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Anjany Sekuboyina
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2020 – today
- 2024
- [c27]Ibrahim Ethem Hamamci, Sezgin Er, Anjany Sekuboyina, Enis Simsar, Alperen Tezcan, Ayse Gulnihan Simsek, Sevval Nil Esirgun, Furkan Almas, Irem Dogan, Muhammed Furkan Dasdelen, Chinmay Prabhakar, Hadrien Reynaud, Sarthak Pati, Christian Bluethgen, Mehmet Kemal Özdemir, Bjoern H. Menze:
GenerateCT: Text-Conditional Generation of 3D Chest CT Volumes. ECCV (79) 2024: 126-143 - [i29]Corentin Royer, Bjoern H. Menze, Anjany Sekuboyina:
MultiMedEval: A Benchmark and a Toolkit for Evaluating Medical Vision-Language Models. CoRR abs/2402.09262 (2024) - [i28]Hendrik Kristian Möller, Robert Graf
, Joachim Schmitt, Benjamin Keinert, Matan Atad, Anjany Sekuboyina, Felix Streckenbach, Hanna Schön, Florian Kofler, Thomas Kröncke
SPINEPS - Automatic Whole Spine Segmentation of T2-weighted MR images using a Two-Phase Approach to Multi-class Semantic and Instance Segmentation. CoRR abs/2402.16368 (2024) - [i27]Ibrahim Ethem Hamamci, Sezgin Er, Furkan Almas, Ayse Gulnihan Simsek, Sevval Nil Esirgun, Irem Dogan, Muhammed Furkan Dasdelen, Bastian Wittmann, Enis Simsar, Mehmet Simsar, Emine Bensu Erdemir, Abdullah Alanbay, Anjany Sekuboyina, Berkan Lafci, Mehmet Kemal Özdemir, Bjoern H. Menze:
A foundation model utilizing chest CT volumes and radiology reports for supervised-level zero-shot detection of abnormalities. CoRR abs/2403.17834 (2024) - [i26]Poulami Sinhamahapatra, Suprosanna Shit, Anjany Sekuboyina, Malek El Husseini, David Schinz, Nicolas Lenhart, Bjoern H. Menze, Jan Kirschke, Karsten Roscher, Stephan Günnemann:
Enhancing Interpretability of Vertebrae Fracture Grading using Human-interpretable Prototypes. CoRR abs/2404.02830 (2024) - [i25]Haozhe Luo, Ziyu Zhou, Corentin Royer, Anjany Sekuboyina, Bjoern H. Menze:
DeViDe: Faceted medical knowledge for improved medical vision-language pre-training. CoRR abs/2404.03618 (2024) - 2023
- [j4]Patrick Bilic, Patrick Ferdinand Christ, Hongwei Li
The Liver Tumor Segmentation Benchmark (LiTS). Medical Image Anal. 84: 102680 (2023) - [c26]Anjany Sekuboyina, Jannik Irmai, Suprosanna Shit
Pushing the Limits of an FCN and A CRF Towards Near-Ideal Vertebrae Labelling. ISBI 2023: 1-5 - [c25]Ibrahim Ethem Hamamci, Sezgin Er, Enis Simsar, Anjany Sekuboyina, Mustafa Gundogar, Bernd Stadlinger, Albert Mehl
Diffusion-Based Hierarchical Multi-label Object Detection to Analyze Panoramic Dental X-Rays. MICCAI (6) 2023: 389-399 - [i24]Ibrahim Ethem Hamamci, Sezgin Er, Enis Simsar, Anjany Sekuboyina, Mustafa Gundogar, Bernd Stadlinger, Albert Mehl, Bjoern H. Menze:
Diffusion-Based Hierarchical Multi-Label Object Detection to Analyze Panoramic Dental X-rays. CoRR abs/2303.06500 (2023) - [i23]Robert Graf
Denoising diffusion-based MR to CT image translation enables whole spine vertebral segmentation in 2D and 3D without manual annotations. CoRR abs/2308.09345 (2023) - [i22]Jianning Li, Antonio Pepe, Christina Gsaxner, Gijs Luijten, Yuan Jin, Narmada Ambigapathy, Enrico Nasca, Naida Solak, Gian Marco Melito
