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Brett G. Olivier
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2020 – today
- 2022
- [j15]Bilal Shaikh
, Lucian P. Smith
BioSimulators: a central registry of simulation engines and services for recommending specific tools. Nucleic Acids Res. 50(W1): 108-114 (2022) - [i4]Bilal Shaikh, Lucian P. Smith, Dan Vasilescu, Gnaneswara Marupilla, Michael Wilson, Eran Agmon, Henry Agnew, Steven S. Andrews, Azraf Anwar, Moritz E. Beber, Frank T. Bergmann, David Brooks, Lutz Brusch, Laurence Calzone, Kiri Choi, Joshua Cooper, John Detloff, Brian Drawert, Michel Dumontier, G. Bard Ermentrout, James R. Faeder, Andrew P. Freiburger, Fabian Fröhlich
BioSimulators: a central registry of simulation engines and services for recommending specific tools. CoRR abs/2203.06732 (2022)
2010 – 2019
- 2019
- [j14]Maxwell Lewis Neal
Harmonizing semantic annotations for computational models in biology. Briefings Bioinform. 20(2): 540-550 (2019) - [j13]Michael Hucka
The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 2 Core Release 2. J. Integr. Bioinform. 16(2) (2019) - 2018
- [j12]Frank T. Bergmann
Simulation Experiment Description Markup Language (SED-ML) Level 1 Version 3 (L1V3). J. Integr. Bioinform. 15(1) (2018) - [j11]Michael Hucka
The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 1 Core. J. Integr. Bioinform. 15(1) (2018) - [j10]Michael Hucka
The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 2 Core. J. Integr. Bioinform. 15(1) (2018) - [j9]Brett G. Olivier
SBML Level 3 Package: Flux Balance Constraints version 2. J. Integr. Bioinform. 15(1) (2018) - 2016
- [i3]Brett G. Olivier, Bas Teusink:
Modelling? Using Standards Can Help You. ERCIM News 2016(104) (2016) - [i2]Haydee Artaza
Top 10 metrics for life science software good practices. F1000Research 5: 2000 (2016) - 2015
- [j8]Arne C. Reimers, Frank J. Bruggeman
Fast Flux Module Detection Using Matroid Theory. J. Comput. Biol. 22(5): 414-424 (2015) - [j7]Michael Hucka
Systems Biology Markup Language (SBML) Level 2 Version 5: Structures and Facilities for Model Definitions. J. Integr. Bioinform. 12(2) (2015) - [j6]Brett G. Olivier
The Systems Biology Markup Language (SBML) Level 3 Package: Flux Balance Constraints. J. Integr. Bioinform. 12(2) (2015) - [j5]Timo R. Maarleveld, Meike T. Wortel
Interplay between Constraints, Objectives, and Optimality for Genome-Scale Stoichiometric Models. PLoS Comput. Biol. 11(4) (2015) - 2014
- [j4]Frank T. Bergmann
COMBINE archive and OMEX format: one file to share all information to reproduce a modeling project. BMC Bioinform. 15: 369 (2014) - [c1]Arne C. Müller, Frank J. Bruggeman, Brett G. Olivier
Fast Flux Module Detection Using Matroid Theory. RECOMB 2014: 192-206 - [i1]Frank T. Bergmann, Richard Adams, Stuart L. Moodie, Jonathan Cooper, Mihai Glont, Martin Golebiewski, Michael Hucka, Camille Laibe, Andrew K. Miller, David P. Nickerson, Brett G. Olivier, Nicolas Rodriguez, Herbert M. Sauro, Martin Scharm, Stian Soiland-Reyes, Dagmar Waltemath, Florent Yvon, Nicolas Le Novère:
COMBINE archive: One File To Share Them All. CoRR abs/1407.4992 (2014) - 2012
- [j3]Joost Boele
FAME, the Flux Analysis and Modeling Environment. BMC Syst. Biol. 6: 8 (2012)
2000 – 2009
- 2005
- [j2]Brett G. Olivier
Modelling cellular systems with PySCeS. Bioinform. 21(4): 560-561 (2005) - 2004
- [j1]Brett G. Olivier
Web-based kinetic modelling using JWS Online. Bioinform. 20(13): 2143-2144 (2004)
Coauthor Index
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