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Michael J. Keiser
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2020 – today
- 2024
- [j11]Zachary J. Gale-Day, Laura Shub, Kangway V. Chuang, Michael J. Keiser:
Proximity Graph Networks: Predicting Ligand Affinity with Message Passing Neural Networks. J. Chem. Inf. Model. 64(14): 5439-5450 (2024) - [j10]Brendan W. Hall, Michael J. Keiser:
Retrieval Augmented Docking Using Hierarchical Navigable Small Worlds. J. Chem. Inf. Model. 64(19): 7398-7408 (2024) - [i6]Mahdi Ghorbani, Leo Gendelev, Paul Beroza, Michael J. Keiser:
Autoregressive fragment-based diffusion for pocket-aware ligand design. CoRR abs/2401.05370 (2024) - 2023
- [j9]John H. Morris, Karthik Soman, Rabia E. Akbas, Xiaoyuan Zhou, Brett Smith, Elaine C. Meng, Conrad C. Huang, Gabriel Cerono, Gundolf Schenk, Angela Rizk-Jackson, Adil Harroud, Lauren M. Sanders, Sylvain V. Costes, Krish Bharat, Arjun Chakraborty, Alexander R. Pico, Taline Mardirossian, Michael J. Keiser, Alice Tang, Josef Hardi, Yongmei Shi, Mark A. Musen, Sharat Israni, Sui Huang, Peter W. Rose, Charlotte A. Nelson, Sergio E. Baranzini:
The scalable precision medicine open knowledge engine (SPOKE): a massive knowledge graph of biomedical information. Bioinform. 39(2) (2023) - 2022
- [j8]Sergio E. Baranzini, Katy Börner, John H. Morris, Charlotte A. Nelson, Karthik Soman, Erica Schleimer, Michael J. Keiser, Mark A. Musen, Roger Pearce, Tahsin Reza, Brett Smith, Bruce William Herr II, Boris Oskotsky, Angela Rizk-Jackson, Katherine P. Rankin, Stephan J. Sanders, Riley Bove, Peter W. Rose, Sharat Israni, Sui Huang:
A Biomedical Open Knowledge Network Harnesses the Power of AI to Understand Deep Human Biology. AI Mag. 43(1): 46-58 (2022) - [j7]Alexandre V. Fassio, Laura Shub, Luca Ponzoni, Jessica McKinley, Matthew J. O'Meara, Rafaela Salgado Ferreira, Michael J. Keiser, Raquel Cardoso de Melo Minardi:
Prioritizing Virtual Screening with Interpretable Interaction Fingerprints. J. Chem. Inf. Model. 62(18): 4300-4318 (2022) - [j6]Daniel R. Wong, Jay Conrad, Noah R. Johnson, Jacob Ayers, Annelies Laeremans, Joanne C. Lee, Jisoo Lee, Stanley B. Prusiner, Sourav Bandyopadhyay, Atul J. Butte, Nick A. Paras, Michael J. Keiser:
Trans-channel fluorescence learning improves high-content screening for Alzheimer's disease therapeutics. Nat. Mach. Intell. 4(6): 583-595 (2022) - [i5]William Connell, Umair Khan, Michael J. Keiser:
A single-cell gene expression language model. CoRR abs/2210.14330 (2022) - [i4]Mikio Tada, Maria L. Wei, Michael J. Keiser:
Learning Melanocytic Cell Masks from Adjacent Stained Tissue. CoRR abs/2211.00646 (2022) - 2021
- [j5]Albert T. Young, Kristen Fernandez, Jacob Pfau, Rasika Reddy, Nhat Anh Cao, Max Y. von Franque, Arjun Johal, Benjamin V. Wu, Rachel R. Wu, Jennifer Y. Chen, Raj P. Fadadu, Juan A. Vasquez, Andrew Tam, Michael J. Keiser, Maria L. Wei:
Stress testing reveals gaps in clinic readiness of image-based diagnostic artificial intelligence models. npj Digit. Medicine 4 (2021) - [i3]Jacob Pfau, Albert T. Young, Jerome Wei, Maria L. Wei, Michael J. Keiser:
Robust Semantic Interpretability: Revisiting Concept Activation Vectors. CoRR abs/2104.02768 (2021) - 2020
- [j4]Elena L. Cáceres, Nicholas C. Mew, Michael J. Keiser:
Adding Stochastic Negative Examples into Machine Learning Improves Molecular Bioactivity Prediction. J. Chem. Inf. Model. 60(12): 5957-5970 (2020) - [i2]Kangway V. Chuang, Michael J. Keiser:
Attention-Based Learning on Molecular Ensembles. CoRR abs/2011.12820 (2020)
2010 – 2019
- 2019
- [i1]Jacob Pfau, Albert T. Young, Maria L. Wei, Michael J. Keiser:
Global Saliency: Aggregating Saliency Maps to Assess Dataset Artefact Bias. CoRR abs/1910.07604 (2019) - 2018
- [j3]John J. Irwin, Garrett Gaskins, Teague Sterling, Michael M. Mysinger, Michael J. Keiser:
Predicted Biological Activity of Purchasable Chemical Space. J. Chem. Inf. Model. 58(1): 148-164 (2018)
2000 – 2009
- 2009
- [j2]James Corey Adams, Michael J. Keiser, Li Basuino, Henry F. Chambers, Deok-Sun Lee, Olaf G. Wiest, Patricia C. Babbitt:
A Mapping of Drug Space from the Viewpoint of Small Molecule Metabolism. PLoS Comput. Biol. 5(8) (2009) - 2008
- [j1]Jérôme Hert, Michael J. Keiser, John J. Irwin, Tudor I. Oprea, Brian K. Shoichet:
Quantifying the Relationships among Drug Classes. J. Chem. Inf. Model. 48(4): 755-765 (2008)
Coauthor Index
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