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21 pages, 3776 KiB  
Article
Spatial Distribution Characteristics of Micronutrients and Their Deficiency Effect on the Root Morphology and Architecture in Citrus Rootstock
by Gaofeng Zhou, Yiping Fu, Mei Yang, Yanhong Li and Jing Zhang
Plants 2025, 14(2), 158; https://doi.org/10.3390/plants14020158 (registering DOI) - 8 Jan 2025
Abstract
Roots play essential roles in the acquisition of water and minerals from soils in higher plants. However, water or nutrient limitation can alter plant root morphology. To clarify the spatial distribution characteristics of essential nutrients in citrus roots and the influence mechanism of [...] Read more.
Roots play essential roles in the acquisition of water and minerals from soils in higher plants. However, water or nutrient limitation can alter plant root morphology. To clarify the spatial distribution characteristics of essential nutrients in citrus roots and the influence mechanism of micronutrient deficiency on citrus root morphology and architecture, especially the effects on lateral root (LR) growth and development, two commonly used citrus rootstocks, trifoliate orange (Poncirus trifoliata L. Raf., Ptr) and red tangerine (Citrus reticulata Blanco, Cre), were employed here. The analysis of the mineral nutrient distribution characteristics in different root parts showed that, except for the P concentrations in Ptr, the last two LR levels (second and third LRs) had the highest macronutrient concentrations. All micronutrient concentrations in the second and third LRs of Ptr were higher than those of Cre, except for the Zn concentration in the second LR, which indicates that Ptr requires more micronutrients to maintain normal root system growth and development. Principal component analysis (PCA) showed that B and P were very close in terms of spatial distribution and that Mo, Mn, Cu, and Fe contributed significantly to PC1, while B, Cu, Mo, and Zn contributed significantly to PC2 in both rootstocks. These results suggest that micronutrients are major factors in citrus root growth and development. The analysis of root morphology under micronutrient deficiency showed that root growth was more significantly inhibited in Ptr and Cre under Fe deficiency (FeD) than under other micronutrient deficiencies, while Cre roots exhibited better performance than Ptr roots. From the perspective of micronutrient deficiency, FeD and B deficiency (BD) inhibited all root morphological traits in Ptr and Cre except the average root diameter, while Mn deficiency (MnD) and Zn deficiency (ZnD) had lesser impacts, as well as the morphology of the stem. The mineral nutrient concentrations in Ptr and Cre seedlings under micronutrient deficiency revealed that single micronutrient deficiencies affected both their own concentrations and the concentrations of other mineral nutrients, whether in the roots or in stems and leaves. Dynamic analysis of LR development revealed that there were no significant decreases in either the first or second LR number in Ptr seedlings under BD and ZnD stress. Moreover, the growth rates of first and second LRs in Ptr and Cre did not significantly decrease compared with the control under short-term (10 days) BD stress. Altogether, these results indicate that micronutrients play essential roles in citrus root growth and development. Moreover, citrus alters its root morphology and biological traits as a nutrient acquisition strategy to maintain maximal micronutrient acquisition and growth. The present work on the spatial distribution characteristics and micronutrient deficiency of citrus roots provides a theoretical basis for effective micronutrient fertilization and the diagnosis of micronutrient deficiency in citrus. Full article
(This article belongs to the Special Issue Innovative Techniques for Citrus Cultivation)
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Figure 1
<p>Nutrient distribution in different root parts of trifoliate orange (Ptr) and red tangerine (Cre) seedlings. (<b>A</b>) P concentration; (<b>B</b>) K concentration; (<b>C</b>) Ca concentration; (<b>D</b>) Mg concentration; (<b>E</b>) Fe concentration; (<b>F</b>) Mn concentration; (<b>G</b>) B concentration; (<b>H</b>) Zn concentration; (<b>I</b>) Cu concentration; (<b>J</b>) Mo concentration. Data are presented as the mean ± SE of six biological replicates. Different lowercase and uppercase letters above the bars indicate significant differences (<span class="html-italic">p</span> &lt; 0.05) between the different root parts and the citrus rootstock species, respectively.</p>
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<p>Principal component analysis (<b>A</b>) and loading scatter plot (<b>B</b>) of 10 elements in different root parts of trifoliate orange and red tangerine seedlings. Green symbols in (<b>A</b>) represent red tangerine, and black symbols represent trifoliate orange; green symbols in (<b>B</b>) represent micronutrients, and red symbols represent macronutrients. The red circle in subfigure (<b>B</b>) indicated that the correlation between nutrient elements was significant.</p>
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<p>Scanned images of the root morphology of two types of citrus rootstocks under different micronutrient deficiency conditions. Ptr: trifoliate orange, Cre: red tangerine, CK: control, FeD: iron deficiency, MnD: manganese deficiency, BD: boron deficiency, and ZnD: zinc deficiency. Bar = 2 cm.</p>
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<p>Root system architecture response to micronutrient deficiency stress in trifoliate orange (Ptr) and red tangerine (Cre) seedlings. (<b>A</b>) Taproot length; (<b>B</b>) Total root length; (<b>C</b>) Root surface area; (<b>D</b>) Root volume; (<b>E</b>) Average root diameter. Data are presented as the mean ± SE of six biological replicates. Different lowercase letters above the bars indicate significant differences (<span class="html-italic">p</span> &lt; 0.05) between the different root parts and the citrus rootstock species, respectively. CK: control, FeD: iron deficiency, MnD: manganese deficiency, BD: boron deficiency, and ZnD: zinc deficiency.</p>
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<p>Effects of micronutrient deficiency on the distribution and ratio of root length and root surface area in trifoliate orange (Ptr, <b>A</b>,<b>C</b>) and red tangerine (Cre, <b>B</b>,<b>D</b>) seedlings. Data are presented as mean ± SE of six biological replicates. Different lowercase letters above the bars indicate significant differences (<span class="html-italic">p</span> &lt; 0.05) between the different root parts and the citrus rootstock species, respectively. Significance of analysis of variance (ANOVA): * <span class="html-italic">p</span> &lt; 0.05; ** <span class="html-italic">p</span> &lt; 0.01. CK: control, FeD: iron deficiency, MnD: manganese deficiency, BD: boron deficiency, and ZnD: zinc deficiency.</p>
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<p>Effects of micronutrient deficiency on the distribution and ratio of root volume in trifoliate orange (Ptr) and red tangerine (Cre) seedlings. (<b>A</b>,<b>B</b>) Root volume distribution and their ratio of Ptr; (<b>C</b>,<b>D</b>) Root volume distribution and their ratio of Cre. Data are presented as mean ± SE of six biological replicates. Different lowercase letters above the bars indicate significant differences (<span class="html-italic">p</span> &lt; 0.05) between the different root parts and the citrus rootstock species, respectively. CK: control, FeD: iron deficiency, MnD: manganese deficiency, BD: boron deficiency, and ZnD: zinc deficiency.</p>
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<p>Effects of micronutrient deficiency on macronutrient concentrations (%) in the leaves and roots of trifoliate orange and red tangerine seedlings. P concentration in leaf (<b>A</b>) and root (<b>E</b>); K concentration in leaf (<b>B</b>) and root (<b>F</b>); Ca concentration in leaf (<b>C</b>) and root (<b>G</b>); Mg concentration in leaf (<b>D</b>) and root (<b>H</b>).Trifoliate orange (Ptr) and red tangerine (Cre) seedlings were grown under different micronutrient deficiency conditions for 12 weeks. Data are presented as means ± SE of nine replicates (n = 9, one plant for each replicate). Different lowercase letters above the bars indicate significant differences (<span class="html-italic">p</span> &lt; 0.05) between different growth conditions. CK: control, FeD: iron deficiency, MnD: manganese deficiency, BD: boron deficiency, and ZnD: zinc deficiency.</p>
