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17 pages, 7466 KiB  
Article
Long-Term Assessment of Soil Salinization Patterns in the Yellow River Delta Using Landsat Imagery from 2003 to 2021
by Yu Fu, Pengyu Wang, Wengeng Cao, Shiqian Fu, Juanjuan Zhang, Xiangzhi Li, Jiju Guo, Zhiquan Huang and Xidong Chen
Land 2025, 14(1), 24; https://doi.org/10.3390/land14010024 (registering DOI) - 26 Dec 2024
Abstract
The Yellow River Delta (YRD), as a key area for the economic development of the Bohai Rim region, significantly impacts soil fertility and plant growth through soil salinization content. Accurately determining the spatial distribution of soil salinization in the YRD is vital for [...] Read more.
The Yellow River Delta (YRD), as a key area for the economic development of the Bohai Rim region, significantly impacts soil fertility and plant growth through soil salinization content. Accurately determining the spatial distribution of soil salinization in the YRD is vital for regional salinity management and agricultural development. In this study, we constructed and evaluated three soil salinization indices—NDSI, SI, and S5—using measured soil conductivity data and three machine learning methods: Random Forest, Support Vector Machine, and XGBoost. The results indicate that the Support Vector Machine achieved the best inversion effect on regional salinization levels, with an Area Under Curve (AUC) value of 0.88. The salinization level in the YRD has shown an increasing trend over the years, decreasing spatially from north to south, from east to west, and from the coast inland. From 2003 to 2009, salinization was primarily concentrated in northern and eastern coastal areas, while from 2009 to 2021, it gradually expanded inland. The salinized area increased from 538.4 km2 in 2003 to 761.5 km2 in 2021, particularly between 2009 and 2015, with a 47.95% increase. The main factors influencing salinization in the YRD were distance from the Bohai Sea, seasonal average potential evapotranspiration, and seasonal average normalized vegetation index, with interaction-driven effects being stronger than single-factor effects. This study provides crucial scientific support for sustainable salinization management and ecological restoration in the Bohai Sea region. Full article
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<p>Geographic location of the study area and distribution of sampling points.</p>
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<p>Quantitative classification map of salinity at sampling sites.</p>
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<p>Salinity inversion distribution.</p>
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<p>Change in area by category in YRD between 2003–2021. (The red dotted line is the building area).</p>
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<p>Changes in area of the Region 1 and Region 2 land categories.</p>
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<p>Geodetic survey results by year.</p>
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23 pages, 292 KiB  
Article
Environmental Degradation in Gulf Cooperation Council: Role of ICT Development, Trade, FDI, and Energy Use
by Samira Youssef Brahmia and Sonia Mannai
Sustainability 2025, 17(1), 54; https://doi.org/10.3390/su17010054 - 25 Dec 2024
Abstract
Environmental degradation is a pressing issue, particularly in resource-dependent regions like the Gulf Cooperation Council (GCC) countries. While significant research has explored the environmental impacts of economic growth and resource use globally, limited attention has been given to the unique dynamics in the [...] Read more.
Environmental degradation is a pressing issue, particularly in resource-dependent regions like the Gulf Cooperation Council (GCC) countries. While significant research has explored the environmental impacts of economic growth and resource use globally, limited attention has been given to the unique dynamics in the GCC, including the role of ICT development, trade openness, and FDI inflows. This research examines how information and communication technology (ICT) development, economic growth, trade openness, foreign direct investment (FDI) inflows, and electricity consumption influenced environmental degradation in GCC countries from 1990 to 2022. Using panel data analysis, the study finds that ICT expansion and increased electricity consumption significantly contribute to higher CO2 emissions, exacerbating environmental degradation. Economic growth follows the Environmental Kuznets Curve (EKC) pattern, where environmental harm initially increases with growth but can decline as economies diversify and adopt cleaner technologies. Trade openness and FDI inflows, particularly in resource-intensive industries, also contribute to environmental degradation, supporting the pollution haven hypothesis. However, these factors present opportunities for sustainable development if paired with stricter environmental regulations and cleaner technology adoption. The study highlights the need for GCC policymakers to prioritize renewable energy investments, enforce stronger environmental policies, and promote energy efficiency to balance economic growth with environmental sustainability. Recommendations for future research include exploring other environmental factors and assessing the role of technological innovations in reducing emissions. Full article
(This article belongs to the Special Issue Advances in Economic Development and Business Management)
18 pages, 2327 KiB  
Article
Assessment of 3-Cyanobenzoic Acid as a Possible Herbicide Candidate: Effects on Maize Growth and Photosynthesis
by Luiz Henryque Escher Grizza, Isabela de Carvalho Contesoto, Ana Paula da Silva Mendonça, Amanda Castro Comar, Ana Paula Boromelo, Ana Paula Ferro, Rodrigo Polimeni Constantin, Wanderley Dantas dos Santos, Rogério Marchiosi and Osvaldo Ferrarese-Filho
Plants 2025, 14(1), 1; https://doi.org/10.3390/plants14010001 - 24 Dec 2024
Abstract
Chemical weed control is a significant agricultural concern, and reliance on a limited range of herbicide action modes has increased resistant weed species, many of which use C4 metabolism. As a result, the identification of novel herbicidal agents with low toxicity targeting C4 [...] Read more.