MedShapeNet - A Large-Scale Dataset of 3D Medical Shapes for Computer Vision. CoRR abs/2308.16139 (2023) - [i21]Kaiyuan Yang, Fabio Musio, Yihui Ma, Norman Juchler, Johannes C. Paetzold, Rami Al-Maskari, Luciano Höher, Hongwei Bran Li, Ibrahim Ethem Hamamci, Anjany Sekuboyina, Suprosanna Shit, Houjing Huang, Diana Waldmannstetter, Florian Kofler, Fernando Navarro, Martin J. Menten, Ivan Ezhov, Daniel Rueckert, Iris N. Vos, Ynte M. Ruigrok, Birgitta K. Velthuis, Hugo J. Kuijf, Julien Hämmerli, Catherine Wurster, Philippe Bijlenga, Laura Westphal, Jeroen Bisschop, Elisa Colombo, Hakim Baazaoui, Andrew Makmur, James Hallinan, Benedikt Wiestler, Jan S. Kirschke, Roland Wiest, Emmanuel Montagnon, Laurent Létourneau-Guillon, Adrian Galdran, Francesco Galati, Daniele Falcetta, Maria A. Zuluaga, Chaolong Lin, Haoran Zhao, Zehan Zhang, Sinyoung Ra, Jongyun Hwang, Hyunjin Park, Junqiang Chen, Marek Wodzinski, Henning Müller, et al.:
Benchmarking the CoW with the TopCoW Challenge: Topology-Aware Anatomical Segmentation of the Circle of Willis for CTA and MRA. CoRR abs/2312.17670 (2023) - 2022
- [j3]Carolin M. Pirkl
Learning residual motion correction for fast and robust 3D multiparametric MRI. Medical Image Anal. 77: 102387 (2022) - [c24]Fernando Navarro, Guido Sasahara, Suprosanna Shit, Anjany Sekuboyina, Ivan Ezhov, Jan C. Peeken, Stephanie E. Combs, Bjoern H. Menze
A Unified 3D Framework for Organs-at-Risk Localization and Segmentation for Radiation Therapy Planning. EMBC 2022: 1544-1547 - [c23]Fernando Navarro, Christopher Watanabe, Suprosanna Shit, Anjany Sekuboyina, Jan C. Peeken, Stephanie E. Combs, Bjoern H. Menze
Self-Supervised Pretext Tasks in Model Robustness & Generalizability: A Revisit from Medical Imaging Perspective. EMBC 2022: 5074-5079 - [c22]Chinmay Prabhakar, Anjany Sekuboyina, Hongwei Bran Li, Johannes C. Paetzold, Suprosanna Shit, Tamaz Amiranashvili, Jens Kleesiek, Bjoern H. Menze:
Structured Knowledge Graphs for Classifying Unseen Patterns in Radiographs. GeoMedIA 2022: 45-60 - 2021
- [j2]Anjany Sekuboyina, Malek El Husseini, Amirhossein Bayat, Maximilian Löffler, Hans Liebl, Hongwei Li
VerSe: A Vertebrae labelling and segmentation benchmark for multi-detector CT images. Medical Image Anal. 73: 102166 (2021) - [c21]Suprosanna Shit
clDice - A Novel Topology-Preserving Loss Function for Tubular Structure Segmentation. CVPR 2021: 16560-16569 - [c20]Hongwei Li
Micro-Ct Synthesis and Inner Ear Super Resolution via Generative Adversarial Networks and Bayesian Inference. ISBI 2021: 1500-1504 - [c19]Anjany Sekuboyina, Daniel Oñoro-Rubio, Jens Kleesiek, Brandon Malone:
A Relational-Learning Perspective To Multi-Label Chest X-Ray Classification. ISBI 2021: 1618-1622 - [c18]Hongwei Li, Sunita Gopal, Anjany Sekuboyina, Jianguo Zhang
Unpaired MR Image Homogenisation by Disentangled Representations and Its Uncertainty. UNSURE/PIPPI@MICCAI 2021: 44-53 - [c17]Christina Bukas, Bailiang Jian, Luis F. Rodriguez Venegas, Francesca De Benetti, Sebastian Ruehling, Anjany Sekuboyina, Jens Gempt, Jan S. Kirschke, Marie Piraud, Johannes Oberreuter, Nassir Navab, Thomas Wendler:
Patient-Specific Virtual Spine Straightening and Vertebra Inpainting: An Automatic Framework for Osteoplasty Planning. MICCAI (4) 2021: 529-539 - [c16]Carolin M. Pirkl, Matteo Cencini, Jan W. Kurzawski, Diana Waldmannstetter, Hongwei Li, Anjany Sekuboyina, Sebastian Endt, Luca Peretti, Graziella Donatelli, Rosa Pasquariello, Michela Tosetti, Mauro Costagli, Guido Buonincontri, Marion I. Menzel, Bjoern H. Menze:
Residual learning for 3D motion corrected quantitative MRI: Robust clinical T1, T2 and proton density mapping. MIDL 2021: 618-632 - [c15]Johannes C. Paetzold, Julian McGinnis, Suprosanna Shit, Ivan Ezhov, Paul Büschl, Chinmay Prabhakar, Anjany Sekuboyina, Mihail I. Todorov, Georgios Kaissis, Ali Ertürk, Stephan Günnemann, Bjoern H. Menze:
Whole Brain Vessel Graphs: A Dataset and Benchmark for Graph Learning and Neuroscience. NeurIPS Datasets and Benchmarks 2021 - [i20]Fabian Balsiger, Alain Jungo, Naren Akash R. J, Jianan Chen, Ivan Ezhov, Shengnan Liu, Jun Ma, Johannes C. Paetzold, Vishva Saravanan R, Anjany Sekuboyina, Suprosanna Shit, Yannick Suter, Moshood Yekini, Guodong Zeng, Markus Rempfler:
The MICCAI Hackathon on reproducibility, diversity, and selection of papers at the MICCAI conference. CoRR abs/2103.05437 (2021) - [i19]Anjany Sekuboyina, Daniel Oñoro-Rubio, Jens Kleesiek, Brandon Malone:
A Relational-learning Perspective to Multi-label Chest X-ray Classification. CoRR abs/2103.06220 (2021) - [i18]Hans Liebl, David Schinz, Anjany Sekuboyina, Luca Malagutti, Maximilian T. Löffler, Amirhossein Bayat, Malek El Husseini, Giles Tetteh, Katharina Grau, Eva Niederreiter, Thomas Baum, Benedikt Wiestler, Bjoern H. Menze, Rickmer Braren, Claus Zimmer, Jan S. Kirschke:
A Computed Tomography Vertebral Segmentation Dataset with Anatomical Variations and Multi-Vendor Scanner Data. CoRR abs/2103.06360 (2021) - [i17]Christina Bukas, Bailiang Jian, Luis F. Rodriguez Venegas, Francesca De Benetti, Sebastian Ruehling, Anjany Sekuboyina, Jens Gempt, Jan S. Kirschke, Marie Piraud, Johannes Oberreuter, Nassir Navab, Thomas Wendler:
Patient-specific virtual spine straightening and vertebra inpainting: An automatic framework for osteoplasty planning. CoRR abs/2103.07279 (2021) - [i16]Fernando Navarro, Christopher Watanabe, Suprosanna Shit, Anjany Sekuboyina, Jan C. Peeken, Stephanie E. Combs, Bjoern H. Menze:
Evaluating the Robustness of Self-Supervised Learning in Medical Imaging. CoRR abs/2105.06986 (2021) - [i15]Johannes C. Paetzold, Julian McGinnis, Suprosanna Shit, Ivan Ezhov, Paul Büschl, Chinmay Prabhakar, Mihail I. Todorov, Anjany Sekuboyina, Georgios Kaissis, Ali Ertürk, Stephan Günnemann, Bjoern H. Menze:
Whole Brain Vessel Graphs: A Dataset and Benchmark for Graph Learning and Neuroscience (VesselGraph). CoRR abs/2108.13233 (2021) - 2020
- [c14]Malek El Husseini, Anjany Sekuboyina, Maximilian Löffler, Fernando Navarro, Bjoern H. Menze
Grading Loss: A Fracture Grade-Based Metric Loss for Vertebral Fracture Detection. MICCAI (6) 2020: 733-742 - [c13]Amirhossein Bayat, Anjany Sekuboyina, Johannes C. Paetzold, Christian Payer, Darko Stern, Martin Urschler
Inferring the 3D Standing Spine Posture from 2D Radiographs. MICCAI (6) 2020: 775-784 - [c12]Fernando Navarro, Anjany Sekuboyina, Diana Waldmannstetter, Jan C. Peeken, Stephanie E. Combs, Bjoern H. Menze:
Deep Reinforcement Learning for Organ Localization in CT. MIDL 2020: 544-554 - [c11]Carolin M. Pirkl, Pedro A. Gómez, Ilona Lipp, Guido Buonincontri, Miguel Molina-Romero, Anjany Sekuboyina, Diana Waldmannstetter, Jonathan Dannenberg, Sebastian Endt, Alberto Merola, Joseph R. Whittaker, Valentina Tomassini, Michela Tosetti, Derek K. Jones, Bjoern H. Menze, Marion I. Menzel:
Deep learning-based parameter mapping for joint relaxation and diffusion tensor MR Fingerprinting. MIDL 2020: 638-654 - [c10]Ahmad Bin Qasim, Ivan Ezhov, Suprosanna Shit, Oliver Schoppe, Johannes C. Paetzold, Anjany Sekuboyina, Florian Kofler, Jana Lipková, Hongwei Li, Bjoern H. Menze:
Red-GAN: Attacking class imbalance via conditioned generation. Yet another medical imaging perspective. MIDL 2020: 655-668 - [c9]Diana Waldmannstetter, Fernando Navarro, Benedikt Wiestler
Reinforced Redetection of Landmark in Pre- and Post-operative Brain Scan Using Anatomical Guidance for Image Alignment. WBIR 2020: 81-90 - [i14]Anjany Sekuboyina, Malek El Husseini, Amirhossein Bayat, Maximilian Löffler, Hans Liebl, Hongwei Li, Giles Tetteh, Jan Kukacka, Christian Payer, Darko Stern, Martin Urschler, Maodong Chen, Dalong Cheng, Nikolas Lessmann, Yujin Hu, Tianfu Wang, Dong Yang, Daguang Xu, Felix Ambellan, Tamaz Amiranashvili, Moritz Ehlke, Hans Lamecker, Sebastian Lehnert, Marilia Lirio, Nicolás Pérez de Olaguer, Heiko Ramm, Manish Sahu, Alexander Tack, Stefan Zachow, Tao Jiang, Xinjun Ma, Christoph Angerman, Xin Wang, Kevin Brown, Alexandre Kirszenberg, Élodie Puybareau, Di Chen, Yiwei Bai, Brandon H. Rapazzo, Timyoas Yeah, Amber Zhang, Shangliang Xu, Feng Hou, Zhiqiang He, Chan Zeng, Xiangshang Zheng, Liming Xu, Tucker J. Netherton, Raymond P. Mumme, Laurence E. Court, Zixun Huang, Chenhang He, Li-Wen Wang, Sai Ho Ling, Lê Duy Huynh, Nicolas Boutry, Roman Jakubícek, Jirí Chmelík, Supriti Mulay, Mohanasankar Sivaprakasam, Johannes C. Paetzold, Suprosanna Shit, Ivan Ezhov, Benedikt Wiestler, Ben Glocker, Alexander Valentinitsch, Markus Rempfler, Björn H. Menze, Jan S. Kirschke:
VerSe: A Vertebrae Labelling and Segmentation Benchmark for Multi-detector CT Images. CoRR abs/2001.09193 (2020) - [i13]Suprosanna Shit, Johannes C. Paetzold, Anjany Sekuboyina, Andrey Zhylka, Ivan Ezhov, Alexander Unger, Josien P. W. Pluim, Giles Tetteh, Bjoern H. Menze:
clDice - a Topology-Preserving Loss Function for Tubular Structure Segmentation. CoRR abs/2003.07311 (2020) - [i12]Ahmad Bin Qasim, Ivan Ezhov, Suprosanna Shit, Oliver Schoppe, Johannes C. Paetzold, Anjany Sekuboyina, Florian Kofler, Jana Lipková, Hongwei Li, Bjoern H. Menze:
Red-GAN: Attacking class imbalance via conditioned generation. Yet another medical imaging perspective. CoRR abs/2004.10734 (2020) - [i11]Fernando Navarro, Anjany Sekuboyina, Diana Waldmannstetter, Jan C. Peeken, Stephanie E. Combs, Bjoern H. Menze:
Deep Reinforcement Learning for Organ Localization in CT. CoRR abs/2005.04974 (2020) - [i10]Amirhossein Bayat, Anjany Sekuboyina, Johannes C. Paetzold, Christian Payer, Darko Stern, Martin Urschler, Jan S. Kirschke, Bjoern H. Menze:
Inferring the 3D Standing Spine Posture from 2D Radiographs. CoRR abs/2007.06612 (2020) - [i9]Malek El Husseini, Anjany Sekuboyina, Maximilian Löffler, Fernando Navarro, Bjoern H. Menze, Jan S. Kirschke:
Grading Loss: A Fracture Grade-based Metric Loss for Vertebral Fracture Detection. CoRR abs/2008.07831 (2020) - [i8]Hongwei Li, Rameshwara G. N. Prasad, Anjany Sekuboyina, Chen Niu, Siwei Bai, Werner Hemmert, Björn H. Menze:
Micro-CT Synthesis and Inner Ear Super Resolution via Bayesian Generative Adversarial Networks. CoRR abs/2010.14105 (2020)
2010 – 2019
- 2019
- [j1]Yu Zhao
Knowledge-Aided Convolutional Neural Network for Small Organ Segmentation. IEEE J. Biomed. Health Informatics 23(4): 1363-1373 (2019) - [c8]Yu Zhao, Yuan Liu, Yansheng Kan, Anjany Sekuboyina, Diana Waldmannstetter, Hongwei Li