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<p>Effects of micronutrient deficiency on the micronutrient concentrations (mg/kg DW) in the leaves and roots of trifoliate orange and red tangerine seedlings. Fe concentration in leaf (<b>A</b>) and root (<b>B</b>); Mn concentration in leaf (<b>C</b>) and root (<b>D</b>); B concentration in leaf (<b>E</b>) and root (<b>F</b>); Zn concentration in leaf (<b>G</b>) and root (<b>H</b>); Cu concentration in leaf (<b>I</b>) and root (<b>J</b>); Mo concentration in leaf (<b>K</b>) and root (<b>L</b>). Trifoliate orange (Ptr) and red tangerine (Cre) seedlings were grown under different micronutrient deficiency conditions for 12 weeks. Data are presented as means ± SE of nine replicates (n = 9, one plant for each replicate). Different lowercase letters above the bars indicate significant differences (<span class="html-italic">p</span> &lt; 0.05) between different growth conditions. CK: control, FeD: iron deficiency, MnD: manganese deficiency, BD: boron deficiency, and ZnD: zinc deficiency.</p>
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<p>Effects of micronutrient deficiency on the mineral nutrient concentrations in the stems of trifoliate orange and red tangerine seedlings. (<b>A</b>) P concentration; (<b>B</b>) K concentration; (<b>C</b>) Ca concentration; (<b>D</b>) Mg concentration; (<b>E</b>) Fe concentration; (<b>F</b>) Mn concentration; (<b>G</b>) B concentration; (<b>H</b>) Zn concentration; (<b>I</b>) Cu concentration; (<b>J</b>) Mo concentration. Trifoliate orange (Ptr) and red tangerine (Cre) seedlings were grown under different micronutrient deficiency conditions for 12 weeks. Data are presented as means ± SE of nine replicates (n = 9, one plant for each replicate). Different lowercase letters above the bars indicate significant differences (<span class="html-italic">p</span> &lt; 0.05) between different growth conditions. CK: control, FeD: iron deficiency, MnD: manganese deficiency, BD: boron deficiency, and ZnD: zinc deficiency.</p>
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<p>Dynamic analysis of the lateral root growth rates of trifoliate orange (Ptr) and red tangerine (Cre) seedlings under micronutrient deficiency conditions. (<b>A</b>) The primary lateral root growth rate of Ptr; (<b>B</b>) The secondary lateral root growth rate of Ptr; (<b>C</b>) The primary lateral root growth rate of Cre; (<b>D</b>) The secondary lateral root growth rate of Cre. Trifoliate orange and red tangerine seedlings were grown under different micronutrient deficiency conditions for 40 days. CK: control, FeD: iron deficiency, MnD: manganese deficiency, BD: boron deficiency, and ZnD: zinc deficiency. All results regarding the per-plant root growth rate data are the average value (±SD) from nine seedlings.</p>
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19 pages, 4349 KiB  
Article
Seasonal Dynamics of Planktonic Algae in the Danjiangkou Reservoir: Nutrient Fluctuations and Ecological Implications
by Mengyao Wu, Hailong Yan, Songhan Fu, Xiaxian Han, Mengzhao Jia, Miaomiao Dou, Han Liu, Nicola Fohrer, Beata Messyasz and Yuying Li
Sustainability 2025, 17(2), 406; https://doi.org/10.3390/su17020406 (registering DOI) - 7 Jan 2025
Abstract
Freshwater reservoirs serve as vital water sources for numerous residential areas. However, the excessive presence of nutrients, such as nitrogen and phosphorus, stimulates rapid algal proliferation, leading to the occurrence of algal blooms. To prevent this phenomenon, it is imperative to conduct regular [...] Read more.
Freshwater reservoirs serve as vital water sources for numerous residential areas. However, the excessive presence of nutrients, such as nitrogen and phosphorus, stimulates rapid algal proliferation, leading to the occurrence of algal blooms. To prevent this phenomenon, it is imperative to conduct regular ecological surveys aimed at assessing water quality and monitoring the dynamic composition of aquatic biological communities within the reservoir’s ecosystem. In this study, seasonal changes in water quality parameters and the spatial and temporal distribution of planktonic algae at 14 sampling sites in the Danjiangkou reservoir were analyzed. A total of 136 taxonomic units of planktonic algae were identified, belonging to 8 phyla, 41 families, and 88 genera, with the dominant algae belonging to the phyla Chlorophyta, Bacillariophyta, and Cyanophyta. The order of abundance of the algae was summer > autumn > spring > winter and Hanku > Intake > Danku > Outflow. WT, pH, DO, CODMn, and Chl a were the primary drivers influencing the changes in the planktonic algal community within the reservoir. Two dominant algae, Chlamydomonas debaryana and Scenedesmus quadricauda, were isolated and cultured indoors to simulate the growth behaviors of algae in the Danjiangkou reservoir. The results show that the growth of C. debaryana was severely limited by the temperature, light, and nutrient concentration, whereas the growth of S. quadricauda was slightly affected under different temperature and light conditions and could occur at low concentrations of nitrogen and phosphorus nutrients. With excess nutrient levels, excessive proliferation of S. quadricauda could potentially cause algal blooms. This study examined the growth characteristics of the dominant algae in the Danjiangkou reservoir under laboratory conditions and delved into their interdependencies with environmental factors, aiming to furnish a theoretical and experimental foundation for investigating algal community dynamics and preventing algal blooms within the freshwater reservoir. Full article
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<p>Overview of the distribution of the sampling points in the Danjiangkou reservoir.</p>
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<p>Characteristics of spatial and temporal distribution of planktonic algae in the Danjiangkou reservoir: Species composition (<b>A</b>). Temporal distribution characteristics (<b>B</b>). Spatial distribution characteristics (<b>C</b>). Diversity (<b>D</b>).</p>
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<p>Correlation analysis between dominant algae and environmental factors.</p>
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<p>Microscopic observation and molecular identification of two dominant algal species: Microscopic observation (<b>A</b>,<b>B</b>) and evolutionary tree analysis (<b>C</b>) of CH−1. Microscopic observation (<b>D</b>,<b>E</b>) and evolutionary tree analysis (<b>F</b>) of CH−2.</p>
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<p>Effects of temperature on the growth behavior of <span class="html-italic">C. debaryana</span> and <span class="html-italic">S. quadricauda</span>. The cell density OD 680 (<b>A</b>,<b>D</b>), The content of Chl a (<b>B</b>,<b>E</b>), The content of Carotenoid (<b>C</b>,<b>F</b>). The quantitative data are presented as the means ± S.Ds. (<span class="html-italic">n</span> = 3).</p>
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<p>Effects of light on the growth behavior of <span class="html-italic">C. debaryana</span> and <span class="html-italic">S. quadricauda</span>. The cell density OD 680 (<b>A</b>,<b>D</b>), The content of Chl a (<b>B</b>,<b>E</b>), The content of Carotenoid (<b>C</b>,<b>F</b>). The quantitative data are presented as the means ± S.Ds. (<span class="html-italic">n</span> = 3).</p>
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<p>Effects of nitrogen on the growth behavior of <span class="html-italic">C. debaryana</span> and <span class="html-italic">S. quadricauda</span>. The cell density OD 680 (<b>A</b>,<b>D</b>), The content of Chl a (<b>B</b>,<b>E</b>), The content of Carotenoid (<b>C</b>,<b>F</b>). The quantitative data are presented as the means ± S.Ds. (<span class="html-italic">n</span> = 3).</p>
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<p>Effects of phosphorus on the growth behavior of <span class="html-italic">C. debaryana</span> and <span class="html-italic">S. quadricauda</span>. The cell density OD 680 (<b>A</b>,<b>D</b>), The content of Chl a (<b>B</b>,<b>E</b>), The content of Carotenoid (<b>C</b>,<b>F</b>). The quantitative data are presented as the means ± S.Ds. (<span class="html-italic">n</span> = 3).</p>
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15 pages, 1812 KiB  
Article
Boosted Bio-Oil Production and Sustainable Energy Resource Recovery Through Optimizing Oxidative Pyrolysis of Banana Waste
by Rohit K. Singh, Bhavin Soni, Urvish Patel, Asim K. Joshi and Sanjay K. S. Patel
Fuels 2025, 6(1), 3; https://doi.org/10.3390/fuels6010003 - 7 Jan 2025
Abstract
The increasing need for sustainable waste management and abundant availability of banana tree waste, a byproduct of widespread banana cultivation, have driven interest in biomass conversion through clean fuels. This study investigates the oxidative pyrolysis of banana tree waste to optimize process parameters [...] Read more.