Chemical weed control is a significant agricultural concern, and reliance on a limited range of herbicide action modes has increased resistant weed species, many of which use C4 metabolism. As a result, the identification of novel herbicidal agents with low toxicity targeting C4 plants becomes imperative. An assessment was conducted on the impact of 3-cyanobenzoic acid on the growth and photosynthetic processes of maize (Zea mays), a representative C4 plant, cultivated hydroponically over 14 days. The results showed a significant reduction in plant growth and notable disruptions in gas exchange and chlorophyll a fluorescence due to the application of 3-cyanobenzoic acid, indicating compromised photosynthetic activity. Parameters such as the chlorophyll index, net assimilation (A), stomatal conductance (gs), intercellular CO2 concentration (Ci), maximum effective photochemical efficiency (Fv′/Fm′), photochemical quenching coefficient (qP), quantum yield of photosystem II photochemistry (ϕPSII), and electron transport rate through PSII (ETR) all decreased. The A/PAR curve revealed reductions in the maximum net assimilation rate (Amax) and apparent quantum yield (ϕ), alongside an increased light compensation point (LCP). Moreover, 3-cyanobenzoic acid significantly decreased the carboxylation rates of RuBisCo (Vcmax) and PEPCase (Vpmax), electron transport rate (J), and mesophilic conductance (gm). Overall, 3-cyanobenzoic acid induced substantial changes in plant growth, carboxylative processes, and photochemical activities. The treated plants also exhibited heightened susceptibility to intense light conditions, indicating a significant and potentially adverse impact on their physiological functions. These findings suggest that 3-cyanobenzoic acid or its analogs could be promising for future research targeting photosynthesis. Full article
(This article belongs to the Special Issue Plant Chemical Ecology)
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<p>Hydroponically grown maize plants treated with 3-cyanobenzoic acid for 14 days: 0 mM (<b>A</b>), 0.5 mM (<b>B</b>), and 1.0 mM (<b>C</b>). Scale bars represent 10 cm.</p>
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<p>Effects of 3-cyanobenzoic acid on hydroponically grown maize plants for 14 days. Parameters measured include (<b>A</b>) chlorophyll content (SPAD index), (<b>B</b>) maximum quantum efficiency of PSII photochemistry (F<sub>v</sub>/F<sub>m</sub>), (<b>C</b>) net assimilation (<span class="html-italic">A</span>), (<b>D</b>) stomatal conductance (<span class="html-italic">g</span><sub>s</sub>), (<b>E</b>) intercellular CO<sub>2</sub> concentration (<span class="html-italic">C</span><sub>i</sub>), (<b>F</b>) maximum efficiency of PSII (F<sub>v′</sub>/F<sub>m′</sub>), (<b>G</b>) non-photochemical quenching (NPQ), and (<b>H</b>) photochemical quenching (q<sub>P</sub>). Means values (n = 16–22 ± SEM) significantly different from the control are marked with * <span class="html-italic">p</span> ≤ 0.05, ** <span class="html-italic">p</span> ≤ 0.01, according to Dunnett’s test.</p>
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<p>Effects of 3-cyanobenzoic acid on hydroponically grown maize plants for 14 days on quantum yield of photosystem II photochemistry (ϕ<sub>PSII</sub>) (<b>A</b>) and electron transport rate through PSII (ETR) (<b>B</b>). Means (n = 22 ± SEM) marked with * or ** are statistically different from the control according to Dunnett’s test at 5% and 1% significance levels, respectively.</p>
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<p>Average net assimilation (<span class="html-italic">A</span>) curves in response to varying photosynthetically active radiation (PAR) for maize plants grown hydroponically with 3-cyanobenzoic acid for 14 days. The initial linear region of the graph is magnified for clarity. Data are presented as mean values (n = 4).</p>
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<p>Effects of 3-cyanobenzoic acid on hydroponically grown maize plants after 14 days, focusing on parameters derived from the <span class="html-italic">A</span>/PAR curve: (<b>A</b>) net assimilation (<span class="html-italic">A</span><sub>max</sub>), (<b>B</b>) apparent quantum yield (ϕ), (<b>C</b>) light compensation point (LCP), and (<b>D</b>) dark respiration rate (<span class="html-italic">R</span><sub>D)</sub>. Means values (n = 3–4 ± SEM) significantly different from the control are marked with, ** <span class="html-italic">p</span> ≤ 0.01, according to Dunnett’s test.</p>
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<p>Average net assimilation (<span class="html-italic">A</span>) curves in response to varying intercellular CO<sub>2</sub> concentration (<span class="html-italic">C</span><sub>i</sub>) forma maize plants grown hydroponically with 3-cyanobenzoic acid for 14 days. Data are presented as mean values (n = 4–6).</p>
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<p>Effects of 3-cyanobenzoic acid on maize plants grown hydroponically for 14 days, focusing on parameters derived from the <span class="html-italic">A</span>/<span class="html-italic">C</span><sub>i</sub> curve: (<b>A</b>) maximum carboxylation rate of RuBisCo (V<sub>cmax</sub>), (<b>B</b>) maximum carboxylation rate of PEPCase (V<sub>pmax</sub>), (<b>C</b>) rate of photosynthetic electron transport (<span class="html-italic">J</span>), and (<b>D</b>) mesophyll conductance (<span class="html-italic">g</span><sub>m</sub>). Means values (n = 4–6 ± SEM) significantly different from the control are marked with * <span class="html-italic">p</span> ≤ 0.05, ** <span class="html-italic">p</span> ≤ 0.01, according to Dunnett’s test.</p>
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<p>Chlorophyll <span class="html-italic">a</span> fluorescence OJIP transient curves in maize plants grown hydroponically with 3-cyanobenzoic acid for 14 days. The OJIP curve represents key fluorescence intensities: the minimal fluorescence when all PSII reaction centers are open (O step), the intensity at 0.002 s (J step), the intensity at 0.03 s (I step), and the maximal fluorescence when all PSII reaction centers are closed (P step, at 0.3 s). Data are presented as means (n = 18 ± SEM).</p>
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<p>Effects of 3-cyanobenzoic acid on specific energy flux parameters in hydroponically grown maize plants after 14 days of treatment. Parameters include: absorption flux per reaction center (ABS/RC), energy trapping per reaction center (TR<sub>0</sub>/RC), electron transport per reaction center (ET<sub>0</sub>/RC), energy dissipation per reaction center (DI<sub>0</sub>/RC), reaction center density per cross-sectional area (RC/CS), quantum yield of primary PSII photochemistry (TR<sub>0</sub>/ABS), efficiency with which a trapped electron is transferred from Q<sub>A</sub> to Q<sub>B</sub> (ET<sub>0</sub>/TR<sub>0</sub>), quantum yield of electron transport from Q<sub>A</sub> to Q<sub>B</sub> (ET<sub>0</sub>/ABS), and performance indices (PI<sub>ABS</sub> and PI<sub>Total</sub>). Data are presented as means (n = 18 ± SEM). Mean value significantly different from the control is marked with * <span class="html-italic">p</span> ≤ 0.05, according to Dunnett’s test.</p>
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18 pages, 4672 KiB  
Article
Impact of Temperature on the Hygroscopic Behavior and Mechanical Properties of Expansive Mudstone
by Lingdong Meng, Wenxiu Zhang, Huakui Yang, Shaoyun Xu, Ming Xu, Lina Zhang and Wenlong Dong
Energies 2024, 17(24), 6491; https://doi.org/10.3390/en17246491 - 23 Dec 2024
Abstract
Aiming at the large-scale nonlinear deformation of the roadway in Liangjia Coal Mine, Shandong Province, the mudstone of the 1602 working face is taken as the research object. A high-precision mudstone weathering test system integrating monitoring and control was developed, and the weathering [...] Read more.
