3-030-59861-7
eBook Packages: Computer ScienceComputer Science (R0)