The increasing need for sustainable waste management and abundant availability of banana tree waste, a byproduct of widespread banana cultivation, have driven interest in biomass conversion through clean fuels. This study investigates the oxidative pyrolysis of banana tree waste to optimize process parameters and enhance bio-oil production. Experiments were conducted using a fluidized bed reactor at temperatures ranging from 450 °C to 550 °C, with oxygen to biomass (O/B) ratios varying from 0.05 to 0.30. The process efficiently converts this low-cost, renewable biomass into valuable products and aims to reduce energy intake during pyrolysis while maximizing the yield of useful products. The optimal conditions were identified at an O/B ratio of 0.1 and a temperature of 500 °C, resulting in a product distribution of 26.4 wt% for bio-oil, 20.5 wt% for bio-char, and remaining pyro-gas. The bio-oil was rich in oxygenated compounds, while the bio-char demonstrated a high surface area and nutrient content, making it suitable for various applications. The pyro-gas primarily consisted of carbon monoxide and carbon dioxide, with moderate amounts of hydrogen and methane. This study supports the benefits of oxidative pyrolysis for waste utilization through a self-heat generation approach by partial feed combustion providing the internal heat required for the process initiation that can be aligned with the principles of a circular economy to achieve environmental responsibility. Full article
(This article belongs to the Special Issue Biofuels and Bioenergy: New Advances and Challenges)
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<p>Illustration of the experimental set-up as a self-heat generation by partial feed combustion provides the internal heat required for the process initiation.</p>
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<p>TG and DTG curve of banana waste pyrolysis.</p>
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<p>Banana mix waste fluidized bed pyrolysis product yield distribution with varying processing temperatures.</p>
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<p>Effect of ER ratio on banana mix waste pyrolysis products in a fluidised bed reactor at a temperature of 500 °C.</p>
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<p>A relative percentage of the different component groups in bio-oil derived from banana mix waste obtained at 500 °C.</p>
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<p>The concentration variation of pyrolytic gas components over 60 min after stable operation (20 min).</p>
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19 pages, 11895 KiB  
Article
Mapping Spatial Variability of Sugarcane Foliar Nitrogen, Phosphorus, Potassium and Chlorophyll Concentrations Using Remote Sensing
by Ericka F. Picado, Kerin F. Romero and Muditha K. Heenkenda
Geomatics 2025, 5(1), 3; https://doi.org/10.3390/geomatics5010003 - 5 Jan 2025
Viewed by 294
Abstract
Various nutrients are needed during the sugarcane growing season for plant development and productivity. However, traditional methods for assessing nutritional status are often costly and time consuming. This study aimed to determine the level of nitrogen (N), phosphorus (P), potassium (K) and chlorophyll [...] Read more.
Various nutrients are needed during the sugarcane growing season for plant development and productivity. However, traditional methods for assessing nutritional status are often costly and time consuming. This study aimed to determine the level of nitrogen (N), phosphorus (P), potassium (K) and chlorophyll of sugarcane plants using remote sensing. Remotely sensed images were obtained using a MicaSense RedEdge-P camera attached to a drone. Leaf chlorophyll content was measured in the field using an N-Tester chlorophyll meter, and leaf samples were collected and analyzed in the laboratory for N, P and K. The highest correlation between field samples and predictor variables (spectral bands, selected vegetation indices, and plant height from Light Detection and Ranging (LiDAR)), were noted.The spatial distribution of chlorophyll, N, P, and K maps achieved 60%, 75%, 96% and 50% accuracies, respectively. The spectral profiles helped to identify areas with visual differences. Spatial variability of nutrient maps confirmed that moisture presence leads to nitrogen and potassium deficiencies, excess phosphorus, and a reduction in vegetation density (93.82%) and height (2.09 m), compared to green, healthy vegetation (97.64% density and 3.11 m in height). This robust method of assessing foliar nutrients is repeatable for the same sugarcane variety at certain conditions and leads to sustainable agricultural practices in Costa Rica. Full article
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<p>Study area map, location and sampling plot details.</p>
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<p>The project workflow.</p>
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<p>(<b>a</b>) Orthomosaic covering one of the sample plots; and (<b>b</b>) classified orthomosaic to extract sugarcane coverage.</p>
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<p>Normal distribution analysis. (<b>a</b>) Index plot, (<b>b</b>) boxplot, (<b>c</b>) histogram, and (<b>d</b>) qq-plot.</p>
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<p>Nutritional variability. (<b>A</b>) Sugarcane coverage; (<b>B</b>) chlorophyll; (<b>C</b>) nitrogen; (<b>D</b>) phosphorus; and (<b>E</b>) potassium content.</p>
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<p>Average spectral profile for healthy green areas and areas with light green or brownish leaves.</p>
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<p>Nutritional variability map. (<b>A</b>) Chlorophyll; (<b>B</b>) nitrogen; (<b>C</b>) phosphorus; and (<b>D</b>) potassium content.</p>
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14 pages, 276 KiB  
Article
Exploring the Potential Effects of Soybean By-Product (Hulls) and Enzyme (Beta-Mannanase) on Laying Hens During Peak Production
by Muhammad Shuaib, Abdul Hafeez, Deependra Paneru, Woo Kyun Kim, Muhammad Tahir, Anthony Pokoo-Aikins, Obaid Ullah and Abubakar Sufyan
Animals 2025, 15(1), 98; https://doi.org/10.3390/ani15010098 - 4 Jan 2025
Viewed by 275
Abstract
This study determined the interaction between soybean hulls (SHs) and enzymes (β-mannanase) to improve the sustainability and efficacy of feeding programs for laying hens during peak production while ensuring the best health and efficiency. In a completely randomized design (CRD), 200 golden-brown hens [...] Read more.
This study determined the interaction between soybean hulls (SHs) and enzymes (β-mannanase) to improve the sustainability and efficacy of feeding programs for laying hens during peak production while ensuring the best health and efficiency. In a completely randomized design (CRD), 200 golden-brown hens were fed for four weeks (33 to 36 weeks) and randomly distributed into four groups, each containing four replicates of ten birds, with one group receiving a control diet (P0) and the others receiving diets that contained four combinations of SHs and enzymes (ENZs). e.g., 3% SHs and 0.02 g/kg ENZs (P1), 3% SHs and 0.03 g/kg ENZs (P2), 9% SHs and 0.02 g/kg ENZs (P3), and 9% SHs and 0.03 g/kg ENZs (P4). Although most egg quality measures remained similar, the P2 group showed enhanced (p = 0.630) egg weight, albumen weight, and height. Moreover, the P2 group improved gut (p < 0.05) shape by increasing villus width, height, crypt depth, and surface area throughout intestinal sections, while the P4 group markedly improved total cholesterol and LDL (p = 0.022) levels. The P1, P2, and P4 groups exhibited a significant enhancement in dry matter (p = 0.022) and crude fiber (p = 0.046) digestibility, while the P2 group demonstrated superior crude protein digestibility (p = 0.032), and the P1 and P2 groups showed increased crude fat digestibility compared to the other groups. In conclusion, adding 3% of SHs and 30 mg/kg of ENZs (β-mannanase) to the feed may help laying hens, enhance gut health and some egg quality indices, and decrease blood cholesterol and LDL levels without compromising nutrient digestibility. Full article
24 pages, 4223 KiB  
Article
Spatial Changes in Soil Nutrients in Tea Gardens from the Perspective of South-to-North Tea Migration: A Case Study of Shangluo City
by Ziqi Shang, Jichang Han, Yonghua Zhao, Ziru Niu and Tingyu Zhang
Land 2025, 14(1), 74; https://doi.org/10.3390/land14010074 - 2 Jan 2025
Viewed by 310
Abstract
[Objective] This study focused on the primary tea-producing regions of Shangluo City (ranging from 108°34′20″ E to 111°1′25″ E and 33°2′30″ N to 34°24′40″ N), which include Shangnan County, Zhen’an County, Zhashui County, Danfeng County, and Shanyang County. The aim was to explore [...] Read more.