Aiming at the large-scale nonlinear deformation of the roadway in Liangjia Coal Mine, Shandong Province, the mudstone of the 1602 working face is taken as the research object. A high-precision mudstone weathering test system integrating monitoring and control was developed, and the weathering tests of expanded mudstone were carried out at 10 °C, 20 °C, 30 °C and 40 °C. The results show that the hygroscopic curves of expanded mudstone demonstrate a nonlinear growth trend at different temperatures, and the influence of temperature on the hygroscopic curves is less than 20%. From the overall law, it can be roughly divided into three stages: the strong hygroscopic stage, the hygroscopic deceleration stage and the stable hygroscopic stage. The maximum expansion rates of the samples were 4.1%, 5.3%, 6.2% and 6.8%, respectively, and the water content and expansion rates corresponding to different ambient temperature and humidity were generally “concave”. The mechanical tests show that the mechanical properties of mudstone decrease as the ambient temperature increases, and the corresponding compressive strength decreases by 16~50%. The linear degradation is obvious, and the gradual expansion of peak strain indicates that the plasticity of the rock increases and the elastic modulus decreases linearly. Full article
(This article belongs to the Section H: Geo-Energy)
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<p>Original rock and prepared mudstone samples. (<b>a</b>) Original rock from Liangjia Coal Mine; (<b>b</b>) prepared mudstone samples.</p>
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<p>Qualitative and quantitative analysis of mineral components of mudstone. (<b>a</b>) XRD diffraction pattern of expansive mudstone sample; (<b>b</b>) results of qualitative and quantitative analysis of whole rock minerals.</p>
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<p>Particle size distribution curve of expansive mudstone.</p>
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<p>Structural diagram of the expansive mudstone weathering test system. (<b>a</b>) Schematic design; (<b>b</b>) physical test system.</p>
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<p>Variation curve of water content with time under different temperature conditions. (<b>a</b>) Curve of moisture content with time; (<b>b</b>) acceleration of water absorption by mudstone.</p>
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<p>Discrete values of expansive mudstone water absorption. (<b>a</b>) Discreteness in different stages; (<b>b</b>) influence of temperature on discreteness.</p>
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<p>Effect of temperature on moisture absorption of expansive mudstone.</p>
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<p>Relationship between expansion strain and time under different ambient temperatures. (<b>a</b>) Time history curve; (<b>b</b>) growth strain of expansion rate.</p>
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<p>Time history curve fitting of the expansion rate at different ambient temperatures. (<b>a</b>) T = 10 °C; (<b>b</b>) T = 20 °C; (<b>c</b>) T = 30 °C; (<b>d</b>) T = 40 °C.</p>
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<p>Hygroscopic total stress–strain curve of rock under different temperatures.</p>
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<p>Evolution law of mechanical parameters of weathering samples. (<b>a</b>) Uniaxial compressive strength; (<b>b</b>) strain; (<b>c</b>) modulus of elasticity.</p>
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<p>Law of expansion pressure and moisture content under different temperatures.</p>
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22 pages, 1271 KiB  
Article
An Autoregressive Distributed Lag and Environmental Kuznets Curve Approach: Linking CO2 Emissions and Electricity Access in India
by Ionuț Nica, Irina Georgescu and Jani Kinnunen
Sustainability 2024, 16(24), 11278; https://doi.org/10.3390/su162411278 - 23 Dec 2024
Abstract
This study evaluates the impact of foreign direct investment (FDI), per capita GDP, renewable energy consumption, and urbanization on India’s CO2 emissions over the period 1990–2023. In the context of rapid economic growth and urbanization, India faces major challenges related to [...] Read more.
