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Raquel Cardoso de Melo Minardi
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- affiliation: Federal University of Minas Gerais, Department of Computer Science
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2020 – today
- 2024
- [c24]Lucas Moraes dos Santos, Diego C. B. Mariano, Raquel Cardoso de Melo Minardi:
ViPeC: Vision transformer-based approach for Peptide-protein interface Classification. CIBCB 2024: 1-8 - 2023
- [j20]Diego C. B. Mariano, Néli José da Fonseca Jr., Lucianna Helene Santos, Raquel Cardoso de Melo Minardi:
Editorial: Bioinformatics in the age of data science: algorithms, methods, and tools applied from Omics to structural data. Frontiers Bioinform. 3 (2023) - [j19]Pedro Martins, Diego C. B. Mariano, Frederico Chaves Carvalho, Luana Luiza Bastos, Lucas Moraes, Vivian Morais Paixão, Raquel Cardoso de Melo Minardi:
Propedia v2.3: A novel representation approach for the peptide-protein interaction database using graph-based structural signatures. Frontiers Bioinform. 3 (2023) - [j18]Elvira C. A. Horácio
, Lucas M. de Carvalho
Know-how of holding a Bioinformatics competition: Structure, model, overview, and perspectives. PLoS Comput. Biol. 19(12) (2023) - [c23]Frederico Chaves Carvalho
Using Natural Language Processing for Context Identification in COVID-19 Literature. BSB 2023: 70-81 - [c22]Lucas Moraes dos Santos
Peptide-Protein Interface Classification Using Convolutional Neural Networks. BSB 2023: 112-122 - [e2]Marcelo da Silva Reis
Advances in Bioinformatics and Computational Biology - 16th Brazilian Symposium on Bioinformatics, BSB 2023, Curitiba, Brazil, June 13-16, 2023, Proceedings. Lecture Notes in Computer Science 13954, Springer 2023, ISBN 978-3-031-42714-5 [contents] - 2022
- [j17]Vinícius de Almeida Paiva
Protein structural bioinformatics: An overview. Comput. Biol. Medicine 147: 105695 (2022) - [j16]Alexandre V. Fassio
Prioritizing Virtual Screening with Interpretable Interaction Fingerprints. J. Chem. Inf. Model. 62(18): 4300-4318 (2022) - [j15]Charles Abreu Santana, Sandro C. Izidoro
GRaSP-web: a machine learning strategy to predict binding sites based on residue neighborhood graphs. Nucleic Acids Res. 50(W1): 392-397 (2022) - [c21]Lucas Moraes dos Santos
Identifying Large Scale Conformational Changes in Proteins Through Distance Maps and Convolutional Networks. BSB 2022: 56-67 - [c20]Vivian Morais Paixão
Computational Methodology for Discovery of Potential Inhibitory Peptides. BSB 2022: 91-96 - [e1]Nicole M. Scherer
Advances in Bioinformatics and Computational Biology - 15th Brazilian Symposium on Bioinformatics, BSB 2022, Buzios, Brazil, September 21-23, 2022, Proceedings. Lecture Notes in Computer Science 13523, Springer 2022, ISBN 978-3-031-21174-4 [contents] - 2021
- [j14]Pedro M. Martins
Propedia: a database for protein-peptide identification based on a hybrid clustering algorithm. BMC Bioinform. 22(1): 1 (2021) - [j13]Vitor Pimentel, Diego C. B. Mariano, Letícia Xavier Silva Cantão, Luana Luiza Bastos, Pedro H. C. Fischer, Leonardo Henrique Franca de Lima, Alexandre Victor Fassio, Raquel Cardoso de Melo Minardi:
VTR: A Web Tool for Identifying Analogous Contacts on Protein Structures and Their Complexes. Frontiers Bioinform. 1 (2021) - [j12]Alessandra Lima da Silva