[Objective] This study focused on the primary tea-producing regions of Shangluo City (ranging from 108°34′20″ E to 111°1′25″ E and 33°2′30″ N to 34°24′40″ N), which include Shangnan County, Zhen’an County, Zhashui County, Danfeng County, and Shanyang County. The aim was to explore the characteristics and influencing factors of soil nutrient content variation across different tea gardens in the area. The study involved an analysis of various soil nutrient indicators and an investigation of their correlations to assess the nutrient status of tea gardens in Shangluo City. [Method] A total of 228 soil samples from these tea gardens were quantitatively analyzed for pH, soil organic matter (SOM), total nitrogen (TN), total phosphorus (TP), total potassium (TK), available nitrogen (AN), available phosphorus (AP), available potassium (AK), as well as clay, silt, and sand content. Additionally, the soil texture was qualitatively analyzed. Statistical methods including analysis of variance (ANOVA), correlation analysis, principal component analysis (PCA), and regression analysis were performed using SPSS software to examine the relationships between soil nutrients and texture in relation to altitude, latitude, and fertility status. [Results] The results indicated that the pH of tea garden soils in Shangluo City was relatively stable, ranging from 4.3 to 7.6, with the mean of 5.9 and a coefficient of variation of 11.0%. The soil organic matter (SOM) content varied from 7.491 to 81.783 g/kg, exhibiting a moderate variability with a coefficient of variation of 38.75%. The mean values for total nitrogen (TN), available nitrogen (AN), total phosphorus (TP), available phosphorus (AP), total potassium (TK), available potassium (AK), clay, silt, and sand were 1.53 g/kg, 213 mg/kg, 0.85 g/kg, 49.1 mg/kg, 5.5 g/kg, 110 mg/kg, 3.99, 44.89, and 51.11, respectively. AN and AP displayed higher coefficients of variation at 57% and 120.1%, respectively. Significant differences in pH, SOM, TN, TP, TK, silt, and sand were observed at varying elevations, while TN, TP, TK, clay, silt, and sand varied significantly across different latitudes. Principal component analysis (PCA) results revealed that altitude had four principal components with eigenvalues greater than 1, accounting for 71.366% of the total variance, whereas latitude exhibited five principal components with eigenvalues exceeding 1, explaining 76.304% of the total variance. Regression analysis indicated that altitude exerted a stronger influence on soil indicators, as demonstrated by a well-fitting model (Model 4), where the coefficients of principal components 1, 3, and 4 were positive, while that of principal component 2 was negative. In contrast, latitude influenced soil indicators most effectively in Model 3, where the coefficient of principal component 5 was positive, and the coefficients of principal components 1 and 4 were negative. [Conclusions] The variation in soil nutrients and pH in the tea gardens of Shangluo City is closely associated with altitude and latitude. Notably, there is no discernible trend of pH acidification. Therefore, tea garden management should prioritize the rational application of soil nutrients at varying altitudes and focus on enhancing soil texture at different latitudes to adapt to the diverse soil characteristics under these conditions, thereby promoting sustainable development in tea gardens. Full article
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Figure 1
<p>Overview of Shangluo City and distribution map of tea garden sampling points. (<b>a</b>) Location of the study area. (<b>b</b>) Kernel density map of sampling points in Shangluo City. (<b>c</b>) Altitude distribution map of tea garden sampling points in Shangluo City.</p>
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<p>Statistics of soil texture distribution at tea garden sampling points in Shangluo City.</p>
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<p>Statistics on the distribution of soil texture at different altitudes.</p>
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<p>Statistics on the distribution of soil texture in different latitudes.</p>
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<p>The correlation analysis chart between soil nutrients and soil texture. (<b>a</b>) The correlation between soil nutrients and soil texture with altitude. (<b>b</b>) The correlation between soil nutrients and soil texture with latitude.</p>
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<p>Correlation analysis between altitude and soil fertility factors.</p>
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<p>Correlation analysis between latitude and soil fertility factors.</p>
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<p>Principal component gravel map of altitude.</p>
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<p>Principal component gravel plot at latitude.</p>
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43 pages, 20613 KiB  
Article
Assessing the Black Sea Mesozooplankton Community Following the Nova Kakhovka Dam Breach
by Elena Bisinicu and Luminita Lazar
J. Mar. Sci. Eng. 2025, 13(1), 67; https://doi.org/10.3390/jmse13010067 - 2 Jan 2025
Viewed by 314
Abstract
In June 2023, following the breach of the Nova Kakhovka Dam during the Ukraine-Russia war, a comprehensive study was conducted along the Romanian Black Sea coast to assess water quality and mesozooplankton communities. Surface water analyses revealed significant gradients in nutrient levels and [...] Read more.
In June 2023, following the breach of the Nova Kakhovka Dam during the Ukraine-Russia war, a comprehensive study was conducted along the Romanian Black Sea coast to assess water quality and mesozooplankton communities. Surface water analyses revealed significant gradients in nutrient levels and salinity, particularly from north to south, influenced by the influx of freshwater and nutrients from riverine sources and the dam breach. Flooding was found to significantly impact nutrient dynamics and species distributions, with increased concentrations of SiO4 and NO3 in flooded stations. A strong relationship was observed between environmental factors and biological assemblages, with silicates identified as a key driver. Biodiversity patterns varied across regions, with the Shannon–Wiener Index indicating lower zooplankton diversity in transitional waters, reflecting environmental stress. Statistical methods, including correlation analysis, multidimensional scaling, t-tests, and canonical analysis, were employed to investigate the links between mesozooplankton communities and environmental variables. These findings underscore disruptions in trophic dynamics and ecosystem balance, emphasizing the need for integrated environmental management strategies to mitigate further degradation and foster the ecological recovery of the Black Sea. Full article
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<p>Map of the study area and Romanian EEZ (white) in the Black Sea region, stations affected by the floodwaters (red circle), and the Nova Kakhovka Dam location (black triangle).</p>
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<p>Seawater temperature plot by marine reporting units, surface of the Black Sea, June 2023.</p>
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<p>Salinity box plot by marine reporting units, surface of the Black Sea, June 2023.</p>
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<p>Spatial distribution of dissolved inorganic phosphorus (DIP) and box plot by marine reporting units, surface of the Black Sea, June 2023.</p>
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<p>Spatial distribution of dissolved silicate and box plot by marine reporting units, surface of the Black Sea, June 2023.</p>
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<p>Spatial distribution of dissolved inorganic nitrogen and box plot by marine reporting units, surface of the Black Sea, June 2023.</p>
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<p>Composition of identified taxa across different MRUs.</p>
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<p>Shade plot of taxa density and biomass across various sampling stations within transitional, coastal, and marine reporting units (MRUs).</p>
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<p>Histogram representing the distribution of the test statistic R from the MRU test.</p>
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<p>Species richness (<span class="html-italic">S</span>) and evenness (<span class="html-italic">J</span>′) across sampling stations, blue stations represent flooded sampling sites, June 2023.</p>
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<p>Shannon–Wiener diversity index (<span class="html-italic">H</span>′) values for zooplankton in June 2023, blue stations represent flooded sampling sites. Red—very poor quality, orange—poor quality, yellow—moderate quality, green—good quality.</p>
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<p>Shannon–Wiener diversity index (<span class="html-italic">H</span>′) values for zooplankton across MRUs in June 2023. Orange—poor quality, yellow—moderate quality.</p>
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<p>Spatial distribution of fodder zooplankton density (<b>upper</b>) and biomass (<b>lower</b>) along the coastal region in June 2023.</p>
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<p>Shade plots showing the distribution of fodder zooplankton in June 2023 across sampling stations. Upper—density (ind/m<sup>3</sup>), lower—biomass (mg/m<sup>3</sup>).</p>
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<p>Spatial distribution of nonfodder zooplankton density (<b>upper</b>) and biomass (<b>lower</b>) along the coastal region in June 2023.</p>
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<p>Non-metric multidimensional scaling (nMDS) plots illustrating the similarities in taxa density (ind/m<sup>3</sup>) and taxa biomass (mg/m<sup>3</sup>) between flooded (F) and non-flooded (NF) stations, June 2023.</p>
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<p>Fuzzy cognitive map—interactions between physicochemical parameters and mesozooplankton in Black Sea transitional waters.</p>
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<p>Fuzzy cognitive map—interactions between physicochemical parameters and mesozooplankton in Black Sea coastal waters.</p>
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<p>Fuzzy cognitive map—interactions between physicochemical parameters and mesozooplankton in Black Sea marine waters.</p>
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<p>Ecological status of Copepoda biomass indicator in the Black Sea, June 2023.</p>
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<p>Ecological status of mesozooplankton biomass indicator in the Black Sea, June 2023.</p>
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<p>Ecological status of <span class="html-italic">Noctiluca scintillans</span> biomass indicator in the Black Sea, June 2023.</p>
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<p>Integrated Index of Ecological Status of the Black Sea, June 2023, red—GES, green—Non-GES.</p>
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<p>Satellite image of the Black Sea region following the Nova Kakhovka Dam breach, 21 June 2023.</p>
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<p>Satellite image of chlorophyll concentrations in the Black Sea, 15 June 2023.</p>
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26 pages, 6972 KiB  
Article
Exposure to Subclinical Doses of Fumonisins, Deoxynivalenol, and Zearalenone Affects Immune Response, Amino Acid Digestibility, and Intestinal Morphology in Broiler Chickens
by Revathi Shanmugasundaram, Laharika Kappari, Mohammad Pilewar, Matthew K. Jones, Oluyinka A. Olukosi, Anthony Pokoo-Aikins, Todd J. Applegate and Anthony E. Glenn
Toxins 2025, 17(1), 16; https://doi.org/10.3390/toxins17010016 - 1 Jan 2025
Viewed by 544
Abstract
Fusarium mycotoxins often co-occur in broiler feed, and their presence negatively impacts health even at subclinical concentrations, so there is a need to identify the concentrations of these toxins that do not adversely affect chickens health and performance. The study was conducted to [...] Read more.
