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6. WABI 2006: Zurich, Switzerland
- Philipp Bucher, Bernard M. E. Moret:
Algorithms in Bioinformatics, 6th International Workshop, WABI 2006, Zurich, Switzerland, September 11-13, 2006, Proceedings. Lecture Notes in Computer Science 4175, Springer 2006, ISBN 3-540-39583-0 - Markus T. Friberg, Pedro Gonnet
, Yves Barral
Measures of Codon Bias in Yeast, the tRNA Pairing Index and Possible DNA Repair Mechanisms. 1-11 - Sebastian Böcker
Decomposing Metabolomic Isotope Patterns. 12-23 - Hongmei Zhu, Jiaxin Wang, Zehong Yang, Yixu Song:
A Method to Design Standard HMMs with Desired Length Distribution for Biological Sequence Analysis. 24-31 - Marta Luksza
Efficient Model-Based Clustering for LC-MS Data. 32-43 - Lukas Burger, Erik van Nimwegen
A Bayesian Algorithm for Reconstructing Two-Component Signaling Networks. 44-55 - Bethany Man-Yee Chan, Joseph Wun-Tat Chan, Francis Y. L. Chin, Stanley P. Y. Fung, Ming-Yang Kao:
Linear-Time Haplotype Inference on Pedigrees Without Recombinations. 56-67 - Yinglei Song, Chunmei Liu, Russell L. Malmberg, Liming Cai:
Phylogenetic Network Inferences Through Efficient Haplotyping. 68-79 - Leo van Iersel, Judith Keijsper, Steven Kelk, Leen Stougie:
Beaches of Islands of Tractability: Algorithms for Parsimony and Minimum Perfect Phylogeny Haplotyping Problems. 80-91 - Jens Gramm, Tzvika Hartman, Till Nierhoff, Roded Sharan, Till Tantau:
On the Complexity of SNP Block Partitioning Under the Perfect Phylogeny Model. 92-102 - Paul A. Jenkins, Rune B. Lyngsø, Jotun Hein:
How Many Transcripts Does It Take to Reconstruct the Splice Graph? 103-114 - Jieping Ye, Ivaylo Ilinkin, Ravi Janardan, Adam Isom:
Multiple Structure Alignment and Consensus Identification for Proteins. 115-125 - Aaron E. Darling, Todd J. Treangen, Louxin Zhang, Carla Kuiken, Xavier Messeguer, Nicole T. Perna:
Procrastination Leads to Efficient Filtration for Local Multiple Alignment. 126-137 - Minmei Hou, Piotr Berman, Louxin Zhang, Webb Miller:
Controlling Size When Aligning Multiple Genomic Sequences with Duplications. 138-149 - Daniel H. Huson, Mike A. Steel, Jim Whitfield:
Reducing Distortion in Phylogenetic Networks. 150-161 - Barbara R. Holland, Glenn Conner, Katharina T. Huber, Vincent Moulton:
Imputing Supertrees and Supernetworks from Quartets. 162 - Anne Bergeron, Julia Mixtacki, Jens Stoye
A Unifying View of Genome Rearrangements. 163-173 - István Miklós, Timothy Brooks Paige, Péter Ligeti:
Efficient Sampling of Transpositions and Inverted Transpositions for Bayesian MCMC. 174-185 - Augusto F. Vellozo, Carlos E. R. Alves, Alair Pereira do Lago:
Alignment with Non-overlapping Inversions in O(n3)-Time. 186-196 - Geir Kjetil Sandve, Magnar Nedland, Øyvind Bø Syrstad, Lars Andreas Eidsheim, Osman Abul
Accelerating Motif Discovery: Motif Matching on Parallel Hardware. 197-206 - Jeff M. Phillips, Johannes Rudolph, Pankaj K. Agarwal:
Segmenting Motifs in Protein-Protein Interface Surfaces. 207-218 - Eun-Jong Hong, Tomás Lozano-Pérez:
Protein Side-Chain Placement Through MAP Estimation and Problem-Size Reduction. 219-230 - Shuai Cheng Li
On the Complexity of the Crossing Contact Map Pattern Matching Problem. 231-241 - Dandan Song, Zhidong Deng:
A Fuzzy Dynamic Programming Approach to Predict RNA Secondary Structure. 242-251 - Kathleen Steinhöfel, Alexandros Skaliotis, Andreas Alexander Albrecht:
Landscape Analysis for Protein-Folding Simulation in the H-P Model. 252-261 - Jizhen Zhao, Russell L. Malmberg, Liming Cai:
Rapid ab initio RNA Folding Including Pseudoknots Via Graph Tree Decomposition. 262-273 - Oleg Rokhlenko, Tomer Shlomi, Roded Sharan, Eytan Ruppin, Ron Y. Pinter:
Flux-Based vs. Topology-Based Similarity of Metabolic Genes. 274-285 - Dumitru Brinza, Alexander Zelikovsky
Combinatorial Methods for Disease Association Search and Susceptibility Prediction. 286-297 - Sven Rahmann, Gunnar W. Klau
Integer Linear Programs for Discovering Approximate Gene Clusters. 298-309 - Lusheng Wang, Yu Lin
Approximation Algorithms for Bi-clustering Problems. 310-320 - Sérgio A. de Carvalho, Sven Rahmann:
Improving the Layout of Oligonucleotide Microarrays: Pivot Partitioning. 321-332 - Marco Terzer, Jörg Stelling:
Accelerating the Computation of Elementary Modes Using Pattern Trees. 333-343 - Nikola Stojanovic, Piotr Berman:
A Linear-Time Algorithm for Studying Genetic Variation. 344-354 - Christian Blum, Mateu Yábar Vallès:
New Constructive Heuristics for DNA Sequencing by Hybridization. 355-365 - Dekel Tsur:
Optimal Probing Patterns for Sequencing by Hybridization. 366-375 - Laxmi Parida:
Gapped Permutation Patterns for Comparative Genomics. 376-387 - Miklós Csürös, Ming-Te Cheng, Andreas Grimm, Amine Halawani, Perrine Landreau:
Segmentation with an Isochore Distribution. 388-399
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