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Sylvain V. Costes
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2020 – today
- 2024
- [c3]Bishwaranjan Bhattacharjee, Aashka Trivedi, Masayasu Muraoka, Muthukumaran Ramasubramanian, Takuma Udagawa, Iksha Gurung, Nishan Pantha, Rong Zhang, Bharath Dandala, Rahul Ramachandran, Manil Maskey, Kaylin M. Bugbee, Michael Little, Elizabeth Fancher, Irina Gerasimov, Armin Mehrabian, Lauren M. Sanders, Sylvain Costes, Sergi Blanco-Cuaresma, Kelly E. Lockhart, Thomas Allen, Félix Grèzes, Megan Ansdell, Alberto Accomazzi, Yousef El-Kurdi, Davis Wertheimer, Birgit Pfitzmann, Cesar Berrospi Ramis, Michele Dolfi, Rafael Teixeira de Lima, Panagiotis Vagenas, S. Karthik Mukkavilli, Peter W. J. Staar, Sanaz Vahidinia, Ryan McGranaghan, Tsengdar J. Lee:
INDUS: Effective and Efficient Language Models for Scientific Applications. EMNLP (Industry Track) 2024: 98-112 - [i3]Bishwaranjan Bhattacharjee, Aashka Trivedi, Masayasu Muraoka, Muthukumaran Ramasubramanian, Takuma Udagawa, Iksha Gurung, Rong Zhang, Bharath Dandala, Rahul Ramachandran, Manil Maskey, Kaylin M. Bugbee, Mike Little, Elizabeth Fancher, Lauren M. Sanders, Sylvain V. Costes, Sergi Blanco-Cuaresma, Kelly E. Lockhart, Thomas Allen, Félix Grèzes, Megan Ansdell, Alberto Accomazzi, Yousef El-Kurdi, Davis Wertheimer, Birgit Pfitzmann, Cesar Berrospi Ramis, Michele Dolfi, Rafael Teixeira de Lima, Panagiotis Vagenas, S. Karthik Mukkavilli, Peter W. J. Staar, Sanaz Vahidinia, Ryan McGranaghan, Armin Mehrabian, Tsengdar J. Lee:
INDUS: Effective and Efficient Language Models for Scientific Applications. CoRR abs/2405.10725 (2024) - 2023
- [j8]John H. Morris, Karthik Soman, Rabia E. Akbas, Xiaoyuan Zhou, Brett Smith, Elaine C. Meng, Conrad C. Huang, Gabriel Cerono, Gundolf Schenk, Angela Rizk-Jackson, Adil Harroud, Lauren M. Sanders, Sylvain V. Costes, Krish Bharat, Arjun Chakraborty, Alexander R. Pico, Taline Mardirossian, Michael J. Keiser, Alice Tang, Josef Hardi, Yongmei Shi, Mark A. Musen, Sharat Israni, Sui Huang, Peter W. Rose, Charlotte A. Nelson, Sergio E. Baranzini:
The scalable precision medicine open knowledge engine (SPOKE): a massive knowledge graph of biomedical information. Bioinform. 39(2) (2023) - [j7]Ryan T. Scott, Lauren M. Sanders, Erik L. Antonsen, Jaden J. A. Hastings, Seung-Min Park, Graham Mackintosh, Robert J. Reynolds, Adrienne L. Hoarfrost, Aenor Sawyer, Casey S. Greene, Benjamin S. Glicksberg, Corey A. Theriot, Daniel C. Berrios, Jack Miller, Joel Babdor, Richard Barker, Sergio E. Baranzini, Afshin Beheshti, Stuart J. Chalk, Guillermo M. Delgado-Aparicio, Melissa A. Haendel, Arif A. Hamid, Philip Heller, Daniel Jamieson, Katelyn J. Jarvis, John Kalantari, Kia Khezeli, Svetlana V. Komarova, Matthieu Komorowski, Prachi Kothiyal, Ashish Mahabal, Uri Manor, Héctor García Martín, Christopher E. Mason, Mona Matar, George I. Mias, Jerry G. Myers Jr., Charlotte A. Nelson, Jonathan Oribello, Patricia Parsons-Wingerter, R. K. Prabhu, Amina Ann Qutub, Jon Rask, Amanda Saravia-Butler, Suchi Saria, Nitin Kumar Singh, Michael Snyder, Frank Soboczenski, Karthik Soman, David Van Valen, Kasthuri Venkateswaran, Liz Warren, Liz Worthey, Jason H. Yang, Marinka Zitnik, Sylvain V. Costes:
Biomonitoring and precision health in deep space supported by artificial intelligence. Nat. Mac. Intell. 5(3): 196-207 (2023) - [j6]Lauren M. Sanders, Ryan T. Scott, Jason H. Yang, Amina Ann Qutub, Héctor García Martín, Daniel C. Berrios, Jaden J. A. Hastings, Jon Rask, Graham Mackintosh, Adrienne L. Hoarfrost, Stuart J. Chalk, John Kalantari, Kia Khezeli, Erik L. Antonsen, Joel Babdor, Richard Barker, Sergio E. Baranzini, Afshin Beheshti, Guillermo M. Delgado-Aparicio, Benjamin S. Glicksberg, Casey S. Greene, Melissa A. Haendel, Arif A. Hamid, Philip Heller, Daniel Jamieson, Katelyn J. Jarvis, Svetlana V. Komarova, Matthieu Komorowski, Prachi Kothiyal, Ashish Mahabal, Uri Manor, Christopher E. Mason, Mona Matar, George I. Mias, Jack Miller, Jerry G. Myers Jr., Charlotte A. Nelson, Jonathan Oribello, Seung-Min Park, Patricia Parsons-Wingerter, R. K. Prabhu, Robert J. Reynolds, Amanda Saravia-Butler, Suchi Saria, Aenor Sawyer, Nitin Kumar Singh, Michael Snyder, Frank Soboczenski, Karthik Soman, Corey A. Theriot, David Van Valen, Kasthuri Venkateswaran, Liz Warren, Liz Worthey, Marinka Zitnik, Sylvain V. Costes:
Biological research and self-driving labs in deep space supported by artificial intelligence. Nat. Mac. Intell. 5(3): 208-219 (2023) - 2021
- [j5]Daniel C. Berrios, Jonathan M. Galazka, Kirill Grigorev, Samrawit Gebre, Sylvain V. Costes:
NASA GeneLab: interfaces for the exploration of space omics data. Nucleic Acids Res. 49(Database-Issue): D1515-D1522 (2021) - [j4]Hung Nguyen, Duc Tran, Jonathan M. Galazka, Sylvain V. Costes, Afshin Beheshti, Juli Petereit, Sorin Draghici, Tin Nguyen:
CPA: a web-based platform for consensus pathway analysis and interactive visualization. Nucleic Acids Res. 49(Webserver-Issue): 114-124 (2021) - [i2]Ryan T. Scott, Erik L. Antonsen, Lauren M. Sanders, Jaden J. A. Hastings, Seung-Min Park, Graham Mackintosh, Robert J. Reynolds, Adrienne L. Hoarfrost, Aenor Sawyer, Casey S. Greene, Benjamin S. Glicksberg, Corey A. Theriot, Daniel C. Berrios, Jack Miller, Joel Babdor, Richard Barker, Sergio E. Baranzini, Afshin Beheshti, Stuart J. Chalk, Guillermo M. Delgado-Aparicio, Melissa A. Haendel, Arif A. Hamid, Philip Heller, Daniel Jamieson, Katelyn J. Jarvis, John Kalantari, Kia Khezeli, Svetlana V. Komarova, Matthieu Komorowski, Prachi Kothiyal, Ashish Mahabal, Uri Manor, Héctor García Martín, Christopher E. Mason, Mona Matar, George I. Mias, Jerry G. Myers Jr., Charlotte A. Nelson, Jonathan Oribello, Patricia Parsons-Wingerter, R. K. Prabhu, Amina Ann Qutub, Jon Rask, Amanda Saravia-Butler, Suchi Saria, Nitin Kumar Singh, Frank Soboczenski, Michael Snyder, Karthik Soman, David Van Valen, Kasthuri Venkateswaran, Liz Warren, Liz Worthey, Jason H. Yang, Marinka Zitnik, Sylvain V. Costes:
Beyond Low Earth Orbit: Biomonitoring, Artificial Intelligence, and Precision Space Health. CoRR abs/2112.12554 (2021) - [i1]Lauren M. Sanders, Jason H. Yang, Ryan T. Scott, Amina Ann Qutub, Héctor García Martín, Daniel C. Berrios, Jaden J. A. Hastings, Jon Rask, Graham Mackintosh, Adrienne L. Hoarfrost, Stuart J. Chalk, John Kalantari, Kia Khezeli, Erik L. Antonsen, Joel Babdor, Richard Barker, Sergio E. Baranzini, Afshin Beheshti, Guillermo M. Delgado-Aparicio, Benjamin S. Glicksberg, Casey S. Greene, Melissa A. Haendel, Arif A. Hamid, Philip Heller, Daniel Jamieson, Katelyn J. Jarvis, Svetlana V. Komarova, Matthieu Komorowski, Prachi Kothiyal, Ashish Mahabal, Uri Manor, Christopher E. Mason, Mona Matar, George I. Mias, Jack Miller, Jerry G. Myers Jr., Charlotte A. Nelson, Jonathan Oribello, Seung-Min Park, Patricia Parsons-Wingerter, R. K. Prabhu, Robert J. Reynolds, Amanda Saravia-Butler, Suchi Saria, Aenor Sawyer, Nitin Kumar Singh, Frank Soboczenski, Michael Snyder, Karthik Soman, Corey A. Theriot, David Van Valen, Kasthuri Venkateswaran, Liz Warren, Liz Worthey, Marinka Zitnik, Sylvain V. Costes:
Beyond Low Earth Orbit: Biological Research, Artificial Intelligence, and Self-Driving Labs. CoRR abs/2112.12582 (2021) - 2020
- [j3]Lindsay Rutter, Richard Barker, Daniela Bezdan, Henry Cope, Sylvain V. Costes, Lovorka Degoricija, Kathleen M. Fisch, Mariano I. Gabitto, Samrawit Gebre, Stefania Giacomello, Simon Gilroy, Stefan J. Green, Christopher E. Mason, Sigrid S. Reinsch, Nathaniel J. Szewczyk, Deanne M. Taylor, Jonathan M. Galazka, Raúl Herranz, Masafumi Muratani:
A New Era for Space Life Science: International Standards for Space Omics Processing. Patterns 1(9): 100148 (2020)
2010 – 2019
- 2019
- [j2]Shayoni Ray, Samrawit Gebre, Homer Fogle, Daniel C. Berrios, Peter B. Tran, Jonathan M. Galazka, Sylvain V. Costes:
GeneLab: Omics database for spaceflight experiments. Bioinform. 35(10): 1753-1759 (2019) - 2018
- [c2]Daniel C. Berrios, Afshin Beheshti, Sylvain Costes:
FAIRness and Usability for Open-access Omics Data Systems. AMIA 2018 - [c1]Daniel C. Berrios, Sylvain Costes, Peter B. Tran:
NASA's GeneLab: An Integrated Omics Data Commons and Workbench. AMIA 2018
2000 – 2009
- 2007
- [j1]Sylvain V. Costes, Artem L. Ponomarev, James L. Chen, David Nguyen, Francis A. Cucinotta, Mary Helen Barcellos-Hoff:
Image-Based Modeling Reveals Dynamic Redistribution of DNA Damage into Nuclear Sub-Domains. PLoS Comput. Biol. 3(8) (2007)
Coauthor Index
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