This study evaluates the impact of foreign direct investment (FDI), per capita GDP, renewable energy consumption, and urbanization on India’s CO2 emissions over the period 1990–2023. In the context of rapid economic growth and urbanization, India faces major challenges related to environmental sustainability. Using the ARDL (Autoregressive Distributed Lag) model and the Environmental Kuznets Curve (EKC), this research analyzes the complex relationships between these factors and CO2 emissions. The results highlight the existence of an N-shaped EKC curve with two inflection points at GDP values. This study highlights the essential role of renewable energy consumption in reducing emissions and improving access to electricity in promoting sustainable development. The findings provide valuable insights into economic and energy policies, highlighting the need to balance economic growth with environmental protection. Full article
(This article belongs to the Special Issue Sustainable Energy: The Path to a Low-Carbon Economy)
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<p>The evolution of <math display="inline"><semantics> <mrow> <mi>C</mi> <msub> <mrow> <mi>O</mi> </mrow> <mrow> <mn>2</mn> </mrow> </msub> </mrow> </semantics></math>, GDP, RENC, ACEL, and FDI in India (1990–2023).</p>
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<p>Cubic EKC for India.</p>
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<p>Plot of CUSUMSQ for coefficients’ stability of ARDL model at 5% level of significance.</p>
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16 pages, 5182 KiB  
Article
Analysis of Growth Models in Galician × Nelore Crossbred Cattle in the First Year of Life
by Antonio Iglesias, Fernando Mata, Joaquim Lima Cerqueira, Alicja Kowalczyk, Jesús Cantalapiedra, José Ferreiro and José Araújo
Animals 2024, 14(24), 3698; https://doi.org/10.3390/ani14243698 - 21 Dec 2024
Viewed by 332
Abstract
The veal niche market is gaining momentum in Brazil. Locally known as ‘Vitelão’, veal refers to the meat from calves slaughtered up to 12 months of age. In this study, we assessed the Galician Blond × Nelore cross as a candidate to produce [...] Read more.
The veal niche market is gaining momentum in Brazil. Locally known as ‘Vitelão’, veal refers to the meat from calves slaughtered up to 12 months of age. In this study, we assessed the Galician Blond × Nelore cross as a candidate to produce veal. The aim of this study was to establish criteria for selecting 12-month-old calves suitable for slaughter. To find the best fit, we adjusted various growth models for calves up to 12 months of age. Once the best fit was determined, the selected growth model was then used to calculate the relative and instantaneous growth rates to evaluate the slaughtering potential at 12 months. Our study reveals that, under present conditions, the Logistic model is the best fit for characterizing and functionally analyzing growth from birth to 12 months of age in Galician Blond crosses with Nelore. Calves resulting from this cross experience rapid growth in their first 12 months of life, making them an excellent choice for producing high-quality veal while maintaining rusticity and adaptability to extreme environments. The results of this study could contribute to enhancing the growth management systems of Galician Blond and Nelore crosses in Brazilian grazing production systems. Additionally, they can be incorporated into genetic improvement programs as a tool for selecting animals with greater precocious growth without altering adult weight. Full article
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<p>Growth curves for intact male and female crosses between Galician Blond and Nelore. Growth projection after 12 months and up to 18 months is represented in lighter colors.</p>
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<p>Growth velocity or relative growth rate over time for Galician Blond × Nelore crosses. The projection of growth after 12 months of age and up to 18 months is represented in lighter colors.</p>
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<p>Growth acceleration or instantaneous growth rate over time for Galician Blond × Nelore crosses. The projection of growth after 12 months of age and up to 18 months is represented in lighter colors.</p>
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<p>Brody model for males. (<b>A</b>) Ordered residual plot, (<b>B</b>) residuals versus predicted value plot, (<b>C</b>) standardized residual Q-Q plot.</p>
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<p>Logistic model for males. (<b>A</b>) Ordered residual plot, (<b>B</b>) residuals versus predicted value plot, (<b>C</b>) standardized residual Q-Q plot.</p>
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<p>Gompertz model for males. (<b>A</b>) Ordered residual plot, (<b>B</b>) residuals versus predicted value plot, (<b>C</b>) standardized residual Q-Q plot.</p>
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<p>Von Bertalanffy 2/3 model for males. (<b>A</b>) Ordered residual plot, (<b>B</b>) residuals versus predicted value plot, (<b>C</b>) standardized residual Q-Q plot.</p>
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<p>Brody + constant model for males. (<b>A</b>) Ordered residual plot, (<b>B</b>) residuals versus predicted value plot, (<b>C</b>) standardized residual Q-Q plot.</p>
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<p>Logistic + constant model for males. (<b>A</b>) Ordered residual plot, (<b>B</b>) residuals versus predicted value plot, (<b>C</b>) standardized residual Q-Q plot.</p>
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<p>Gompertz + constant model for males. (<b>A</b>) Ordered residual plot, (<b>B</b>) residuals versus predicted value plot, (<b>C</b>) standardized residual Q-Q plot.</p>
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<p>Bertalanffy 2/3 + constant model for males. (<b>A</b>) Ordered residual plot, (<b>B</b>) residuals versus predicted value plot, (<b>C</b>) standardized residual Q-Q plot.</p>
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<p>Brody model for females. (<b>A</b>) Ordered residual plot, (<b>B</b>) residuals versus predicted value plot, (<b>C</b>) standardized residual Q-Q plot.</p>
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<p>Logistic model for females. (<b>A</b>) Ordered residual plot, (<b>B</b>) residuals versus predicted value plot, (<b>C</b>) standardized residual Q-Q plot.</p>
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<p>Gompertz model for females. (<b>A</b>) Ordered residual plot, (<b>B</b>) residuals versus predicted value plot, (<b>C</b>) standardized residual Q-Q plot.</p>
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<p>Brody + constant model for females. (<b>A</b>) Ordered residual plot, (<b>B</b>) residuals versus predicted value plot, (<b>C</b>) standardized residual Q-Q plot.</p>
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<p>Gompertz + constant model for females. (<b>A</b>) Ordered residual plot, (<b>B</b>) residuals versus predicted value plot, (<b>C</b>) standardized residual Q-Q plot.</p>
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<p>Bertalanffy + constant model for females. (A) Ordered residual plot, (<b>B</b>) residuals versus predicted value plot, (<b>C</b>) standardized residual Q-Q plot.</p>
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14 pages, 231 KiB  
Article
Dynamic Modeling for Prediction of Amino Acid Requirements in Broiler Diets
by Guangju Wang, Xin Zhao, Mengjie Xu, Zhenwu Huang, Jinghai Feng and Minhong Zhang
Agriculture 2024, 14(12), 2354; https://doi.org/10.3390/agriculture14122354 - 21 Dec 2024
Viewed by 205
Abstract
Accurate prediction of amino acid requirements in fast-growing broilers is crucial for cost-effective diet formulation and reducing nitrogen excretion to mitigate environmental impact. This study developed a dynamic model to predict standardized ileal digestible amino acid requirements throughout broiler growth using a factorial [...] Read more.
