Predicting the equilibrium protein folding pathway: structure-based analysis of staphylococcal nuclease (Q73134800)

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1 November 2019

title

Predicting the equilibrium protein folding pathway: structure-based analysis of staphylococcal nuclease (English)

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1 November 2019

Hilser VJ

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1 November 2019

Freire E

series ordinal

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publication date

1 February 1997

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1 November 2019

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volume

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issue

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1 November 2019

page(s)

171-183

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Principles that govern the folding of protein chains

1 November 2019

cites work

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%28199702%2927%3A2%3C171%3A%3AAID-PROT3%3E3.0.CO%3B2-J

Funnels, pathways, and the energy landscape of protein folding: a synthesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%28199702%2927%3A2%3C171%3A%3AAID-PROT3%3E3.0.CO%3B2-J

Navigating the folding routes

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%28199702%2927%3A2%3C171%3A%3AAID-PROT3%3E3.0.CO%3B2-J

Correlation between the amide proton exchange rates and the denaturation temperatures in globular proteins related to the basic pancreatic trypsin inhibitor

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%28199702%2927%3A2%3C171%3A%3AAID-PROT3%3E3.0.CO%3B2-J

Hydrogen exchange in native and denatured states of hen egg-white lysozyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%28199702%2927%3A2%3C171%3A%3AAID-PROT3%3E3.0.CO%3B2-J

Guanidinium chloride induction of partial unfolding in amide proton exchange in RNase A.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%28199702%2927%3A2%3C171%3A%3AAID-PROT3%3E3.0.CO%3B2-J

Hydrogen exchange identifies native-state motional domains important in protein folding

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%28199702%2927%3A2%3C171%3A%3AAID-PROT3%3E3.0.CO%3B2-J

Protein internal flexibility and global stability: Effect of urea on hydrogen exchange rates of bovine pancreatic trypsin inhibitor

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%28199702%2927%3A2%3C171%3A%3AAID-PROT3%3E3.0.CO%3B2-J

Hydrogen exchange in unligated and ligated staphylococcal nuclease

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%28199702%2927%3A2%3C171%3A%3AAID-PROT3%3E3.0.CO%3B2-J

Protein folding intermediates: native-state hydrogen exchange

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%28199702%2927%3A2%3C171%3A%3AAID-PROT3%3E3.0.CO%3B2-J

Structural basis of the stability of a lysozyme molten globule

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%28199702%2927%3A2%3C171%3A%3AAID-PROT3%3E3.0.CO%3B2-J

Assessment of Stability Differences in the Protein G B1 and B2 Domains From Hydrogen-Deuterium Exchange: Comparison with Calorimetric Data

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%28199702%2927%3A2%3C171%3A%3AAID-PROT3%3E3.0.CO%3B2-J

Temperature and pH dependences of hydrogen exchange and global stability for ovomucoid third domain

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%28199702%2927%3A2%3C171%3A%3AAID-PROT3%3E3.0.CO%3B2-J

The molten globule state as a clue for understanding the folding and cooperativity of globular-protein structure.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%28199702%2927%3A2%3C171%3A%3AAID-PROT3%3E3.0.CO%3B2-J

Intermediates in the folding reactions of small proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%28199702%2927%3A2%3C171%3A%3AAID-PROT3%3E3.0.CO%3B2-J

Structural energetics of the molten globule state

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%28199702%2927%3A2%3C171%3A%3AAID-PROT3%3E3.0.CO%3B2-J

Compact Intermediate States in Protein Folding

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%28199702%2927%3A2%3C171%3A%3AAID-PROT3%3E3.0.CO%3B2-J

Thermodynamics of Partly Folded Intermediates in Proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%28199702%2927%3A2%3C171%3A%3AAID-PROT3%3E3.0.CO%3B2-J

Molecular basis of cooperativity in protein folding. V. Thermodynamic and structural conditions for the stabilization of compact denatured states

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%28199702%2927%3A2%3C171%3A%3AAID-PROT3%3E3.0.CO%3B2-J

Structure based prediction of protein folding intermediates

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%28199702%2927%3A2%3C171%3A%3AAID-PROT3%3E3.0.CO%3B2-J

Thermodynamic characterization of an equilibrium folding intermediate of staphylococcal nuclease

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%28199702%2927%3A2%3C171%3A%3AAID-PROT3%3E3.0.CO%3B2-J

