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SoftwareX, Volume 26
Volume 26, 2024
- Mahir Habib, Muhammad Ashad Kabir, Lihong Zheng:
LEI2JSON: Schema-based validation and conversion of livestock event information. 101629 - Johannes Seiffarth, Tim Scherr, Bastian Wollenhaupt, Oliver Neumann, Hanno Scharr, Dietrich Kohlheyer, Ralf Mikut, Katharina Nöh:
ObiWan-Microbi: OMERO-based integrated workflow for annotating microbes in the cloud. 101638 - Yumeng Xu, Shubhanshu Tiwari, Marco Drago:
PycWB: A user-friendly, Modular, and python-based framework for gravitational wave unmodelled search. 101639 - Recep Durna, Alp Kagan Açan, Oguz Ziya Tikenogullari, Hüsnü Dal:
Hyper-Data: A Matlab based optimization software for data-driven hyperelasticity. 101642 - Przemyslaw Klesk:
FastRealBoostBins: An ensemble classifier for fast predictions implemented in Python via numba.jit and numba.cuda. 101644 - Veena K. M., Venkat Tummala, Yuva Sahith Varma Sangaraju, Marreddy Sai Vineel Reddy, Preetham Kumar, Veena Mayya, Uma Kulkarni, Sulatha V. Bhandary, Shailaja S.:
FFA-Lens: Lesion detection tool for chronic ocular diseases in Fluorescein angiography images. 101646 - Pietro Cinaglia:
GIN: A web-application for constructing synthetic datasets of interconnected networks in bioinformatics. 101647 - Antonio Molner, Francisco Carrillo-Perez, Alberto Guillén:
SnapperML: A python-based framework to improve machine learning operations. 101648 - Yan Liao, Jialin Hua, Liangqing Luo, Weiying Ping, Xuewen Lub, Yuansheng Zhong:
APRCOIE: An open information extraction system for Chinese. 101649 - Stella Erdmann, Rebecca A. Betensky:
KMstability: R tools to report the stability and precision of Kaplan-Meier estimates as well as measures of follow-up in time-to-event studies. 101650 - Sten Ternström:
Update 3.1 to FonaDyn - a system for real-time analysis of the electroglottogram, over the voice range. 101653 - Lei Zhang, Markus Stricker:
MatNexus: A comprehensive text mining and analysis suite for materials discovery. 101654 - Jun Zhao, Yu-Kwang Kim, Yu-Hyeong Jang, Jae Ho Chang, Sang Kyu Lee, Hyoung-Moon Kim:
MLEce: Statistical inference for asymptotically efficient closed-form estimators in R. 101655 - Min Young Lim, Seong Hee Park, Soo-Hyun Lee, Jung Won Yoon, Pyo Min Hong, Hwajung Yoo, Kon-Woo Kwon, Jongwook Jeong, Youn Kyu Lee:
VELCRO: A visual-based programming tool for effortless deep learning model construction. 101656 - Nathalia Silva-Cancino, Fernando Salazar, Ernest Bladé:
ACROPOLIS: A graphical user interface for classification of risk for off-stream reservoirs using machine learning. 101657 - Jakub Wieckowski, Wojciech Salabun:
MakeDecision: Online system for the graphical design of decision-making models in crisp and fuzzy environments. 101658 - Dong-Hyun Kim, Seokho Ahn, Euijong Lee, Young-Duk Seo:
Morpheme-based Korean text cohesion analyzer. 101659 - Laura Cozzi Ribeiro, Matheus Pereira Libório, Hasheem Mannan, Sandro Laudares, Petr Iakovlevitch Ekel, Douglas Alexandre Gomes Vieira, Cristiane Neri Nobre:
Software for building and measuring the quality of composite indicators using ordered weighted averaging: So-called S-CI-OWA. 101660 - Cedric Kiplimo, Collins Emasi Epege, Ciira Wa Maina, Billy Okal:
DSAIL-TreeVision: A software tool for extracting tree biophysical parameters from stereoscopic images. 101661 - Xiaohao Yang, Nathan Fox, Derek B. van Berkel, Mark Lindquist:
Viewscape: An R package for the spatial analysis of landscape perception and configurations in viewsheds of landscapes. 101662 - Pasquale De Rosa, Pascal Felber, Valerio Schiavoni:
CryptoAnalytics: Cryptocoins price forecasting with machine learning techniques. 101663 - Jesus-Angel Del-Hoyo-Gabaldon, Antonio Moreno-Cediel, Eva García-Lopez, Antonio García-Cabot, David de-Fitero-Dominguez:
Automatic dataset generation for automated program repair of bugs and vulnerabilities through SonarQube. 101664 - Juan Carlos de la Torre, José Miguel Aragón-Jurado, Abdón Crespo-Álvarez, Guillermo Bárcena-González:
GAGI: Game engine for Artificial General Intelligence experimentation. 101665 - Aurelio López-Fernández, Francisco Antonio Gómez Vela, Jorge González-Domínguez, Parameshachari Bidare Divakarachari:
bioScience: A new python science library for high-performance computing bioinformatics analytics. 101666 - Emilie Frost, Malin Radtke, Marvin Nebel-Wenner, Frauke Oest, Sanja Stark:
cosima-mango: Investigating Multi-Agent System robustness through integrated communication simulation. 101667 - Bruno Lourenço, Cátia Vaz, Miguel E. Coimbra, Alexandre P. Francisco:
phyloDB: A framework for large-scale phylogenetic analysis of sequence based typing data. 101668 - Blazej Szydelko, Dawid Mieloch, Adrian Dziembowski, Jakub Stankowski, Dominika Klóska, Jun Young Jeong, Gwangsoon Lee:
ECPC - versatile multicamera system calibration framework for immersive video applications. 101669 - Bashar Alshouha, Jesús Serrano-Guerrero, Francisco Chiclana, Francisco P. Romero, José Angel Olivas:
BioEmoDetector: A flexible platform for detecting emotions from health narratives. 101670 - Enzo Cording, Jagruti Thakur:
FleetRL: Realistic reinforcement learning environments for commercial vehicle fleets. 101671 - Zhe Bai, Abdelilah Essiari, Talita Perciano, Kristofer E. Bouchard:
AutoCT: Automated CT registration, segmentation, and quantification. 101673 - Quentin Petitjean, Silène Lartigue, Mélina Cointe, Nicolas Ris, Vincent Calcagno:
MoveR: An R package for easy processing and analysis of animal video-tracking data. 101674 - Ioannis Korontanis, Antonios Makris, Konstantinos Tserpes:
EdgeCloud Mon: A lightweight monitoring stack for K3s clusters. 101675 - Carlos Javier Fernández Candel, Paula Muñoz, Javier Troya, Antonio Vallecillo:
UTypes: A library for uncertain datatypes in Python. 101676 - Yonatha Almeida, Danyllo Albuquerque, Emanuel Dantas Filho, Felipe Muniz, Katyusco de F. Santos, Mirko Barbosa Perkusich, Hyggo O. Almeida, Angelo Perkusich:
AICodeReview: Advancing code quality with AI-enhanced reviews. 101677 - Pawel Terefenko, Jakub Sledziowski, Andrzej Giza, Kamran Tanwari, Witold Macków, Andrzej Lysko:
CCMORPH v2.0 - New coastal cliffs morphology analysis and visualization toolbox. 101678 - Adrian Kaim, Katarzyna Gwózdz:
myDLTS: LabVIEW based software for deep level transient spectroscopy using impedance analyser. 101679 - Mateusz Pawlowicz, Bartosz Balis, Adam Szymkiewicz, Jirka Simunek, Anna Gumula-Kawecka, Beata Jaworska-Szulc:
HMSE: A tool for coupling MODFLOW and HYDRUS-1D computer programs. 101680 - Piotr Beling:
BSuccinct: Rust libraries and programs focused on succinct data structures. 101681 - Courtney Allen, Alexandra Mazanko, Niloofar Abdehagh, Hermann J. Eberl:
ADM1jl: A Julia implementation of the Anaerobic Digestion Model 1. 101682 - James Pérez-Barrera, Arturo Gómez-Ortega, Mauricio Ivan Tenorio-Suárez, Katia Corrales-Camacho, Saul Piedra, Christian Félix-Martínez:
Version [2.0]- [MaSMaker: An open-source, portable software to create and integrate maze-like surfaces into arbitrary geometries]. 101683 - Paola Vallejo, Daniel Correa, Juan Carlos Arbeláez, Marta S. Tabares, Santiago Ruiz-Arenas, Elizabeth Rendón-Vélez, David Ríos-Zapata, Joan Alvarado:
EcoMind: Web-based waste labeling tool. 101684 - David Soler, Iván Cillero, Carlos Dafonte, Manuel Fernández-Veiga, Ana Fernández Vilas, Francisco Javier Nóvoa:
QKDNetSim+: Improvement of the quantum network simulator for NS-3. 101685 - Chunfang Li, Junli Lu, Yuchen Pei, Yushi Shen, Yuhang Hu, Yalv Fan, Yuanzhi Tian, Xiaoyu Linghu, Kun Wang, Zhuoqi Shi, Jiangnan Sun:
PyCinemetrics: Computational film studies tool based on deep learning and PySide2. 101686 - Barak Shoshany:
A C++17 thread pool for high-performance scientific computing. 101687 - Ahmed Chabib, Jean-François Witz, Pierre Gosselet, Vincent Magnier:
GCPU_OpticalFlow: A GPU accelerated Python software for strain measurement. 101688 - Chunfang Li, Yuchen Pei, Yushi Shen, Junli Lu, Yalv Fan, Xiaoyu Linghu, Yuanzhi Tian, Kun Wang:
PyVisVue3D3: Python visualization from hierarchy tree to call graph. 101689 - Guillaume L. Giudicelli, Alexander D. Lindsay, Logan H. Harbour, Casey Icenhour, Mengnan Li, Joshua Hansel, Peter German, Patrick Behne, Oana Marin, Roy H. Stogner, Jason M. Miller, Daniel Schwen, Yaqi Wang, Lynn Munday, Sebastian Schunert, Benjamin W. Spencer, Dewen Yushu, Antonio M. Recuero, Zachary M. Prince, Max Nezdyur, Tianchen Hu, Yinbin Miao, Yeon Sang Jung, Christopher Matthews, April Novak, Brandon Langley, Timothy J. Truster, Nuno Nobre, Brian Alger, David Andrs, Fande Kong, Robert W. Carlsen, Andrew E. Slaughter, John W. Peterson, Derek Gaston, Cody J. Permann:
3.0 - MOOSE: Enabling massively parallel multiphysics simulations. 101690 - Alexander Michels, Anand Padmanabhan, Zimo Xiao, Mit Kotak, Furqan Baig, Shaowen Wang:
CyberGIS-Compute: Middleware for democratizing scalable geocomputation. 101691 - Carlos Javier Fernández Candel, Paula Muñoz, Javier Troya, Antonio Vallecillo:
Corrigendum to "UTypes: A library for uncertain datatypes in Python" [SoftwareX, VOLUME 26, 101676, MAY 2024]. 101692 - Guus Rongen, Oswaldo Morales-Nápoles:
Matlatzinca: A PyBANSHEE-based graphical user interface for elicitation of non-parametric Bayesian networks from experts. 101693 - Fridtjof Betz, Felix Binkowski, Lilli Kuen, Sven Burger:
Version 2 - RPExpand: Software for Riesz projection expansion of resonance phenomena. 101694 - Weijie Ren, Wenjia Xie, Ye Zhang, Hang Yu, Zhengyu Tian:
Version [1.1] - [MSAT: Matrix stability analysis tool for shock-capturing schemes]. 101695 - Fernando M. Quintana, Juan Carlos de la Torre, Guillermo Bárcena-Gonzalez, Maria De La Paz Guerrero-Lebrero, Elisa Guerrero:
Release 2.0 - NEMSIM-RT: A real-time distributed spiking neural network simulator. 101696 - Zhiyu Pan, Syed Junayed Ahmed Anta, Antonello Monti:
Version [2.0.0]-[ENTIRETY - sEmanNTIc pRovisioning and govErning ioT devices in smart energY domain]. 101697 - Tomasz Górski:
SmarTS: A Java package for smart contract test suite generation and execution. 101698 - Damian Fraszczak, Edyta Fraszczak:
NetCenLib: A comprehensive python library for network centrality analysis and evaluation. 101699 - Christian Willberg, Jan-Timo Hesse, Anna Pernatii:
PeriLab - Peridynamic Laboratory. 101700 - Morgane Térézol, Anaïs Baudot, Ozan Ozisik:
ODAMNet: A Python package to identify molecular relationships between chemicals and rare diseases using overlap, active module and random walk approaches. 101701 - Sergio Paniego, Roberto Calvo-Palomino, José María Cañas:
Behavior metrics: An open-source assessment tool for autonomous driving tasks. 101702 - Maurilio Genovese, Agostino Arcasensa, Silvia Morbelli, Matteo Lenge, Carmen Barba, Laura Mirandola, Maria Eugenia Caligiuri, Massimo Caulo, Ferruccio Panzica, Francesco Cardinale, Camilla Rossi-Espagnet, Domenico Tortora, Anna E. Vaudano:
SWANe: Standardized workflow for advanced neuroimaging in epilepsy. 101703 - Hiba Hnaini, Raúl Mazo, Joël Champeau, Paola Vallejo, José A. Galindo:
E-SCORE: A web-based tool for security requirements engineering. 101704 - Ferdinand Lange, Tessa Habich, Sascha Beutel:
Think inside the (mk)box - A tool for creating and deploying application-specific Linux images utilized in a SiLA software development process. 101705 - Maksymilian Wojnar, Szymon Szott, Krzysztof Rusek, Wojciech Ciezobka:
Reinforced-lib: Rapid prototyping of reinforcement learning solutions. 101706 - Jakub Walczak, Marco Mancini, Shahbaz Alvi:
Kit4DL: Towards fast prototyping and experimentation in machine learning and deep learning. 101707 - Ibrahim Anwar Ibrahim, Tanveer Choudhury, James Sargeant, Rakibuzzaman Shah, Md. Jahangir Hossain, Syed Mofizul Islam:
CEREI: An open-source tool for Cost-Effective Renewable Energy Investments. 101708 - Julián Arenas-Guerrero, Paola Espinoza-Arias, José Antonio Bernabé-Díaz, Prashant Deshmukh, José Luis Sánchez-Fernández, Óscar Corcho:
An RML-FNML module for Python user-defined functions in Morph-KGC. 101709 - Onur Ates, Shailesh Appukuttan, Hélissande Fragnaud, Corentin Fragnaud, Andrew P. Davison:
NeoViewer: Facilitating reuse of electrophysiology data through browser-based interactive visualization. 101710 - Carl J. Legleiter, Michael Dille:
A Robot Operating System (ROS) package for mapping flow fields in rivers via Particle Image Velocimetry (PIV). 101711 - Patrícia J. Bota, Rafael Silva, Carlos Carreiras, Ana Fred, Hugo Plácido da Silva:
BioSPPy: A Python toolbox for physiological signal processing. 101712 - Jean De La Croix Ntivuguruzwa, Tohari Ahmad:
FuzConvSteganalysis: Steganalysis via fuzzy logic and convolutional neural network. 101713 - Paulius Tervydis, Linas Svilainis, Zilvinas Nakutis, Alberto Rodriguez-Martinez:
CloudEdgeAssetOptimizer: Tool to optimize the Cloud-Edge computing network resources at given requirements of processing delay, battery capacity and cost. 101714 - Michal Mrena, Miroslav Kvassay, Elena Zaitseva:
TeDDy: Templated decision diagram library. 101715 - Thuat T. Trinh, Morten Hammer, Vishist Sharma, Øivind Wilhelmsen:
Mie-FH: A quantum corrected pair potential in the LAMMPS simulation package for hydrogen mixtures. 101716 - Tomasz Berezowski, Szymon Niemiec, Andrzej Chybicki:
Floodsar: Automatic mapping of river flooding extent from multitemporal SAR imagery. 101717 - Matthias Rettl, Siegfried Martin Frankl, Martin Pletz, Markus Tauscher, Clara Schuecker:
ConForce: Computation of configurational forces for FEM results. 101718 - Jinseok Kim, Jenna Kim:
ANDez: An open-source tool for author name disambiguation using machine learning. 101719 - Hongqiang Xiong, Zhiyu Zhang, Jing Li:
GPRlab: A ground penetrating radar data processing and analysis software based on MATLAB. 101720 - Ewa Roszkowska, Bartlomiej Jefmanski, Andrzej Dudek, Marta Kusterka-Jefmanska:
IFMCDM: An R package for intuitionistic fuzzy multi-criteria decision making methods. 101721 - Stephan Thaler, Paul Fuchs, Ana Cukarska, Julija Zavadlav:
JaxSGMC: Modular stochastic gradient MCMC in JAX. 101722 - Ryan Godwin, Ryan L. Melvin:
Toward efficient data science: A comprehensive MLOps template for collaborative code development and automation. 101723 - Kelly R. Thorp, Kendall C. DeJonge, Tyler Pokoski, Dinesh Gulati, Meetpal Kukal, Fared Farag, Ahmed Hashem, Gabrial Erismann, Tamara Baumgartner, Annelie Holzkämper:
"Version 1.3.0 pyfao56: FAO-56 evapotranspiration in Python". 101724 - Daniel Cantero:
VBI-2D - Road vehicle-bridge interaction simulation tool and verification framework for Matlab. 101725 - Vu Tuan Hai, Nguyen Tan Viet, Le Bin Ho:
〈qo|op〉: A quantum object optimizer. 101726 - Raúl Marticorena Sánchez, Carlos López Nozal, Ana Serrano Mamolar, Alicia Olivares-Gil:
UBUMonitor: Desktop application for visual e-learning student clustering with Moodle. 101727 - Alberto Castaño, Jaime Alonso, Pablo González, Pablo Pérez, Juan José del Coz:
QuantificationLib: A Python library for quantification and prevalence estimation. 101728 - Pierfrancesco Bellini, Marco Fanfani, Paolo Nesi, Gianni Pantaleo:
Snap4City dashboard manager: A tool for creating and distributing complex and interactive dashboards with no or low coding. 101729 - Krzysztof Dyczkowski, Piotr Grochowalski, Dawid Kosior, Dorota Gil, Wojciech Koziol, Barbara Pekala, Uzay Kaymak, Caro Fuchs, Marco S. Nobile:
Python library for interval-valued fuzzy inference. 101730 - Leonard W. Hackel, Kai Norman Clasen, Begüm Demir:
ConfigILM: A general purpose configurable library for combining image and language models for visual question answering. 101731 - Cristóbal Heredia, Sebastián Moreno, Wilfredo F. Yushimito:
ODMeans: An R package for global and local cluster detection for Origin-Destination GPS data. 101732 - Jaime Céspedes Sisniega, Álvaro López García:
Frouros: An open-source Python library for drift detection in machine learning systems. 101733 - Pedro Gamallo-Fernandez, Efrén Rama-Maneiro, Juan Carlos Vidal, Manuel Lama:
VERONA: A python library for benchmarking deep learning in business process monitoring. 101734 - Nicolas Escribano, José Manuel Bielsa, Francisco Lahuerta:
pymetamodels: A Python package for metamodeling and design automation. 101735 - Rik D. T. Janssen:
Ricgraph: A flexible and extensible graph to explore research in context from various systems. 101736 - Haifa Gaza, Jaewook Byun:
Chronoweb: An open-source platform for analyzing temporal information diffusion on the web. 101738 - Axel Reyes, Marcelo Mendoza, Camila Vera, Francesca Lucchini, Jan Dimter, Felipe Gutiérrez, Naim Bro, Hans Lobel, Ariel Reyes:
SpatialCluster: A Python library for urban clustering. 101739 - Martí Manzano, Claudia P. Ayala, Cristina Gómez:
TrustML: A Python package for computing the trustworthiness of ML models. 101740 - Ayoub Belattmania, Mounir Hakkou, Taoufiq Chtioui, Abdelhaq Aangri, Assia Abdenour, El mehdi Latni, Abdessalam Benharra, Abdelkrim el Arrim, Azdine Dahaoui, Ahmed Raissouni, Lamiae Khali Issa, Lhoussaine Ed-daoudy:
Classwms: A MATLAB GUI for water masses classification using clustering analysis and K Nearest Neighbors. 101741 - Abbas SheikhMohammadZadeh, Nicolas Saunier, E. O. D. Waygood:
STUDIO: A Python graphical tool for analyzing street user observations from video data. 101742 - Todd J. Freeborn, Jacob A. Mota:
Ultrasound DICOM Renamer: A MATLAB graphical user interface for workflow improvement for DICOM ultrasound renaming. 101743 - Jakub Mitura, Beata E. Chrapko, Oliwia Bachanek-Mitura:
MedVoxelHD: Improved CUDA-accelerated morphological Hausdorff distances in medical image analysis. 101744 - My Driss Laanaoui, Mustapha Aatila, Mohamed Lachgar, Hamid Hrimech, Okacha Najia, Assouma Roukéya, Abou Elkhir Mohamed:
Version [1.1.0]- [DLDiagnosis: A mobile and web application for diseases classification using Deep Learning]. 101745 - Miguel Amaral, Gabriel Signoretti, Marianne Batista Diniz Da Silva, Ivanovitch Silva:
TAC: A Python package for IoT-focused Tiny Anomaly Compression. 101747 - Anna Labijak-Kowalska, Milosz Kadzinski:
robustDEA: A Java library for robust efficiency analysis. 101749 - Janusz Bedkowski:
End to end navigation stack for nuclear power plant inspection with mobile robot. 101750 - Han Meng, Gang Mei, John C. Tipper:
RealModel: A system for modeling and visualizing sedimentary rocks. 101751 - David Martínez Galicia, Alejandro Guerra-Hernández, Francisco Grimaldo, Nicandro Cruz-Ramírez, Xavier Limón:
ClassNoise: An R package for modeling, generating, and validating data with class noise. 101752 - Hyeonglae Cho, Hee-Seok Oh, Donghoh Kim:
GSD: An R package for graph signal decomposition. 101753 - Zachary M. Prince, Lynn Munday, Dewen Yushu, Max Nezdyur, Murthy Guddati:
MOOSE Optimization Module: Physics-constrained optimization. 101754 - Rien Maertens, Maarten Van Neyghem, Maxiem Geldhof, Charlotte Van Petegem, Niko Strijbol, Peter Dawyndt, Bart Mesuere:
Discovering and exploring cases of educational source code plagiarism with Dolos. 101755 - Giovanni Acampora, Carlos Cano Gutierrez, Angela Chiatto, José Manuel Soto-Hidalgo, Autilia Vitiello:
EVOVAQ: EVOlutionary algorithms-based toolbox for VAriational Quantum circuits. 101756 - Wonse Jo, Go-Eum Cha, Daniel Foti, Byung-Cheol Min:
SMART-TeleLoad: A new graphic user interface to generate affective loads for teleoperation. 101757 - Marco Krummenacher, Moritz Gubler, Jonas A. Finkler, Hannes Huber, Martin Sommer-Jörgensen, Stefan Goedecker:
Corrigendum to performing highly efficient minima hopping structure predictions using the Atomic Simulation Environment (ASE) [SoftwareX 25 (2024) 101632]. 101645
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