Accurate prediction of amino acid requirements in fast-growing broilers is crucial for cost-effective diet formulation and reducing nitrogen excretion to mitigate environmental impact. This study developed a dynamic model to predict standardized ileal digestible amino acid requirements throughout broiler growth using a factorial approach and the comparative slaughter technique, considering maintenance, growth, and gender factors. The model was based on an experiment were designed using 480 15-day-old Arbor Acres chickens randomly assigned to 10 groups. A linear equation was derived using established growth and protein deposition curves to calculate maintenance and growth coefficients. Models for five essential amino acids under different amino-acid-to-protein ratios were created (R2 > 0.70). The model effectively estimated daily amino acid needs and specific time intervals. Comparisons with NRC (1994), BTPS (2011), and Arbor Acres manual (2018) showed higher predicted requirements for lysine, methionine, valine, and threonine than Arbor Acres (2018) and BTPS (2011), significantly exceeding NRC (1994). Arginine predictions aligned with BTPS in early stages, but were slightly lower in later stages. This supports the further development of dynamic amino acid models. Full article
(This article belongs to the Special Issue Assessment of Nutritional Value of Animal Feed Resources)
12 pages, 3618 KiB  
Article
Synergistic Effects and Mechanisms of Action of Rutin with Conventional Antibiotics Against Escherichia coli
by Lankun Yi, Yubin Bai, Xu Chen, Weiwei Wang, Chao Zhang, Zixuan Shang, Zhijin Zhang, Jiajing Li, Mingze Cao, Zhen Zhu and Jiyu Zhang
Int. J. Mol. Sci. 2024, 25(24), 13684; https://doi.org/10.3390/ijms252413684 - 21 Dec 2024
Viewed by 273
Abstract
Rutin is a widely known plant secondary metabolite that exhibits multiple physiological functions. The present study focused on screening for synergistic antibacterial combinations containing rutin, and further explored the mechanisms behind this synergy. In vitro antibacterial test results of rutin showed that the [...] Read more.
Rutin is a widely known plant secondary metabolite that exhibits multiple physiological functions. The present study focused on screening for synergistic antibacterial combinations containing rutin, and further explored the mechanisms behind this synergy. In vitro antibacterial test results of rutin showed that the ranges of minimum inhibitory concentration (MIC) and Minimum bactericidal concentration (MBC) are 0.125–1 and 0.125–2 mg/mL, respectively. However, rutin and amikacin have a significant synergistic effect, with a fractional inhibitory concentration index (FICI) range of 0.1875–0.5. The time bactericidal curve proved that the combination of rutin and amikacin inhibited bacterial growth within 8 h. Scanning electron microscopy (SEM) revealed that a low-dose combination treatment could disrupt the cell membrane of Escherichia coli (E. coli). A comprehensive analysis using alkaline phosphatase (AKP), K+, and a protein leakage assay revealed that co-treatment destroyed the cell membrane of E. coli, resulting in the significant leakage of AKP, intracellular K+, and proteins. Moreover, confocal laser scanning microscopy (CLSM) and red–green cell ratio analysis indicated severe damage to the E. coli cell membrane following the co-treatment of rutin and amikacin. This study indicates the remarkable potential of strategically selecting antibacterial agents with maximum synergistic effect, which could significantly control antibiotic resistance. Full article
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<p>Time–kill curves of rutin and amikacin combined against <span class="html-italic">Escherichia coli</span>. (<b>A</b>): <span class="html-italic">Escherichia coli</span> ATCC 25922; (<b>B</b>): <span class="html-italic">Escherichia coli</span> T31.</p>
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<p>Scanning Electron Microscopy observation of <span class="html-italic">Escherichia coli</span> morphology (10,000×). (<b>A</b>): <span class="html-italic">Escherichia coli</span> ATCC 25922; (<b>B</b>): Amikacin-treated <span class="html-italic">Escherichia coli</span> ATCC 25922; (<b>C</b>): Rutin-treated <span class="html-italic">Escherichia coli</span> ATCC 25922; (<b>D</b>): Rutin and Amikacin-treated <span class="html-italic">Escherichia coli</span> ATCC 25922; (<b>E</b>): <span class="html-italic">Escherichia coli</span> T31; (<b>F</b>): Amikacin-treated <span class="html-italic">Escherichia coli</span> T31; (<b>G</b>): Rutin-treated <span class="html-italic">Escherichia coli</span> T31; (<b>H</b>): Rutin and Amikacin-treated <span class="html-italic">Escherichia coli</span> T31. The red parts are the representative change of the pictures.</p>
