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GWASTutorial Public
Forked from Cloufield/GWASTutorialGWAS Tutorial for Beginners
Jupyter Notebook UpdatedJan 7, 2025 -
linux-bash-commands Public
Forked from trinib/Linux-Bash-CommandsUltimate list of Linux bash commands, cheatsheets and resources
MIT License UpdatedSep 11, 2024 -
geneviewer Public
Forked from nvelden/geneviewerAn R package designed for drawing gene arrow maps
R Other UpdatedSep 10, 2024 -
rnabio.org Public
Forked from griffithlab/rnabio.orgwebsite for the rnaseq course
SCSS MIT License UpdatedMay 13, 2024 -
ggcoverage Public
Forked from showteeth/ggcoverageVisualize and annotate genomic coverage with ggplot2
R Other UpdatedApr 15, 2024 -
pyani Public
Forked from widdowquinn/pyaniApplication and Python module for average nucleotide identity analyses of microbes.
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funannotate Public
Forked from nextgenusfs/funannotateEukaryotic Genome Annotation Pipeline
Python BSD 2-Clause "Simplified" License UpdatedMar 2, 2024 -
catch Public
Forked from broadinstitute/catchA package for designing compact and comprehensive capture probe sets.
Python MIT License UpdatedJan 25, 2024 -
RforMassSpectrometry Public
Forked from rformassspectrometry/RforMassSpectrometryThe R for Mass Spectrometry meta-package
R UpdatedDec 24, 2023 -
GAAS Public
Forked from NBISweden/GAASGenome Assembly and Annotation Service code
Perl GNU General Public License v3.0 UpdatedDec 18, 2023 -
ggkegg Public
Forked from noriakis/ggkeggAnalyzing and visualizing KEGG information using the grammar of graphics
R MIT License UpdatedNov 10, 2023 -
learning_vcf_file Public
Forked from davetang/learning_vcf_fileLearning the Variant Call Format
Perl MIT License UpdatedSep 13, 2023 -
profile_dists Public
Forked from phac-nml/profile_distsProfile Dists: Convenient package for comparing genetic similarity of samples based on allelic profiles
Python Apache License 2.0 UpdatedJun 30, 2023 -
RforProteomics Public
Forked from lgatto/RforProteomicsUsing R and Bioconductor packages for the analysis and comprehension of proteomics data.
TeX UpdatedMay 12, 2023 -
CAFE5 Public
Forked from hahnlab/CAFE5Version 5 of the CAFE phylogenetics software
C++ Other UpdatedApr 17, 2023 -
juicer Public
Forked from aidenlab/juicerA One-Click System for Analyzing Loop-Resolution Hi-C Experiments
Shell MIT License UpdatedFeb 3, 2023 -
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gmap Public
Forked from mschemmel/gmapAn R package to visualize genetic maps.
R MIT License UpdatedOct 29, 2022 -
awesome-genome-visualization Public
Forked from cmdcolin/awesome-genome-visualizationA list of interesting genome browser or genome-browser-like implementations
TypeScript UpdatedOct 7, 2022 -
bioicons Public
Forked from duerrsimon/bioiconsA library of free open source icons for science illustrations in biology and chemistry
Vue MIT License UpdatedMay 21, 2022 -
GenomeAnnotation Public
Forked from darencard/GenomeAnnotationVarious scripts that I have created that are useful for genome annotation (repeats & proteins)
Shell GNU General Public License v3.0 UpdatedFeb 21, 2022 -
reCOGnizer Public
Forked from iquasere/reCOGnizerA tool for domain based annotation with databases from the Conserved Domains Database
Python BSD 3-Clause "New" or "Revised" License UpdatedFeb 2, 2022 -
KEGGCharter Public
Forked from iquasere/KEGGCharterA tool for representing genomic potential and transcriptomic expression into KEGG pathways
Python BSD 3-Clause "New" or "Revised" License UpdatedFeb 1, 2022 -
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gggenomes Public
Forked from thackl/gggenomesA grammar of graphics for comparative genomics
R MIT License UpdatedNov 30, 2021 -
bcbb Public
Forked from chapmanb/bcbbIncubator for useful bioinformatics code, primarily in Python and R
Python UpdatedNov 18, 2021 -
lastz Public
Forked from lastz/lastzProgram for aligning DNA sequences, a pairwise aligner.
C MIT License UpdatedOct 1, 2021 -
mummer2circos Public
Forked from metagenlab/mummer2circosCircular bacterial genome plots based on BLAST or NUCMER/PROMER alignments
Python UpdatedSep 8, 2021 -
primer3web Public
Forked from primer3-org/primer3webPrimer3Web is a simple web interface to primer3.
HTML GNU General Public License v2.0 UpdatedAug 18, 2021 -
16S-rDNA-V3-V4 Public
Forked from ycl6/16S-rDNA-V3-V416S rDNA V3-V4 amplicon sequencing analysis using dada2, phyloseq, LEfSe, picrust2 and other tools. Demo: https://ycl6.github.io/16S-Demo/
R GNU General Public License v3.0 UpdatedJul 19, 2021
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