Spatial-Frequency Non-local Convolutional LSTM Network for pRCC Classification. MICCAI (6) 2019: 22-30 - [c7]Malek El Husseini, Anjany Sekuboyina, Amirhossein Bayat, Bjoern H. Menze
Conditioned Variational Auto-encoder for Detecting Osteoporotic Vertebral Fractures. CSI@MICCAI 2019: 29-38 - [c6]Amirhossein Bayat, Anjany Sekuboyina, Felix Hofmann, Malek El Husseini, Jan S. Kirschke, Bjoern H. Menze
Vertebral Labelling in Radiographs: Learning a Coordinate Corrector to Enforce Spinal Shape. CSI@MICCAI 2019: 39-46 - [c5]Anjany Sekuboyina, Markus Rempfler, Alexander Valentinitsch, Maximilian Löffler, Jan S. Kirschke, Bjoern H. Menze
Probabilistic Point Cloud Reconstructions for Vertebral Shape Analysis. MICCAI (6) 2019: 375-383 - [c4]Hongwei Li
DiamondGAN: Unified Multi-modal Generative Adversarial Networks for MRI Sequences Synthesis. MICCAI (4) 2019: 795-803 - [i7]Patrick Bilic, Patrick Ferdinand Christ, Eugene Vorontsov, Grzegorz Chlebus, Hao Chen, Qi Dou, Chi-Wing Fu, Xiao Han, Pheng-Ann Heng, Jürgen Hesser, Samuel Kadoury, Tomasz K. Konopczynski, Miao Le, Chunming Li, Xiaomeng Li, Jana Lipková, John S. Lowengrub, Hans Meine, Jan Hendrik Moltz, Chris Pal, Marie Piraud, Xiaojuan Qi, Jin Qi, Markus Rempfler, Karsten Roth, Andrea Schenk
The Liver Tumor Segmentation Benchmark (LiTS). CoRR abs/1901.04056 (2019) - [i6]Anjany Sekuboyina, Markus Rempfler, Alexander Valentinitsch, Jan S. Kirschke, Bjoern H. Menze:
Adversarially Learning a Local Anatomical Prior: Vertebrae Labelling with 2D reformations. CoRR abs/1902.02205 (2019) - [i5]Hongwei Li, Johannes C. Paetzold, Anjany Sekuboyina, Florian Kofler, Jianguo Zhang, Jan S. Kirschke, Benedikt Wiestler, Bjoern H. Menze:
DiamondGAN: Unified Multi-Modal Generative Adversarial Networks for MRI Sequences Synthesis. CoRR abs/1904.12894 (2019) - [i4]Anjany Sekuboyina, Markus Rempfler, Alexander Valentinitsch, Maximilian Löffler, Jan S. Kirschke, Bjoern H. Menze:
Probabilistic Point Cloud Reconstructions for Vertebral Shape Analysis. CoRR abs/1907.09254 (2019) - 2018
- [c3]Marie Piraud
Multi-level Activation for Segmentation of Hierarchically-Nested Classes. ECCV Workshops (6) 2018: 345-353 - [c2]Anjany Sekuboyina, Markus Rempfler, Jan Kukacka
Btrfly Net: Vertebrae Labelling with Energy-Based Adversarial Learning of Local Spine Prior. MICCAI (4) 2018: 649-657 - [i3]Anjany Sekuboyina, Markus Rempfler, Jan Kukacka, Giles Tetteh, Alexander Valentinitsch, Jan S. Kirschke, Bjoern H. Menze:
Btrfly Net: Vertebrae Labelling with Energy-based Adversarial Learning of Local Spine Prior. CoRR abs/1804.01307 (2018) - [i2]Marie Piraud, Anjany Sekuboyina, Bjoern H. Menze:
Multi-level Activation for Segmentation of Hierarchically-nested Classes. CoRR abs/1804.01910 (2018) - 2017
- [c1]Anjany Sekuboyina, Jan Kukacka
Attention-Driven Deep Learning for Pathological Spine Segmentation. MSKI@MICCAI 2017: 108-119 - [i1]Anjany Sekuboyina, Alexander Valentinitsch, Jan S. Kirschke, Bjoern H. Menze:
A Localisation-Segmentation Approach for Multi-label Annotation of Lumbar Vertebrae using Deep Nets. CoRR abs/1703.04347 (2017)
Coauthor Index
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last updated on 2024-11-11 21:29 CET by the dblp team
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