Fusarium mycotoxins often co-occur in broiler feed, and their presence negatively impacts health even at subclinical concentrations, so there is a need to identify the concentrations of these toxins that do not adversely affect chickens health and performance. The study was conducted to evaluate the least toxic effects of combined mycotoxins fumonisins (FUM), deoxynivalenol (DON), and zearalenone (ZEA) on the production performance, immune response, intestinal morphology, and nutrient digestibility of broiler chickens. A total of 960 one-day-old broilers were distributed into eight dietary treatments: T1 (Control); T2: 33.0 FUM + 3.0 DON + 0.8 ZEA; T3: 14.0 FUM + 3.5 DON + 0.7 ZEA; T4: 26.0 FUM + 1.0 DON + 0.2 ZEA; T5: 7.7 FUM + 0.4 DON + 0.1 ZEA; T6: 3.6 FUM + 2.5 DON + 0.9 ZEA; T7: 0.8 FUM + 1.0 DON + 0.3 ZEA; T8: 1.0 FUM + 0.5 DON + 0.1 ZEA, all in mg/kg diet. The results showed that exposure to higher mycotoxin concentrations, T2 and T3, had significantly reduced body weight gain (BWG) by 17% on d35 (p < 0.05). The T2, T3, and T4 groups had a significant decrease in villi length in the jejunum and ileum (p < 0.05) and disruption of tight junction proteins, occludin, and claudin-4 (p < 0.05). Higher mycotoxin groups T2 to T6 had a reduction in the digestibility of amino acids methionine (p < 0.05), aspartate (p < 0.05), and serine (p < 0.05); a reduction in CD4+, CD8+ T-cell populations (p < 0.05) and an increase in T regulatory cell percentages in the spleen (p < 0.05); a decrease in splenic macrophage nitric oxide production and total IgA production (p < 0.05); and upregulated cytochrome P450-1A1 and 1A4 gene expression (p < 0.05). Birds fed the lower mycotoxin concentration groups, T7 and T8, did not have a significant effect on performance, intestinal health, and immune responses, suggesting that these concentrations pose the least negative effects in broiler chickens. These findings are essential for developing acceptable thresholds for combined mycotoxin exposure and efficient feed management strategies to improve broiler performance. Full article
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<p>Representative hematoxylin and eosin-stained images of jejunum and ileum on d35.</p>
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<p>Effect of combined doses of mycotoxins on intestinal lesion score. Three birds from each pen were scored for intestinal lesions on d35, using a 0–3 scale: 0 being normal, 1 indicating a mild mucus covering the small intestine, 2 indicating a necrotic small intestinal mucosa, and 3 indicating sloughed cells and blood in the small intestinal mucosa and contents. Grey bar: lesion score of 0; red bar: lesion score of 1; lesion scores were analyzed with Chi-squared test (<span class="html-italic">p</span> &lt; 0.05).</p>
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<p>Effect of combined doses of mycotoxins on jejunal tight junction protein mRNA expression. All the mean values represent fold changes of up- and downregulated gene expression compared to the control group. Means (+SEM) with no common superscript differ significantly (<span class="html-italic">p</span> &lt; 0.05) (<span class="html-italic">n</span> = 6). Relative gene expression levels are shown for the jejunum (<b>A</b>): Occludin (<b>B</b>): Z−occluden (<b>C</b>): Claudin−1 (<b>D</b>): Claudin−2 (<b>E</b>): Claudin−4.</p>
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<p>Effect of combined doses of mycotoxins on splenic macrophage nitric oxide assay. On d14, d21, d28, and d35, the splenocyte MNCs (1 × 10<sup>5</sup> cells) were isolated and stimulated in vitro with 10 µg/mL of LPS for 48 h, and nitric oxide concentration was measured in the culture supernatant using the Griess assay. Means (+SEM) with no common superscript differ significantly (<span class="html-italic">p</span> &lt; 0.05) (<span class="html-italic">n</span> = 6).</p>
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<p>Effect of combined doses of mycotoxins on total bile IgA. Bile samples were analyzed for total IgA at d14, d21, d28, and d35 and expressed as optical density values. Means (+SEM) with no common superscript differ significantly (<span class="html-italic">p</span> &lt; 0.05) (<span class="html-italic">n</span> = 6).</p>
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<p>Effect of combined doses of mycotoxins on liver cytochrome mRNA expression. All the mean values represent fold changes of up- and downregulated gene expression compared to the control group. Means (+SEM) with no common superscript differ significantly (<span class="html-italic">p</span> &lt; 0.05) (<span class="html-italic">n</span> = 6). Relative expression levels are shown for liver (<b>A</b>) CYP-1A1, (<b>B</b>) CYP-1A2, and (<b>C</b>) CYP-1A4.</p>
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<p>Effect of combined doses of mycotoxins on liver cytokines mRNA expression. All the mean values represent fold changes compared to the control group. Means (+SEM) with no common superscript differ significantly (<span class="html-italic">p</span> &lt; 0.05) (<span class="html-italic">n</span> = 6). Relative expression levels are shown for liver (<b>A</b>) IL−1 and (<b>B</b>) IL−10.</p>
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19 pages, 4213 KiB  
Article
Soybean Water Monitoring and Water Demand Prediction in Arid Region Based on UAV Multispectral Data
by Shujie Jia, Mingyi Cui, Lei Chen, Shangyuan Guo, Hui Zhang, Zheyu Bai, Yaoyu Li, Linqiang Deng, Fuzhong Li and Wuping Zhang
Agronomy 2025, 15(1), 88; https://doi.org/10.3390/agronomy15010088 - 31 Dec 2024
Viewed by 260
Abstract
Soil moisture content is a key factor influencing plant growth and agricultural productivity, directly impacting water uptake, nutrient absorption, and stress resistance. This study proposes a rapid, low-cost, non-destructive method for dynamically monitoring soil moisture at depths of 0–200 cm throughout the crop [...] Read more.