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<p>Effect of rutin and amikacin alone or combined on <span class="html-italic">Escherichia coli</span> Alkaline Phosphatase leakage. (<b>A</b>): <span class="html-italic">Escherichia coli</span> ATCC 25922; (<b>B</b>): <span class="html-italic">Escherichia coli</span> T31. Each value is presented as the mean ± SD (<span class="html-italic">n</span> = 3). ns <span class="html-italic">p</span>-value &gt; 0.05, *** <span class="html-italic">p</span>-value &lt; 0.001, **** <span class="html-italic">p</span>-value &lt; 0.0001.</p>
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<p>Effect of rutin and amikacin alone or combined on <span class="html-italic">Escherichia coli</span> K<sup>+</sup> leakage. (<b>A</b>): <span class="html-italic">Escherichia coli</span> ATCC 25922; (<b>B</b>): <span class="html-italic">Escherichia coli</span> T31. Each value is presented as the mean ± SD (<span class="html-italic">n</span> = 3). ns <span class="html-italic">p</span>-value &gt; 0.05, *** <span class="html-italic">p</span>-value &lt; 0.001, **** <span class="html-italic">p</span>-value &lt; 0.0001.</p>
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<p>Effect of rutin and amikacin alone or combined on <span class="html-italic">Escherichia coli</span> protein leakage. (<b>A</b>): <span class="html-italic">Escherichia coli</span> ATCC 25922; (<b>B</b>): <span class="html-italic">Escherichia coli</span> T31. Each value is presented as the mean ± SD (<span class="html-italic">n</span> = 3). * <span class="html-italic">p</span>-value &lt; 0.05, *** <span class="html-italic">p</span>-value &lt; 0.001, **** <span class="html-italic">p</span>-value &lt; 0.0001.</p>
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<p>Confocal Laser Scanning Microscopy observes changes in <span class="html-italic">Escherichia coli</span> cell membrane integrity. (<b>A</b>): <span class="html-italic">Escherichia coli</span> ATCC 25922; (<b>B</b>): amikacin-treated <span class="html-italic">Escherichia coli</span> ATCC 25922; (<b>C</b>): rutin-treated <span class="html-italic">Escherichia coli</span> ATCC 25922; (<b>D</b>): rutin and amikacin-treated <span class="html-italic">Escherichia coli</span> ATCC 25922; (<b>E</b>): <span class="html-italic">Escherichia coli</span> T31; (<b>F</b>): amikacin-treated <span class="html-italic">Escherichia coli</span> T31; (<b>G</b>): rutin-treated <span class="html-italic">Escherichia coli</span> T31; and (<b>H</b>): rutin and amikacin-treated <span class="html-italic">Escherichia coli</span> T31. Scale Bar: 50 µm.</p>
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<p>Analysis of the red–green ratio of bacteria in Confocal Laser Scanning Microscopy results. (<b>A</b>): <span class="html-italic">Escherichia coli</span> ATCC 25922; (<b>B</b>): <span class="html-italic">Escherichia coli</span> T31. Each value is presented as the mean ± SD (<span class="html-italic">n</span> = 3). ns <span class="html-italic">p</span>-value &gt; 0.05, * <span class="html-italic">p</span>-value &lt; 0.05, **** <span class="html-italic">p</span>-value &lt; 0.0001.</p>
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<p>Diagram of the mechanism of action of rutin and amikacin combined against <span class="html-italic">Escherichia coli.</span> When rutin is combined with amikacin, it destroys the cell wall and cell membrane of <span class="html-italic">E. coli</span>, allowing a large amount of the drug to enter the bacteria. Amikacin inhibits ribosomes from synthesizing proteins. At the same time, AKP, intracellular K<sup>+</sup>, and proteins are leaked in large quantities, eventually causing the bacteria to lose their vitality.</p>
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14 pages, 1807 KiB  
Article
Effect of Genetic Polymorphism of Bovine β-Casein Variants (A1 and A2) on Yoghurt Characteristics
by Bibiana Juan Godoy, Idoia Codina-Torrella and Antonio-José Trujillo Mesa
Foods 2024, 13(24), 4135; https://doi.org/10.3390/foods13244135 - 20 Dec 2024
Viewed by 189
Abstract
The present study aims to evaluate the physicochemical and sensory characteristics of A2 yoghurts (made with A2A2 β-CN milk), in comparison with Control yoghurts (elaborated from conventional milk, a mixture of A1 and A2 β-CN milk). The pH, acidity, water-holding capacity, spontaneous syneresis, [...] Read more.