Structure-based calculation of the equilibrium folding pathway of proteins. Correlation with hydrogen exchange protection factors.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%28199702%2927%3A2%3C171%3A%3AAID-PROT3%3E3.0.CO%3B2-J

Thermodynamic mapping of the inhibitor site of the aspartic protease endothiapepsin

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%28199702%2927%3A2%3C171%3A%3AAID-PROT3%3E3.0.CO%3B2-J

Docking enzyme-inhibitor complexes using a preference-based free-energy surface

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%28199702%2927%3A2%3C171%3A%3AAID-PROT3%3E3.0.CO%3B2-J

The crystal structure of the ternary complex of staphylococcal nuclease, Ca2+, and the inhibitor pdTp, refined at 1.65 A

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%28199702%2927%3A2%3C171%3A%3AAID-PROT3%3E3.0.CO%3B2-J

The crystal structure of staphylococcal nuclease refined at 1.7 A resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%28199702%2927%3A2%3C171%3A%3AAID-PROT3%3E3.0.CO%3B2-J

Temperature dependence of the hydrophobic interaction in protein folding

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%28199702%2927%3A2%3C171%3A%3AAID-PROT3%3E3.0.CO%3B2-J

Validity of the "two-state" hypothesis for conformational transitions of proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%28199702%2927%3A2%3C171%3A%3AAID-PROT3%3E3.0.CO%3B2-J

Denaturant m values and heat capacity changes: relation to changes in accessible surface areas of protein unfolding

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%28199702%2927%3A2%3C171%3A%3AAID-PROT3%3E3.0.CO%3B2-J

Staphylococcal nuclease folding intermediate characterized by hydrogen exchange and NMR spectroscopy

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%28199702%2927%3A2%3C171%3A%3AAID-PROT3%3E3.0.CO%3B2-J

Formation of a molten globule intermediate early in the kinetic folding pathway of apomyoglobin

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%28199702%2927%3A2%3C171%3A%3AAID-PROT3%3E3.0.CO%3B2-J

Structural characterization of folding intermediates in cytochrome c by H-exchange labelling and proton NMR.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%28199702%2927%3A2%3C171%3A%3AAID-PROT3%3E3.0.CO%3B2-J

Different subdomains are most protected from hydrogen exchange in the molten globule and native states of human alpha-lactalbumin

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%28199702%2927%3A2%3C171%3A%3AAID-PROT3%3E3.0.CO%3B2-J

NMR evidence for an early framework intermediate on the folding pathway of ribonuclease A

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%28199702%2927%3A2%3C171%3A%3AAID-PROT3%3E3.0.CO%3B2-J

Primary structure effects on peptide group hydrogen exchange

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%28199702%2927%3A2%3C171%3A%3AAID-PROT3%3E3.0.CO%3B2-J

Protein hydrogen exchange in denaturant: quantitative analysis by a two-process model

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%28199702%2927%3A2%3C171%3A%3AAID-PROT3%3E3.0.CO%3B2-J

A nuclear magnetic resonance study of the hydrogen-exchange behaviour of lysozyme in crystals and solution

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%28199702%2927%3A2%3C171%3A%3AAID-PROT3%3E3.0.CO%3B2-J

Effects of amino acid substitutions on the pressure denaturation of staphylococcal nuclease as monitored by fluorescence and nuclear magnetic resonance spectroscopy

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%28199702%2927%3A2%3C171%3A%3AAID-PROT3%3E3.0.CO%3B2-J

Proline isomerism in staphylococcal nuclease characterized by NMR and site-directed mutagenesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%28199702%2927%3A2%3C171%3A%3AAID-PROT3%3E3.0.CO%3B2-J

Solution studies of staphylococcal nuclease H124L. 2. 1H, 13C, and 15N chemical shift assignments for the unligated enzyme and analysis of chemical shift changes that accompany formation of the nuclease-thymidine 3',5'-bisphosphate-calcium ternary c

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%28199702%2927%3A2%3C171%3A%3AAID-PROT3%3E3.0.CO%3B2-J

The heat capacity of proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%28199702%2927%3A2%3C171%3A%3AAID-PROT3%3E3.0.CO%3B2-J

Estimation of changes in side chain configurational entropy in binding and folding: general methods and application to helix formation.

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1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%28199702%2927%3A2%3C171%3A%3AAID-PROT3%3E3.0.CO%3B2-J

10.1002/(SICI)1097-0134(199702)27:2<171::AID-PROT3>3.0.CO;2-J

21 January 2018

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1 November 2019

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