From In-Person to the Online World: Insights Into Organizing Events in Bioinformatics. Frontiers Bioinform. 1 (2021) - 2020
- [j11]José Renato M. S. Barroso, Diego C. B. Mariano
Proteus: An algorithm for proposing stabilizing mutation pairs based on interactions observed in known protein 3D structures. BMC Bioinform. 21(1): 275 (2020) - [j10]Alexandre V. Fassio
nAPOLI: A Graph-Based Strategy to Detect and Visualize Conserved Protein-Ligand Interactions in Large-Scale. IEEE ACM Trans. Comput. Biol. Bioinform. 17(4): 1317-1328 (2020) - [c19]Diego C. B. Mariano
A Brief History of Bioinformatics Told by Data Visualization. BSB 2020: 235-246
2010 – 2019
- 2019
- [j9]Marcos Felipe Martins Silva, Pedro M. Martins
Proteingo: Motivation, user experience, and learning of molecular interactions in biological complexes. Entertain. Comput. 29: 31-42 (2019) - [c18]João Arthur F. Gadelha Campelo, Cleiton Rodrigues Monteiro, Carlos Henrique da Silveira, Sabrina de Azevedo Silveira, Raquel Cardoso de Melo Minardi
Protein Structural Signatures Revisited: Geometric Linearity of Main Chains are More Relevant to Classification Performance than Packing of Residues. IWBBIO (1) 2019: 391-402 - 2018
- [c17]Alexandre V. Fassio
An Interactive Strategy to Visualize Common Subgraphs in Protein-Ligand Interaction. IWBBIO (1) 2018: 383-394 - [c16]Pedro M. Martins
How to compute protein residue contacts more accurately? SAC 2018: 60-67 - 2017
- [j8]Alexandre V. Fassio
Vermont: a multi-perspective visual interactive platform for mutational analysis. BMC Bioinform. 18(S-10): 51-63 (2017) - [c15]Susana Medina G.
CALI: A Novel Visual Model for Frequent Pattern Mining in Protein-Ligand Graphs. BIBE 2017: 352-358 - [c14]Geraldo Ribeiro Franciscani, Rodrygo L. T. Santos, Michel Boaventura, Pedro Dalla Bernardina, Wagner Meira Jr., Raquel Cardoso de Melo Minardi
Experimental Evaluation of Crowdsourcing on the Characterization of Data Visualization Techniques. BRACIS 2017: 432-437 - [c13]Sagar Sen
Portinari: A Data Exploration Tool to Personalize Cervical Cancer Screening. ICSE-SEIS 2017: 37-46 - [i1]Sagar Sen, Manoel Horta Ribeiro, Raquel Cardoso de Melo Minardi, Wagner Meira Jr., Mari Nygård:
Portinari: A Data Exploration Tool to Personalize Cervical Cancer Screening. CoRR abs/1704.00172 (2017) - 2016
- [j7]Elisa Boari de Lima, Wagner Meira Jr., Raquel Cardoso de Melo Minardi:
Isofunctional Protein Subfamily Detection Using Data Integration and Spectral Clustering. PLoS Comput. Biol. 12(6) (2016) - [c12]Charles Abreu Santana, Fabio Ribeiro Cerqueira, Carlos Henrique da Silveira
GReMLIN: A Graph Mining Strategy to Infer Protein-Ligand Interaction Patterns. BIBE 2016: 28-35 - [c11]Matheus Lima Diniz Araújo, Iuro B. P. Nascimento
Emotional Fingerprint from Authors in Classical Literature. WebMedia 2016: 263-270 - 2015
- [j6]Sandro C. Izidoro
GASS: identifying enzyme active sites with genetic algorithms. Bioinform. 31(6): 864-870 (2015) - [j5]Wellisson R. S. Gonçalves, Valdete M. Gonçalves-Almeida, Aleksander L. Arruda, Wagner Meira Jr., Carlos Henrique da Silveira
PDBest: a user-friendly platform for manipulating and enhancing protein structures. Bioinform. 31(17): 2894-2896 (2015) - 2014
- [c10]Diego Barros, Raquel Oliveira Prates, Raquel Cardoso de Melo Minardi:
Uma investigação sobre as técnicas de visualização de informação quantitativas e qualitativas. IHC 2014: 397-400 - 2013
- [j4]Douglas E. V. Pires
aCSM: noise-free graph-based signatures to large-scale receptor-based ligand prediction. Bioinform. 29(7): 855-861 (2013) - [c9]Tiago Rodrigues, Prateek Dewan, Ponnurangam Kumaraguru, Raquel Cardoso de Melo Minardi, Virgílio A. F. Almeida:
uTrack: track yourself! monitoring information on online social media. WWW (Companion Volume) 2013: 273-276 - 2012
- [j3]Valdete M. Gonçalves-Almeida, Douglas E. V. Pires
HydroPaCe: understanding and predicting cross-inhibition in serine proteases through hydrophobic patch centroids. Bioinform. 28(3): 342-349 (2012) - [j2]Douglas E. V. Pires, Luam C. Totti, Rubens E. A. Moreira, Elverton C. Fazzion, Osvaldo L. H. M. Fonseca, Wagner Meira Jr., Raquel Cardoso de Melo Minardi, Dorgival Olavo Guedes Neto:
FPCluster: An Efficient Out-of-core Clustering Strategy without a Similarity Metric. J. Inf. Data Manag. 3(2): 132-141 (2012) - [c8]Sabrina de Azevedo Silveira, Artur O. Rodrigues, Raquel Cardoso de Melo Minardi
ADVISe: Visualizing the dynamics of enzyme annotations in UniProt/Swiss-Prot. BioVis 2012: 49-56 - [c7]Yussif Barcelos, Flavia Aburjaile, Laura R. Leite, Solange T. Oliveira, Raquel Cardoso de Melo Minardi:
Combining traditional and high-density visualizations in a dashboard to network health monitoring. IEEE VAST 2012: 295-296 - 2011
- [c6]Daniel Hasan Dalip, Raquel Lara dos Santos, Diogo Rennó Rocha de Oliveira, Valéria Freitas Amaral, Marcos André Gonçalves
GreenWiki: a tool to support users' assessment of the quality of Wikipedia articles. JCDL 2011: 469-470 - [c5]Douglas E. V. Pires, Luam C. Totti, Rubens E. A. Moreira, Elverton C. Fazzion, Osvaldo L. H. M. Fonseca, Wagner Meira Jr., Raquel Cardoso de Melo Minardi, Dorgival O. Guedes:
FPCluster: Uma estratégia eficiente de agrupamento out-of-core sem medida de similaridade. SBBD (Short Papers) 2011: 97-104 - [c4]Elisa Boari de Lima, Raquel Cardoso de Melo Minardi
Data Integration via Constrained Clustering: An Application to Enzyme Clustering. SDM 2011: 83-94 - 2010
- [j1]Raquel Cardoso de Melo Minardi
Identification of subfamily-specific sites based on active sites modeling and clustering. Bioinform. 26(24): 3075-3082 (2010)
2000 – 2009
- 2004
- [c3]Fernando A. Fernandes Jr., Rodrigo L. Carceroni, Carlos Eduardo R. Lopes, Wagner Meira Jr., Raquel C. de Melo, Arnaldo de Albuquerque Araújo, Marcelo M. Santoro, Carlos H. Silveira
An Image-Matching Approach to Protein Similarity Analysis. SIBGRAPI 2004: 17-24 - [c2]Wagner Moro Aioffi, Geraldo Robson Mateus, Jussara M. Almeida, Raquel C. de Melo:
Dynamic Content Placement for Mobile Content Distribution Networks. WCW 2004: 19-33 - 2003
- [c1]Tiago Adriano de Knegt López de Prado, Wagner Meira Jr., Marcelo M. Santoro, Márcio de Carvalho, Rodrigo L. Carceroni, Carlos H. Silveira, Raquel C. de Melo, Fabiano A. Fonseca:
Using Structural Signatures for Identifying Globins: the Intra-Subunit Electrostatic Interactions. WOB 2003: 157-160
Coauthor Index
aka: Carlos Henrique da Silveira
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last updated on 2024-10-23 21:24 CEST by the dblp team
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