The present study aims to evaluate the physicochemical and sensory characteristics of A2 yoghurts (made with A2A2 β-CN milk), in comparison with Control yoghurts (elaborated from conventional milk, a mixture of A1 and A2 β-CN milk). The pH, acidity, water-holding capacity, spontaneous syneresis, firmness and color of yoghurts were monitored during their cold storage (4 °C) for 35 days. Two independent sensory tests (with expert judges and consumers) were also performed. The A2 yoghurts showed only minor differences in some of their physicochemical and sensory characteristics compared to those made with conventional milk. At specific storage times, the A2 yoghurt exhibited higher levels of acidity, luminosity (L*) and firmness, compared to the Control. No differences were observed in the growth curves of the starter (Lactobacillus delbrueckii subsp. bulgaricus and Streptococcus salivarius subsp. thermophilus) during the yoghurt production, nor in the water-holding capacity or spontaneous syneresis of the two types of gels. Regarding the sensory evaluation of samples, the A2 yoghurts were described as firmer and more adherent (by the expert panel), and brighter and more homogeneous (by the consumers) than the Control. In all cases, both consumers and expert sensory panels showed a preference for the A2 yoghurts. Therefore, these results demonstrate the suitability of A2A2 β-CN milk for producing yoghurts with similar characteristics to those obtained with conventional milk. Full article
(This article belongs to the Section Dairy)
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Graphical abstract

Graphical abstract
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<p>Microbiological counts of starters (<b>a</b>) <span class="html-italic">S. thermophilus</span> and (<b>b</b>) <span class="html-italic">L. bulgaricus</span> of Control and A2 yoghurts during their storage. Control (<span style="color:#A4A4A4">●</span>): Control, yoghurt made with milk from cows with A1A2 and A1A1 β-CN genotypes; A2 (●): yoghurt made with milk from cows with A2A2 β-CN genotype.</p>
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<p>Evolution of color coordinates of yoghurt samples during their storage at 4 °C. Control (<span style="color:#A4A4A4">●</span>): yoghurt made with milk from cows with A1A2 and A2A2 β-CN genotypes; A2 (●): yoghurt made with milk from cows with A2A2 β-CN genotype; L*: luminosity, a*: green–red, b*: blue–yellow. Data are means ± standard deviation. <sup>a,b,c</sup> For each color parameter, type of yoghurt and during the storage time, values with different superscripts differed significantly (<span class="html-italic">p</span> &lt; 0.05). <sup>x,y</sup> For each day of storage and color parameter, values with different superscripts indicate significant differences (<span class="html-italic">p</span> &lt; 0.05) between the Control and A2 samples.</p>
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<p>Firmness of yoghurts during their storage at 4 °C. Control (<span style="color:#A4A4A4">●</span>): yoghurt made with milk from cows with A1A2 and A2A2 β-CN genotypes; A2 (●): yoghurt made with milk from cows with A2A2 β-CN genotype; N: Newtons; Data are means ± standard deviation. <sup>a,b</sup> For each type of yoghurt and during the storage time, values with different superscripts differed significantly (<span class="html-italic">p</span> &lt; 0.05). <sup>x,y</sup> For each day of storage, values with different superscripts indicate significant differences (<span class="html-italic">p</span> &lt; 0.05) between the Control and A2 samples.</p>
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<p>Scores obtained in the sensory evaluation of Control and A2 yoghurts, by the expert panel, at 15 days of storage. The Control sample was considered as the reference. Control: yoghurt made with milk from cows with A1A2 and A2A2 β-CN genotypes. A2: yoghurt made with milk from cows with A2A2 β-CN genotype.* <span class="html-italic">p</span> ≤ 0.05.</p>
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<p>Scores obtained in the sensory evaluation of Control (<span style="color:#A4A4A4">●</span>) and A2 (●) yoghurts, at 15 days of storage, conducted by the panel of consumers. Control: yoghurt made with milk from cows of A1A2 and A2A2 β-CN genotypes. A2: yoghurt made with milk from cows with A2A2 β-CN genotype. * <span class="html-italic">p</span> ≤ 0.05. *** <span class="html-italic">p</span> ≤ 0.001.</p>
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24 pages, 4507 KiB  
Article
Exploring the Interaction of Biotinylated FcGamma RI and IgG1 Monoclonal Antibodies on Streptavidin-Coated Plasmonic Sensor Chips for Label-Free VEGF Detection
by Soodeh Salimi Khaligh, Fahd Khalid-Salako, Hasan Kurt and Meral Yüce
Biosensors 2024, 14(12), 634; https://doi.org/10.3390/bios14120634 - 20 Dec 2024
Viewed by 240
Abstract
Vascular endothelial growth factor (VEGF) is a critical angiogenesis biomarker associated with various pathological conditions, including cancer. This study leverages pre-biotinylated FcγRI interactions with IgG1-type monoclonal antibodies to develop a sensitive VEGF detection method. Utilizing surface plasmon resonance (SPR) technology, we characterized the [...] Read more.
Vascular endothelial growth factor (VEGF) is a critical angiogenesis biomarker associated with various pathological conditions, including cancer. This study leverages pre-biotinylated FcγRI interactions with IgG1-type monoclonal antibodies to develop a sensitive VEGF detection method. Utilizing surface plasmon resonance (SPR) technology, we characterized the binding dynamics of immobilized biotinylated FcγRI to an IgG1-type antibody, Bevacizumab (AVT), through kinetic studies and investigated suitable conditions for sensor surface regeneration. Subsequently, we characterized the binding of FcγRI-captured AVT to VEGF, calculating kinetic constants and binding affinity. A calibration curve was established to analyze the VEGF quantification capacity and accuracy of the biosensor, computing the limits of blank, detection, and quantification at a 95% confidence interval. Additionally, the specificity of the biosensor for VEGF over other protein analytes was assessed. This innovative biomimetic approach enabled FcγRI-mediated site-specific AVT capture, establishing a stable and reusable platform for detecting and accurately quantifying VEGF. The results indicate the effectiveness of the plasmonic sensor platform for VEGF detection, making it suitable for research applications and, potentially, clinical diagnostics. Utilizing FcγRI-IgG1 antibody binding, this study highlights the industrial and clinical value of advanced biosensing technologies, offering insights to enhance therapeutic monitoring and improve outcomes in anti-VEGF therapies. Full article
(This article belongs to the Special Issue Advances in Plasmonic Biosensing Technology)
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Figure 1

Figure 1
