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Frank J. Bruggeman
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2020 – today
- 2023
- [j13]David D. van Niekerk
, Erik Rust, Frank J. Bruggeman
Is distance from equilibrium a good indicator for a reaction's flux control? Biosyst. 232: 104988 (2023) - [j12]Frank J. Bruggeman
Whole-cell metabolic control analysis. Biosyst. 234: 105067 (2023) - 2021
- [j11]Tom J. Clement, Erik B. Baalhuis, Bas Teusink
Unlocking Elementary Conversion Modes: ecmtool Unveils All Capabilities of Metabolic Networks. Patterns 2(1): 100177 (2021) - 2020
- [j10]Steven A. Frank
The Fundamental Equations of Change in Statistical Ensembles and Biological Populations. Entropy 22(12): 1395 (2020) - [j9]Daan H. de Groot
Elementary Growth Modes provide a molecular description of cellular self-fabrication. PLoS Comput. Biol. 16(1) (2020) - [i2]Steven A. Frank, Frank J. Bruggeman:
The fundamental equations of change in statistical ensembles and biological populations. CoRR abs/2010.14544 (2020)
2010 – 2019
- 2019
- [j8]Daan H. de Groot
The number of active metabolic pathways is bounded by the number of cellular constraints at maximal metabolic rates. PLoS Comput. Biol. 15(3) (2019) - 2018
- [j7]Meike T. Wortel
Metabolic enzyme cost explains variable trade-offs between microbial growth rate and yield. PLoS Comput. Biol. 14(2) (2018) - [j6]Robert Planqué
Maintaining maximal metabolic flux by gene expression control. PLoS Comput. Biol. 14(9) (2018) - 2015
- [j5]Arne C. Reimers, Frank J. Bruggeman
Fast Flux Module Detection Using Matroid Theory. J. Comput. Biol. 22(5): 414-424 (2015) - [j4]Timo R. Maarleveld, Meike T. Wortel
Interplay between Constraints, Objectives, and Optimality for Genome-Scale Stoichiometric Models. PLoS Comput. Biol. 11(4) (2015) - [j3]Katja N. Rybakova, Frank J. Bruggeman
Multiplex Eukaryotic Transcription (In)activation: Timing, Bursting and Cycling of a Ratchet Clock Mechanism. PLoS Comput. Biol. 11(4) (2015) - 2014
- [c2]Arne C. Müller, Frank J. Bruggeman, Brett G. Olivier
Fast Flux Module Detection Using Matroid Theory. RECOMB 2014: 192-206 - 2011
- [c1]Hans Lehrach, Ralf Sudbrak, Peter Boyle
ITFoM - The IT Future of Medicine. FET 2011: 26-29 - [i1]Rainer Breitling, Frank J. Bruggeman, Corrado Priami, Adelinde M. Uhrmacher:
Formal Methods in Molecular Biology (Dagstuhl Seminar 11151). Dagstuhl Reports 1(4): 41-64 (2011)
2000 – 2009
- 2009
- [j2]Frank J. Bruggeman
Noise Management by Molecular Networks. PLoS Comput. Biol. 5(9) (2009) - 2005
- [j1]Fred C. Boogerd
Emergence and Its Place in Nature: A Case Study of Biochemical Networks. Synth. 145(1): 131-164 (2005)
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