Soil moisture content is a key factor influencing plant growth and agricultural productivity, directly impacting water uptake, nutrient absorption, and stress resistance. This study proposes a rapid, low-cost, non-destructive method for dynamically monitoring soil moisture at depths of 0–200 cm throughout the crop growth period under dryland conditions, with validation in soybean cultivation. During critical soybean growth stages, UAV multispectral data of the canopy were collected, and ground measurements were conducted for three GPS-referenced 50 cm × 50 cm plots to obtain canopy leaf water content, coverage, and soil volumetric moisture at 20 cm intervals. Ten vegetation indices were constructed from multispectral data to explore statistical relationships between vegetation indices, surface soil moisture, canopy leaf water content, and deeper soil moisture. Predictive models were developed and evaluated. Results showed that the NDVI-based nonlinear regression model achieved the best performance for leaf water content (R2 = 0.725), and a significant correlation was found between canopy leaf water content and 0–20 cm soil moisture (R2 = 0.705), enabling predictions of deeper soil moisture. Surface soil models accurately estimated 0–200 cm soil moisture distribution (R2 = 0.9995). Daily water dynamics simulations provided robust support for precision irrigation management. This study demonstrates that UAV multispectral remote sensing combined with ground sampling is a valuable tool for soybean water management, supporting precision agriculture and sustainable water resource utilization. Full article
(This article belongs to the Section Water Use and Irrigation)
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<p>Research areas.</p>
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<p>Technical roadmap.</p>
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<p>Comparison of simulated and measured values of canopy leaf water content by different vegetation indices.</p>
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<p>Comparison of actual and predicted soil water content at different depths.</p>
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<p>Distribution of errors in inversion of 0–200 cm soil moisture content in different surface layers.</p>
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<p>Pearson’s correlation coefficients of different spectral indices on soil surface water content map.</p>
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<p>Comparison of simulated and measured values of soil surface water content under bare soil with different spectral indices.</p>
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<p>Plot of changes in precipitation, water demand, soil water storage, and soil moisture gain/loss for soybeans during the whole reproductive period.</p>
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<p>(<b>A</b>) Spatial distribution of soil moisture at different depths of 0–200 cm on 14 May, 12 June, 10 July, 12 August, and 12 September. (<b>B</b>) Inversion maps of 0–20 cm soil moisture in soybean seed plants on 14 May (<b>a</b>), 12 June (<b>b</b>), 10 July (<b>c</b>), 12 August (<b>d</b>), 12 September (<b>e</b>).</p>
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21 pages, 7532 KiB  
Article
Stand Density Management of Cypress Plantations Based on the Influence of Soil Hydrothermal Conditions on Fine Root Dynamics in Southwestern China
by Guirong Hou, Jinfeng Zhang, Chuan Fan, Xianwei Li, Gang Chen, Kuangji Zhao, Yunqi Zhang, Jiangkun Zheng and Yong Wang
Forests 2025, 16(1), 46; https://doi.org/10.3390/f16010046 - 30 Dec 2024
Viewed by 367
Abstract
The mechanisms by which the soil physical structure, nutrient conditions, understory vegetation diversity and forest meteorological factors influence fine root (<2 mm diameter) characteristics mediated by soil moisture content (SMC) and soil heat flux (SHF) remain uncertain under climate change. Therefore, in this [...] Read more.
The mechanisms by which the soil physical structure, nutrient conditions, understory vegetation diversity and forest meteorological factors influence fine root (<2 mm diameter) characteristics mediated by soil moisture content (SMC) and soil heat flux (SHF) remain uncertain under climate change. Therefore, in this research, continuous observations were made of the fine root growth, death and turnover of cypress plantations, as well as the SMC and SHF under the management of four thinning intensities in hilly areas in central Sichuan from 2021 to 2023. The fine root data were obtained using the microroot canals (minirhizotron) in the study, and the soil hydrothermal data were obtained using the ECH2O soil parameter sensor and the PC-2R SHF data logger. In the time series, the fine root growth, death and turnover of the cypress plantations with different thinning intensities first increased and then decreased throughout the year; the vertical center of the gravity of the fine roots of cypress was concentrated in the 30–50 cm range. This research also revealed that the variability in the SMC decreased with increasing soil depth. Additionally, the SHF was transmitted from greater soil depths to the surface in unthinned cypress plantation at a rate of 0.036 per year, which decreased the heat in the fine root region. However, SHF was transmitted from the soil surface to greater depths at rates of 0.012 per year, 0.08 per year and 0.002 per year, which increased the heat in the fine root area. The redundancy analysis (RDA) and structural equation model (SEM) results indicated that the SMC and soil heat energy distribution pattern obviously affected fine root growth, death and turnover in the cypress plantation. However, the climate conditions in the forest, the characteristics of vegetation in the understory and the physical and chemical characteristics of the soil directly or indirectly affect the characteristics of the fine roots of cypress plantations with changes in thinning intensity. This research provides a basis for understanding ecosystem structure, nutrient cycling and carbon balance and may guide artificial plantation development and management. Full article
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<p>Location of the study site and sites of microroot canal installation. Note: Four thinning intensities were designed in this study and three standard plots under one thinning density. CK represents control plots with 0% thinning intensity, LIT represents test forest plots with 30% thinning intensity, MIT represents test forest plots with 50% thinning intensity, and HIT represents test forest plots with 70% thinning intensity. (<b>A</b>) represents using a microroot canal monitoring instrument (CI-600) to obtain fine root growth film, (<b>B</b>) represents four sites of microroot canal installation.</p>
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<p>Spatiotemporal variation in fine root growth in cypress plantations with different thinning intensities. (<b>A</b>) represents fine root growth rate of per month in four thinning intensities, (<b>B</b>) represents fine root growth rate during growing season in four thinning intensities, (<b>C</b>) represents fine root growth rate within nongrowing season in four thinning intensities, (<b>D</b>) represents annual fine root growth rate in four thinning intensities. (<b>E</b>,<b>F</b>) represent fine root growth rate in horizontal distance and vertical depth.</p>
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<p>Spatiotemporal variation in fine root mortality in cypress plantations with different thinning intensities. (<b>A</b>) represents fine root mortality of per month in four thinning intensities, (<b>B</b>) represents fine root mortality during growing season in four thinning intensities, (<b>C</b>) represents fine root mortality within nongrowing season in four thinning intensities, (<b>D</b>) represents annual fine root mortality in four thinning intensities. (<b>E</b>,<b>F</b>) represent fine root mortality in horizontal distance and vertical depth.</p>
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<p>Spatiotemporal variation in fine root turnover in cypress plantations with different thinning intensities. (<b>A</b>) represents fine root turnover rate of per month in four thinning intensities, (<b>B</b>) represents fine root turnover rate during growing season in four thinning intensities, (<b>C</b>) represents fine root turnover rate within nongrowing season in four thinning intensities, (<b>D</b>) represents annual fine root turnover rate in four thinning intensities. (<b>E</b>,<b>F</b>) represent fine root turnover rate in horizontal distance and vertical depth.</p>
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<p>Spatiotemporal distribution of the SMC in cypress plantations with different thinning intensities.</p>
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<p>Spatiotemporal distribution of SHF in cypress plantations with different thinning intensities.</p>
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<p>Effects of environmental factors on the fine root activity of cypress plantations.</p>
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<p>Soil hydrothermal conditions regulate the growth, death and turnover of fine roots in cypress plantations.</p>
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14 pages, 21334 KiB  
Article
Multifractal Analysis of Temporal Variation in Soil Pore Distribution
by Yanhui Jia, Yayang Feng, Xianchao Zhang and Xiulu Sun
Agronomy 2025, 15(1), 37; https://doi.org/10.3390/agronomy15010037 - 27 Dec 2024
Viewed by 227
Abstract
Soil structure, a critical indicator of soil quality, significantly influences agricultural productivity by impacting on the soil’s capacity to retain and deliver water, nutrients, and salts. Quantitative study of soil structure has always been a challenge because it involves complex spatial-temporal variability. This [...] Read more.
