Requirements for DNA hairpin formation by RAG1/2 (Q35652497)

9 August 2017

title

Requirements for DNA hairpin formation by RAG1/2 (English)

1 reference

9 August 2017

Gabrielle J Grundy

1 reference

9 August 2017

Joanne E Hesse

series ordinal

1 reference

9 August 2017

Martin Gellert

series ordinal

1 reference

9 August 2017

language of work or name

English

0 references

publication date

16 February 2007

1 reference

Proceedings of the National Academy of Sciences of the United States of America

9 August 2017

1 reference

inferred from page(s)

published in

1 reference

9 August 2017

volume

104

1 reference

9 August 2017

1 reference

9 August 2017

page(s)

3078-3083

1 reference

describes a project that uses

9 August 2017

ImageQuant

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC1805602/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

cites work

Single-strand recombination signal sequence nicks in vivo: evidence for a capture model of synapsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805602

Active site sharing and subterminal hairpin recognition in a new class of DNA transposases

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805602

Mixing active-site components: a recipe for the unique enzymatic activity of a telomere resolvase.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805602

The C-terminal portion of RAG2 protects against transposition in vitro

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805602

A RAG-1/RAG-2 tetramer supports 12/23-regulated synapsis, cleavage, and transposition of V(D)J recombination signals

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805602

Footprint analysis of recombination signal sequences in the 12/23 synaptic complex of V(D)J recombination

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805602

Ordered assembly of the V(D)J synaptic complex ensures accurate recombination

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805602

V(D)J recombination: RAG proteins, repair factors, and regulation

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805602

Mutational analysis of all conserved basic amino acids in RAG-1 reveals catalytic, step arrest, and joining-deficient mutants in the V(D)J recombinase

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805602

Assembly of the RAG1/RAG2 synaptic complex

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805602

Structure and evolution of the hAT transposon superfamily

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805602

Determinants for hairpin formation in Tn10 transposition

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805602

Comparative architecture of transposase and integrase complexes

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805602

A C-terminal region of RAG1 contacts the coding DNA during V(D)J recombination.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805602

Conditional RAG-1 mutants block the hairpin formation step of V(D)J recombination

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805602

Three-dimensional structure of the Tn5 synaptic complex transposition intermediate

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805602

Mutations of acidic residues in RAG1 define the active site of the V(D)J recombinase

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805602

Mutational analysis of RAG1 and RAG2 identifies three catalytic amino acids in RAG1 critical for both cleavage steps of V(D)J recombination

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805602

Mechanistic basis for coding end sequence effects in the initiation of V(D)J recombination

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805602

Detection of RAG protein-V(D)J recombination signal interactions near the site of DNA cleavage by UV cross-linking

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805602

DNA transposition by the RAG1 and RAG2 proteins: a possible source of oncogenic translocations

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805602

Transposition mediated by RAG1 and RAG2 and its implications for the evolution of the immune system

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805602

V(D)J recombination signal recognition: distinct, overlapping DNA-protein contacts in complexes containing RAG1 with and without RAG2.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805602

Functional Analysis of Coordinated Cleavage in V(D)J Recombination

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805602

Characterization of the Putative Transposase mRNA of Tag1, Which Is Ubiquitously Expressed in Arabidopsis and Can Be Induced by Agrobacterium-Mediated Transformation With dTag1 DNA

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805602

Stimulation of V(D)J cleavage by high mobility group proteins

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805602

V(D)J recombination: modulation of RAG1 and RAG2 cleavage activity on 12/23 substrates by whole cell extract and DNA-bending proteins

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805602

DNA sequence and structure requirements for cleavage of V(D)J recombination signal sequences

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805602

Distinct DNA sequence and structure requirements for the two steps of V(D)J recombination signal cleavage

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805602

The RAG1 and RAG2 proteins establish the 12/23 rule in V(D)J recombination

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805602

Initiation of V(D)J recombination in vitro obeying the 12/23 rule

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805602

Coding end sequence can markedly affect the initiation of V(D)J recombination

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805602

Expression and V(D)J recombination activity of mutated RAG-1 proteins

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805602

Somatic generation of antibody diversity

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805602

Cleavage at a V(D)J recombination signal requires only RAG1 and RAG2 proteins and occurs in two steps

12 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0611293104

Identification of two catalytic residues in RAG1 that define a single active site within the RAG1/RAG2 protein complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0611293104

Transposition of hAT elements links transposable elements and V(D)J recombination.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0611293104

Mutational analysis of the base flipping event found in Tn5 transposition

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0611293104

Molecular architecture of a eukaryotic DNA transposase.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0611293104

RAG-1 mutations that affect the target specificity of V(D)j recombination: a possible direct role of RAG-1 in site recognition.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0611293104

Amino acid residues in Rag1 crucial for DNA hairpin formation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0611293104

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0611293104

Tn10 transposition via a DNA hairpin intermediate

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17307873

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

RAG1/2-mediated resolution of transposition intermediates: two pathways and possible consequences

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17307873

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.0611293104

1 reference

9 August 2017

0 references

1 reference

9 August 2017

1 reference