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Nucleic Acids Research, Volume 25
Volume 25, Number 1, January 1997
- Dennis A. Benson, Mark S. Boguski, David J. Lipman, James Ostell:
GenBank. 1-6 - Guenter Stoesser, Peter Sterk, Mary Ann Tuli, Peter Stoehr, Graham Cameron:
The EMBL Nucleotide Sequence Database. 7-14 - Yoshio Tateno, Takashi Gojobori:
DNA Data Bank of Japan in the age of information biology. 14-17 - Carol Harger, Marian Skupski, Ethan Allen, Christopher Clark, David Crowley, Emily Dickinson, David Easley, Ada Espinosa-Lujan, Andrew D. Farmer, Chris A. Fields
, Leandrita Flores, Lynn Harris, Gifford Keen, Maurice Manning, Michael P. McLeod, John O'Neill, Maria Pumilia, Rhonda Reinert, David Rider, John Rohrlich, Yolanda Romero, Jolene Schwertfeger, Gustavo Seluja, Adam C. Siepel
The Genome Sequence DataBase version 1.0 (GSDB): from low pass sequences to complete genomes. 18-23 - David G. George, Robert J. Dodson, John S. Garavelli
The Protein Information Resource (PIR) and the PIR-International Protein Sequence Database. 24-28 - Hans-Werner Mewes
MIPS: a database for protein sequences, homology data and yeast genome information. 28-30 - Amos Bairoch
The SWISS-PROT protein sequence data bank and its supplement TrEMBL. 31-36 - Evgeni Selkov, Miliusha Galimova, Igor Goryanin
The metabolic pathway collection: an update. 37-38 - Manfred Kröger, Ralf Wahl:
Compilation of DNA sequences of Escherichia coli K12: description of the interactive databases ECD and ECDC (update 1996). 39-42 - Peter D. Karp
EcoCyc: Enyclopedia of Escherichia coli Genes and Metabolism. 43-51 - Monica Riley:
Genes and proteins of Escherichia coli K-12 (GenProtEC). 51-52 - Guy Perrière, Ivan Moszer, Takashi Gojobori:
The NRSub database: update 1997. 53-56 - William E. Payne, James I. Garrels:
Yeast Protein database (YPD): a database for the complete proteome of Saccharomyces cerevisiae. 57-62 - William M. Gelbart, Madeline A. Crosby, Beverley Matthews, W. P. Rindone, J. Chillemi, S. Russo Twombly, David B. Emmert, Michael Ashburner, Rachel A. Drysdale, E. Whitfield, Gillian H. Millburn, A. de Grey, Thomas C. Kaufman, K. Matthews, David R. Gilbert, Victor B. Strelets, C. Tolstoshev:
FlyBase: a Drosophila database. The FlyBase consortium. Nucleic Acids Res. 25(1): 63-66 (1997) - Bernard Jacq, Florence Horn, Florence Janody
GIF-DB, a WWW database on gene interactions involved in Drosophila melanogaster development. 67-71 - Kenneth H. Fasman, Stanley Letovsky, Peter W. D. Li, Robert W. Cottingham
The GDB Human Genome Database Anno 1997. 72-81 - Patricia Rodriguez-Tomé, Philip Lijnzaad:
The Radiation Hybrid Database. 81-84 - Judith A. Blake
The Mouse Genome Database (MGD). A comprehensive public resource of genetic, phenotypic and genomic data. The Mouse Genome Informatics Group. 85-91 - Maria Giuseppina Campi, Mirco Castoldi
Molecular Probe Data Base (MPDB). 92-95 - Thomas Specht, Maciej Szymanski
Compilation of 5S rRNA and 5S rRNA gene sequences. 96-97 - Jian Gu
Small RNA database. 98-102 - Christian Zwieb:
The uRNA database. 102-103 - Augustine E. Souza, Thomas Hermann, H. Ulrich Göringer:
The guide RNA database. 104-106 - Christian Zwieb, Niels Larsen:
The Signal Recognition Particle Database (SRPDB). 107-108 - Bonnie L. Maidak, Gary J. Olsen, Niels Larsen, Ross A. Overbeek, Michael J. McCaughey, Carl R. Woese:
The RDP (Ribosomal Database Project). 109-111 - Yves Van de Peer
Database on the structure of small ribosomal subunit RNA. 111-116 - Peter De Rijk, Yves Van de Peer
Database on the structure of large ribosomal subunit RNA. 117-122 - Daniel A. Lafontaine, Stéphane Mercure, Jean-Pierre Perreault:
Update of the viroid and viroid-like sequence database: addition of a hepatitis delta virus RNA section. 123-125 - Pamela F. Crain, James A. McCloskey:
The RNA modification database. 126-127 - Geoffrey Kemball-Cook, Edward G. D. Tuddenham
The Factor VIII Mutation Database on the World Wide Web: the haemophilia A mutation, search, test and resource site. HAMSTeRS update (version 3.0). 128-132 - F. Giannelli, P. M. Green, S. S. Sommer, M.-C. Poon, M. Ludwig, Rainer Schwaab, Pieter H. Reitsma, M. Goossens, A. Yoshioka, M. S. Figueiredo, George G. Brownlee:
Haemophilia B: database of point mutations and short additions and deletions, 7th edition. 133-135 - Neal F. Cariello, George R. Douglas, Mark J. Dycaico, Nancy J. Gorelick, G. Scott Provost, Thierry Soussi
Databases and software for the analysis of mutations in the human p53 gene, the human hprt gene and both the lacI and lacZ gene in transgenic rodents. 136-137 - Christophe Béroud
p53 and APC gene mutations: software and databases. 138 - Piotr M. Nowacki, Susan Byck, Lynne Prevost, Charles R. Scriver:
The PAH mutation analysis consortium database: update 1996. 139-142 - Xavier Cousin
The alpha/beta fold family of proteins database and the cholinesterase gene server ESTHER. 143-146 - Gwenaëlle Collod-Béroud, Christophe Béroud
Marfan Database (second edition): software and database for the analysis of mutations in the human FBN1 gene. 147-150 - Pierre Hainaut
Database of p53 gene somatic mutations in human tumors and cell lines: updated compilation and future prospects. 151-157 - Bruce Gottlieb, Mark Trifiro, Rose Lumbroso, Leonard Pinsky:
The androgen receptor gene mutations database. Nucleic Acids Res. 25(1): 158-162 (1997) - Elisabeth Martinez, David D. Moore, Evan Keller, David Pearce, Vincent Robinson, Paul N. MacDonald, S. Stoney Simons Jr., Eddie Sanchez, Mark Danielsen
The Nuclear Receptor Resource Project. 163-165 - Mathilde Varret
Software and database for the analysis of mutations in the human LDL receptor gene. 172-180 - Raymond Dalgleish
The human type I collagen mutation database. 181-187 - Kathleen L. Triman, Brian J. Adams:
Expansion of the 16S and 23S ribosomal RNA mutation databases (16SMDB and 23SMDB). 188-191 - Franklin Hutchinson, J. Edward Donnellan Jr.:
A mutation spectra database for bacterial and mammalian genes. 192-195 - Andreas M. Kogelnik, Marie T. Lott
MITOMAP: an update on the status of the human mitochondrial genome database. 196-199 - D. Calo, A. Depascali, D. Sasanelli, F. Tanzariello, Mila Tommaseo Ponzetta, Cecilia Saccone, Marcella Attimonelli:
MmtDB: a Metazoa mitochondrial DNA variants database. 200-205 - Véronique Giudicelli
IMGT, the international ImMunoGeneTics database. 206-211 - Terri K. Attwood, Michael E. Beck, Alan J. Bleasby, Kirill Degtyarenko, A. D. Michie, David J. Parry-Smith:
Novel developments with the PRINTS protein fingerprint database. 212-217 - Amos Bairoch
The PROSITE database, its status in 1997. 217-221 - Jorja G. Henikoff, Shmuel Pietrokovski
Recent enhancements to the Blocks Database servers. 222-225 - Reinhard Schneider, Antoine de Daruvar, Chris Sander:
The HSSP database of protein structure-sequence alignments. 226-230 - Liisa Holm
Dali/FSSP classification of three-dimensional protein folds. 231-234 - Martin Reczko
An update of the DEF database of protein fold class predictions. 235 - Tim J. P. Hubbard, Alexey G. Murzin, Steven E. Brenner, Cyrus Chothia:
SCOP: a structural classification of proteins database. 236-239 - Péter Fábián, János Murvai, Zsolt Hátsági, Kristian Vlahovicek
The SBASE protein domain library, release 5.0: a collection of annotated protein sequence segments. 240-243 - Yasukazu Nakamura
Codon usage tabulated from the international DNA sequence databases. 244-245 - Mark E. Dalphin
The translational signal database, TransTerm: more organisms, complete genomes. 246-247 - Richard J. Roberts
REBASE-restriction enzymes and methylases. 248-262 - James W. Brown:
The ribonuclease P database. 263-264 - Edgar Wingender
TRANSFAC, TRRD and COMPEL: towards a federated database system on transcriptional regulation. 265-268 - Vladimir Brusic
MHCPEP, a database of MHC-binding peptides: update 1996. 269-271 - Andreas D. Baxevanis, David Landsman
Histone and histone fold sequences and structures: a database. 272-273 - Péter Fábián, Kirill Degtyarenko:
The directory of P450-containing systems in 1996. 274-277 - Jan E. Hansen, Ole Lund
O-GLYCBASE version 2.0: a revised database of O-glycosylated proteins. 278-282
Volume 25, Number 13, July 1997
- Brooke Lustig, Shalini Arora, Robert L. Jernigan
RNA base-amino acid interaction strengths derived from structures and sequences. 2562-2565 - Ju-Gyeong Kang
Identification of sigma factors for growth phase-related promoter selectivity of RNA polymerases from Streptomyces coelicolor A3(2). 2566-2573 - A. Slama-Schwok, F. Peronnet
A macrocyclic bis-acridine shifts the equilibrium from duplexes towards DNA hairpins. 2574-2581 - Joseph D. Ng, Yurii G. Kuznetsov, Alexander J. Malkin, Gérard Keith, Richard Giegé, Alexander McPherson:
Visualization of RNA crystal growth by atomic force microscopy. 2582-2588 - Eric E. Turner
The POU-domain factor Brn-3.0 recognizes characteristic sites in the herpes simplex virus genome. 2589-2594 - Nam W. Kim, Fred Wu:
Advances in quantification and characterization of telomerase activity by the telomeric repeat amplification protocol (TRAP). 2595-2597 - Oliver D. von Stein, Wolf-Gerolf Thies, Martin Hofmann:
A high throughput screening for rarely transcribed differentially expressed genes. 2598-2602 - Xuejun Huang, Francisco J. López de Saro, John D. Helmann
sigma factor mutations affecting the sequence-selective interaction of RNA polymerase with -10 region single-stranded DNA. 2603-2609 - Monique Turmel
Evolutionarily conserved and functionally important residues in the I- CeuI homing endonuclease. 2610-2619 - Louise E. Bird
Characterization and crystallization of the helicase domain of bacteriophage T7 gene 4 protein. 2620-2626 - Maria R. Conte, Graeme L. Conn, Tom Brown, Andrew N. Lane:
Conformational properties and thermodynamics of the RNA duplex r(CGCAAAUUUGCG)2: comparison with the DNA analogue d(CGCAAATTTGCG)2. 2627-2634 - Toru Matsukawa, Hiroki Kawasaki, Makoto Tanaka, Yoshiki Ohba:
Analysis of chromatin structure of rat alpha1-acid glycoprotein gene; changes in DNase I hypersensitive sites after thyroid hormone, glucocorticoid hormone and turpentine oil treatment. 2635-2639 - Tomoko Kubori
Physical interference between escherichia coli RNA polymerase molecules transcribing in tandem enhances abortive synthesis and misincorporation. 2640-2647 - Lyuba Benimetskaya, Myriam Berton, Alexander Kolbanovsky
Formation of a G-tetrad and higher order structures correlates with biological activity of the RelA (NF-kappaB p65) 'antisense' oligodeoxynucleotide. 2648-2656 - Irina Afonina, Maris Zivarts, Igor Kutyavin, Eugeny Lukhtanov, Howard Gamper, Rich B. Meyer:
Efficient priming of PCR with short oligonucleotides conjugated to a minor groove binder. 2657-2660 - Brian D. Hendrich
Identification and characterization of the human XIST gene promoter: implications for models of X chromosome inactivation. 2661-2671 - Raymond A. Petryshyn, Andrea G. Ferrenz, Jinhe Li:
Characterization and mapping of the double-stranded regions involved in activation of PKR within a cellular RNA from 3T3-F442A cells. 2672-2678 - David A. Wright, Sei-Kyoung Park, Dongying Wu, Gregory J. Phillips, Steven R. Rodermel, Daniel F. Voytas
Recovery of YAC-end sequences through complementation of an Escherichia coli pyrF mutation. 2679-2680 - Michael J. O'Neill, Andrew H. Sinclair
Isolation of rare transcripts by representational difference analysis. 2681-2682
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