Soil structure, a critical indicator of soil quality, significantly influences agricultural productivity by impacting on the soil’s capacity to retain and deliver water, nutrients, and salts. Quantitative study of soil structure has always been a challenge because it involves complex spatial-temporal variability. This study employs multifractal analysis to assess the temporal variation in soil pore distribution, a pivotal factor in soil structure. Field observation data were collected in a sandy loam area of the People’s Victory Canal Irrigation scheme in Henan Province, China. A 200 m × 200 m test plot with five sampling points was used to collect soil samples at three depth layers (10–30 cm, 30–50 cm, and 50–70 cm) for soil water retention curve and particle size composition analysis, with a total of seven sampling events throughout the growing season. The results revealed that while soil particle-size distribution (Particle-SD) showed minor temporal changes, soil pore-size distribution (Pore-SD) experienced significant temporal fluctuations over a cropping season, both following a generalized power law, indicative of multifractal traits. Multifractal parameters of Pore-SD were significantly correlated with soil bulk density, with the strongest correlation in the topsoil layer (10–30 cm). The dynamic changes in soil pore structure suggest potential variations during saturation–unsaturation cycles, which could be crucial for soil water movement simulations using the Richards equation. The study concludes that incorporating time-varying parameters in simulating soil water transport can enhance the accuracy of predictions. Full article
(This article belongs to the Section Soil and Plant Nutrition)
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<p>The location of the study area and the experimental layout.</p>
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<p>The mean value, variance, and CV of soil particle content in various diameter intervals ((<b>a</b>) refers to the soil layer 1 at 10–30 cm, (<b>b</b>) refers to the soil layer 2 at 30–50 cm and (<b>c</b>) refers to the soil layer 3 at 50–70 cm).</p>
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<p>The mean value, variance, and CV of the generalized fractal dimension spectrum D(q) of the particle composition of various soil samples ((<b>a</b>) refers to the soil layer 1 at 10–30 cm, (<b>b</b>) refers to the soil layer 2 at 30–50 cm and (<b>c</b>) refers to the soil layer 3 at 50–70 cm).</p>
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<p>The mean value, variance, and CV of the multifractal spectrum of the particle composition of various soil samples (error bar represents the standard deviation; (<b>a</b>) refers to the soil layer 1 at 10–30 cm, (<b>b</b>) refers to the soil layer 2 at 30–50 cm and (<b>c</b>) refers to the soil layer 3 at 50–70 cm).</p>
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<p>The bar chart of D1, ΔD, Δα, and Δf for the particle composition of various soil samples (error bar represents the standard deviation; (<b>a</b>) refers to the soil layer 1 at 10–30 cm, (<b>b</b>) refers to the soil layer 2 at 30–50 cm and (<b>c</b>) refers to the soil layer 3 at 50–70 cm).</p>
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<p>Soil pore distribution (average) at various sampling times ((<b>a</b>) refers to the soil layer 1 at 10–30 cm, (<b>b</b>) refers to the soil layer 2 at 30–50 cm and (<b>c</b>) refers to the soil layer 3 at 50–70 cm).</p>
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<p>The generalized fractal dimension spectrum D(q) curves for the soil pore distribution of various soil samples ((<b>a</b>) refers to the soil layer 1 at 10–30 cm, (<b>b</b>) refers to the soil layer 2 at 30–50 cm and (<b>c</b>) refers to the soil layer 3 at 50–70 cm).</p>
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<p>The multifractal spectra f(α) curves of soil pores for various soil samples ((<b>a</b>) refers to the soil layer 1 at 10–30 cm, (<b>b</b>) refers to the soil layer 2 at 30–50 cm and (<b>c</b>) refers to the soil layer 3 at 50–70 cm).</p>
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<p>The bar chart of D1, ΔD, Δα, and Δf for the soil pore distribution of various soil samples (error bar represents the standard deviation; (<b>a</b>) refers to the soil layer 1 at 10–30 cm, (<b>b</b>) refers to the soil layer 2 at 30–50 cm and (<b>c</b>) refers to the soil layer 3 at 50–70 cm).</p>
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17 pages, 1357 KiB  
Article
Trace Element Speciation and Nutrient Distribution in Boerhavia elegans: Evaluation and Toxic Metal Concentration Across Plant Tissues
by Tahreer M. Al-Raddadi, Lateefa A. Al-Khateeb, Mohammad W. Sadaka and Saleh O. Bahaffi
Toxics 2025, 13(1), 14; https://doi.org/10.3390/toxics13010014 - 26 Dec 2024
Viewed by 345
Abstract
This study investigated the elemental composition of Boerhavia elegans, addressing the gap in comprehensive trace element profiling of this medicinal plant. The research aimed to determine the distribution of macronutrients, micronutrients, and beneficial and potentially toxic elements across different plant parts (seeds, [...] Read more.
This study investigated the elemental composition of Boerhavia elegans, addressing the gap in comprehensive trace element profiling of this medicinal plant. The research aimed to determine the distribution of macronutrients, micronutrients, and beneficial and potentially toxic elements across different plant parts (seeds, leaves, stems, and roots). Using ICP-OES analysis, two digestion methods were employed to capture both complex and labile elements. The study revealed distinct elemental distribution patterns, with iron and nickel concentrating in stems, manganese and zinc in leaves, and copper in roots. Magnesium emerged as the most abundant macronutrient, particularly in leaves. Importantly, all detected toxic elements (arsenic, chromium, lead, and cadmium) were below WHO safety limits. These findings provide crucial insights into the nutritional and safety profile of B. elegans, potentially informing its use in traditional medicine and highlighting its potential as a source of essential elements. Full article
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<p>The concentration of cadmium, lead, and arsenic in <span class="html-italic">B. elegans</span> mg/kg.</p>
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<p>The concentration of macronutrient elements mg/kg in <span class="html-italic">B. elegans</span>.</p>
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<p>The concentration of micronutrient elements mg/kg in <span class="html-italic">B. elegans</span>.</p>
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<p>The concentration of the beneficial element mg/kg in <span class="html-italic">B. elegans</span>.</p>
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<p>Biplot of principal component analysis.</p>
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15 pages, 3649 KiB  
Article
Analysis of Soil Microbial Community Structure and Function in Morchella esculenta Habitats in Jilin Province
by Qi Yan, Peng Wang, Zhushan Liu, Ya Yu, Xiao Tan, Xiao Huang, Jiawei Wen and Weidong Zhang
Agronomy 2025, 15(1), 15; https://doi.org/10.3390/agronomy15010015 - 25 Dec 2024
Viewed by 397
Abstract
Morel mushrooms (Morchella spp.), a globally distributed edible and medicinal fungus, possess significant economic and nutritional values. This study investigated rhizosphere soil samples collected from wild Morchella esculenta in three regions of Jilin Province. Metagenome sequencing technology was employed to analyze the [...] Read more.
Morel mushrooms (Morchella spp.), a globally distributed edible and medicinal fungus, possess significant economic and nutritional values. This study investigated rhizosphere soil samples collected from wild Morchella esculenta in three regions of Jilin Province. Metagenome sequencing technology was employed to analyze the structure and function of the rhizosphere microbial communities. The results indicated significant differences in microbial community composition among the samples, with the bacterial community being dominant, followed by the archaeal community. Pseudomonadota and Nitrospirae emerged as the dominant phyla, while Bradyrhizobium and Nitrospira were the co-dominant genera. A correlation analysis of environmental factors revealed that the genera Luteibacter, Streptomyces, Micromonospora, Nocardia, Actinomadura, and Paenibacillus were positively correlated with soil total nitrogen, total phosphorus, and organic matter content. In contrast, Candidatus Nitrosocosmicus showed a significant positive correlation with rapidly available nutrients. The functional annotation analysis of soil microorganisms, based on the KEGG database, revealed that within level A (highest tier), metabolic activities were the most prominent. In contrast, at level B (secondary tier), global and overview maps, carbohydrate metabolism, and amino acid metabolism were dominant. Among the top 10 pathway-level annotations, metabolic pathways, the biosynthesis of secondary metabolites, and microbial metabolism in diverse environments were significant. Environmental factors and KEGG gene network maps indicated that the available potassium, available phosphorus, and pH were closely related to level A genes, which exhibited a higher abundance of metabolism genes. This study was dedicated to deepening the understanding of the structure and function of the rhizosphere microbial community of Morchella esculenta, and providing new perspectives and insights for habitat investigations, the development of biomimetic cultivation techniques, and the domestication of wild strains to Morchella esculenta in Jilin Province. Full article
(This article belongs to the Section Horticultural and Floricultural Crops)
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<p>The geographic distribution map illustrates the collection sites of <span class="html-italic">Morchella esculenta</span>. (The map displays data including latitude, longitude, and altitude for each site).</p>
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<p>The fruiting bodies of <span class="html-italic">Morchella esculenta</span> were collected from the following locations: the southern side of Jingyue Lake in Jingyue District, Changchun City (designated as JYE); the banks of the Yalu River at Shiwudaogou in Changbai County (CBX); and the Baishan State Forest Farm in Jiangyuan District, Baishan City (JY).</p>
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<p>The Venn diagram illustrates the number of soil microbial species in the CBX, JY, and JYE areas. The overlapping areas between the circles represent the common species among the samples; the larger the overlapping area, the higher the species similarity. The non-overlapping areas within the circles depict species that are unique to each respective sample, meaning they belong solely to that sample and are not shared with the others.</p>
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<p>Composition of the soil microbial community of <span class="html-italic">Morchella esculenta,</span> Presented through the relative abundance data of each sample/group in various formats. (<b>a</b>) Kingdom level, (<b>b</b>) phylum level, and (<b>c</b>) genus level. The bar charts are presented in a stacked format, enabling a clear comparison of the abundance of each sample and visualizing the expression of dominant species at each taxonomic level.</p>
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<p>Alpha diversity of soil microorganisms associated with <span class="html-italic">Morchella esculenta</span>. The Chao1 index reflects species richness (<b>a</b>), the Simpson index indicates species evenness (<b>b</b>), and the Shannon index measures species diversity (<b>c</b>). In the graph, “**” indicates significance, “***” indicates extreme significance, and “ns” indicates non-significance.</p>
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<p>PCoA ranks the eigenvalues based on the distance matrix. In the results, different colors are used to represent different groups. The closer the sample distances, the more similar the microbial composition structures between the samples, and the smaller the differences.</p>
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<p>Correlation heat map analysis assesses the degree of association between individual environmental factors and species at the genus level, determining whether the environmental factor has a positive or negative effect on the species. Red indicates a positive correlation, whereas blue indicates a negative correlation. Significance markers, such as asterisks, in the heat map cells are annotated to indicate the significance level of the correlation. (Ph: soil pH; N: total nitrogen content; P: total phosphorus content; K: total potassium content; AP: available phosphorus content; AK: available potassium content; OM: organic matter content). “*”, “**” and “***” represent the levels of significance between the species and the target environmental factors, where “*” indicates a <span class="html-italic">p</span>-value &lt; 0.05, “**” indicates a <span class="html-italic">p</span>-value &lt; 0.01, and “***” indicates a <span class="html-italic">p</span>-value &lt; 0.001.</p>
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<p>The (<b>a</b>) KEGG level A annotations, (<b>b</b>) level B annotations, and (<b>c</b>) pathway-level analyses of rhizosphere soil from <span class="html-italic">Morchella esculenta</span>.</p>
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<p>Correlation network diagram between soil functions and environmental factors in <span class="html-italic">Morchella esculenta</span>. In the network diagram, nodes represent functional genes and environmental factors. Lines indicate correlations, with a greater number of lines signifying stronger correlations. Red signifies positive correlations, whereas blue signifies negative correlations. Larger nodes indicate a higher abundance of the respective genes. The absolute correlation coefficient (ACC) threshold was set at &gt;0.5, and the <span class="html-italic">p</span>-value threshold was set at &lt;0.05. The top 50 correlation pairs were selected for constructing the network diagram. (Ph: soil pH; N: total nitrogen content; P: total phosphorus content; K: total potassium content; AP: available phosphorus content; AK: available potassium content; OM: organic matter content).</p>
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19 pages, 4029 KiB  
Article
Strawberry Plant as a Biomonitor of Trace Metal Air Pollution—A Citizen Science Approach in an Urban-Industrial Area near Lisbon, Portugal
by Carla A. Gamelas, Nuno Canha, Ana R. Justino, Alexandra Nunes, Sandra Nunes, Isabel Dionísio, Zsofia Kertesz and Susana Marta Almeida
Plants 2024, 13(24), 3587; https://doi.org/10.3390/plants13243587 - 23 Dec 2024
Viewed by 563
Abstract
A biomonitoring study of air pollution was developed in an urban-industrial area (Seixal, Portugal) using leaves of strawberry plants (Fragaria × ananassa Duchesne ex Rozier) as biomonitors to identify the main sources and hotspots of air pollution in the study area. The [...] Read more.
A biomonitoring study of air pollution was developed in an urban-industrial area (Seixal, Portugal) using leaves of strawberry plants (Fragaria × ananassa Duchesne ex Rozier) as biomonitors to identify the main sources and hotspots of air pollution in the study area. The distribution of exposed strawberry plants in the area was based on a citizen science approach, where residents were invited to have the plants exposed outside their homes. Samples were collected from a total of 49 different locations, and their chemical composition was analyzed for 22 chemical elements using X-ray Fluorescence spectrometry. Source apportionment tools, such as enrichment factors and principal component analysis (PCA), were used to identify three different sources, one geogenic and two anthropogenic (steel industry and traffic), besides plant major nutrients. The spatial distribution of elemental concentrations allowed the identification of the main pollution hotspots in the study area. The reliability of using strawberry leaves as biomonitors of air pollution was evaluated by comparing them with the performance of transplanted lichens by regression analysis, and a significant relation was found for Fe, Pb, Ti, and Zn, although with a different accumulation degree for the two biomonitors. Furthermore, by applying PCA to the lichen results, the same pollution sources were identified. Full article
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Graphical abstract

Graphical abstract
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<p>Location of the study area: (<b>left</b>) at a national level; (<b>middle</b>) spatial distribution of the strawberry plants that could be retrieved after the exposure period (green dots) and the reference background site (red dot); (<b>right</b>) location of industries A, B, C, and D.</p>
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<p>Modified coefficient of variation (standard deviation divided by the median) of element concentrations in strawberry leaves.</p>
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<p>Accumulation Factor (AF) of the elements in exposed strawberry leaves. In the box plot, the square represents the mean, upper and lower times sign (×) represent the maximum and minimum values, and the whiskers extend to 1.5* the interquartile range. Below green line—no accumulation; green to orange line—minimal accumulation; orange to red line—moderate accumulation; above red line—significant accumulation.</p>
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<p>Enrichment factor (EF) of the elements in exposed strawberry leaves. Above the red line, anthropogenic sources are present.</p>
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<p>Spatial distribution of element concentrations in the exposed strawberry leaves in the study area (in mg·kg<sup>−1</sup>) related to (<b>above</b>) crustal natural origin, (<b>middle</b>) industry/steelworks, and (<b>below</b>) traffic.</p>
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<p>Mean elemental concentrations found in the exposed strawberry leaves versus the distance to steelworks B.</p>
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30 pages, 2332 KiB  
Review
Cold-Adapted Fungi: Goldmine of Biomolecules Applicable in Industry
by Iga Jodłowska and Aneta Monika Białkowska
Appl. Sci. 2024, 14(24), 11950; https://doi.org/10.3390/app142411950 - 20 Dec 2024
Viewed by 423
Abstract
Fungi, which are widely distributed across the Earth, have successfully managed to colonize cold environments (e.g., polar regions, alpine ecosystems, and glaciers) despite the challenging conditions for life. They are capable of living in extremely harsh environments due to their ecological versatility and [...] Read more.
Fungi, which are widely distributed across the Earth, have successfully managed to colonize cold environments (e.g., polar regions, alpine ecosystems, and glaciers) despite the challenging conditions for life. They are capable of living in extremely harsh environments due to their ecological versatility and morphological plasticity. It is also believed that lower eukaryotes are the most adapted to life at low temperatures among microorganisms that thrive in cold environments. They play important ecological roles, contributing to nutrient recycling and organic matter mineralization. These highly specialized microorganisms have developed adaptation strategies to overcome the direct and indirect harmful influences of low temperatures. They have evolved a wide range of complex and cooperative adaptations at various cellular levels, including modifications to the cell envelope and enzymes, the production of cryoprotectants and chaperones, and the development of new metabolic functions. Adaptation to cold environments has made fungi an exciting source for the discovery of new cold-adapted enzymes (e.g., proteinases, lipases) and secondary metabolites (e.g., pigments, osmolytes, polyunsaturated fatty acids) for widespread use in biotechnology, food technology, agriculture, pharmaceutics, molecular biology, textile industry, and environmental bioremediation in cold climates. This review aims to provide a comprehensive overview of the adaptive strategies employed by psychrophilic yeasts and fungi, highlighting their ecological roles and biotechnological potential. Understanding these adaptive mechanisms not only sheds light on microbial life in extreme environments but also paves the way for innovative applications in the food industry and agriculture. Full article
(This article belongs to the Special Issue Role of Microbes in Agriculture and Food, 2nd Edition)
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<p>Physiological adaptation of psychrophilic and psychrotrophic fungi.</p>
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<p>Basic features of enzymes from psychrophilic microorganisms.</p>
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<p>Cold-active enzymes and their biotechnological application in the food and feed industry.</p>
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<p>Potential application of IBPs proteins in food and agriculture.</p>
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<p>Potential application of low-temperature biosurfactants in food industry and agriculture.</p>
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