<p>A schematic of the VEGF SPR biosensor setup. Biotinylated FcγRI is immobilized on the streptavidin-coated sensor surface. The mAb is captured by the immobilized FcγRI through high-affinity interactions with the mAb Fc regions, orienting the mAb Fab regions for the optimal detection and quantification of VEGF. Created in BioRender. Khalid-Salako, F. (2024) <a href="https://BioRender.com/g42b753" target="_blank">https://BioRender.com/g42b753</a>.</p>
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<p>Sensorgram of biotinylated−FcγRI immobilization on streptavidin-coated SPR sensor chip.</p>
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<p>Baseline and stability trends over five repeated cycles as observed in (<b>A</b>) 10 mM acetate buffer pH 5.5, 5, 4.5, and 4.0; (<b>B</b>) glycine hydrochloride pH 3.0, 2.0, and 1.5; (<b>C</b>) 5 M NaCl, 4 M MgCl<sub>2</sub>, and 0.5% SDS; (<b>D</b>) 50 mM citrate buffer (pH 3.0), 50 mM phosphate buffer (pH 3.0), and ethylene glycol.</p>
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<p>(<b>i</b>) Adjusted Regeneration verification sensorgrams and (<b>ii</b>) normalized response trends of (<b>A</b>) glycine HCl (pH 3); (<b>B</b>) 10 mM acetate buffer (pH 4.5); (<b>C</b>) 50 mM phosphate buffer (pH 3); and (<b>D</b>) 50 mM citrate buffer (pH 3). The sensorgrams have been adjusted, making the baseline report point to the origins of both the x and y axes. This allows for the comparison of sensorgram shapes across the 15 cycles in each run, representing changes to the sensor surface during the run. The normalized response trends (<b>ii</b>) show the NReq of successive AVT runs in the active flow channel and the NReq for the double-referenced responses for each cycle. A one-phase exponential decay fitting curve was calculated for the double-referenced <sub>N</sub>R<sub>eq</sub> values for each condition, and the decay constant (λ) of the curve was indicated (Origin 2024b. OriginLab Corporation, Northampton, MA, USA).</p>
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<p>Comparisons of normalized double-referenced responses across the cycles in each regeneration condition. The difference between the double-referenced N<sub>Req</sub> observed in the first and last cycles for each regeneration condition is indicated.</p>
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<p>FcγRI−AVT Binding. (<b>A</b>) Representative sensorgram of AVT binding to FcγRI, fitted with the heterogeneous ligand kinetic model. (<b>B</b>) The binding affinity of AVT to FcγRI obtained by the Biacore Evaluation steady-state affinity algorithm. Sensorgrams were obtained as plots of average response from three assay repeats per data point. Steady-state affinity and kinetic constants are presented as mean ± SD.</p>
Full article ">Figure 7
<p>VEGF Binding to AVT. (<b>A</b>) A representative sensorgram of VEGF binding to FcγRI−captured AVT, fitted with the heterogeneous ligand kinetic model. (<b>B</b>) The binding affinity of VEGF to AVT was obtained by the Biacore Evaluation Steady-State affinity algorithm. Sensorgrams were obtained as plots of average response from nine repeats (three assay repeats on three flow channels) per data point. Steady-State affinity and kinetic constants are presented as mean ± SD.</p>
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<p>VEGF concentration analysis. (<b>A</b>) Bar plot of VEGF binding response (R<sub>eq</sub>) to AVT captured on a biotinylated FcγRI-immobilized surface at 0, 1.1, 3.3, 10, 30, and 90 nM. (<b>B</b>) Relative response at equilibrium (R<sub>eq</sub>) against concentration curve, fitted with the four-parameter logistic fitting model. The model visually fits the data plot well, as demonstrated in the low adjusted chi-squared and R-squared values. (<b>C</b>) A linearity plot demonstrating the linear correlation of concentration with the fitted model-calculated concentration.</p>
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<p>Biosensor VEGF specificity. (<b>A</b>) Sensorgram of response obtained with injections of VEGF, TNF-α, and HER2 at 30 nM, as well as BSA (0.1 mg·mL<sup>−1</sup>). (<b>B</b>) Average double−referenced R<sub>eq</sub> obtained with each analyte (n = 9). The specificity of the biosensor setup for VEGF is demonstrated in the statistically significant average double-referenced R<sub>eq</sub> obtained with VEGF, compared to other analytes (***—<span class="html-italic">p</span> &lt; 0.0001).</p>
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22 pages, 11558 KiB  
Article
Chemical Composition and Antibacterial Effect of Clove and Thyme Essential Oils on Growth Inhibition and Biofilm Formation of Arcobacter spp. and Other Bacteria
by Leona Hofmeisterová, Tomáš Bajer, Maciej Walczak and David Šilha
Antibiotics 2024, 13(12), 1232; https://doi.org/10.3390/antibiotics13121232 - 20 Dec 2024
Viewed by 316
Abstract
Background: In recent years, significant resistance of microorganisms to antibiotics has been observed. A biofilm is a structure that significantly aids the survival of the microbial population and also significantly affects its resistance. Methods: Thyme and clove essential oils (EOs) were subjected to [...] Read more.
Background: In recent years, significant resistance of microorganisms to antibiotics has been observed. A biofilm is a structure that significantly aids the survival of the microbial population and also significantly affects its resistance. Methods: Thyme and clove essential oils (EOs) were subjected to chemical analysis using gas chromatography coupled to mass spectrometry (GC-MS) and gas chromatography with a flame ionization detector (GC-FID). Furthermore, the antimicrobial effect of these EOs was tested in both the liquid and vapor phases using the volatilization method. The effect of the EOs on growth parameters was monitored using an RTS-8 bioreactor. However, the effect of the EOs on the biofilm formation of commonly occurring bacteria with pathogenic potential was also monitored, but for less described and yet clinically important strains of Arcobacter spp. Results: In total, 37 and 28 compounds were identified in the thyme and clove EO samples, respectively. The most common were terpenes and also derivatives of phenolic substances. Both EOs exhibited antimicrobial activity in the liquid and/or vapor phase against at least some strains. The determined antimicrobial activity of thyme and clove oil was in the range of 32–1024 µg/mL in the liquid phase and 512–1024 µg/mL in the vapor phase, respectively. The results of the antimicrobial effect are also supported by similar conclusions from monitoring growth curves using the RTS bioreactor. The effect of EOs on biofilm formation differed between strains. Biofilm formation of Pseudomonas aeruginosa was completely suppressed in an environment with a thyme EO concentration of 1024 µg/mL. On the other hand, increased biofilm formation was found, e.g., in an environment of low concentration (1–32 µg/mL). Conclusions: The potential of using natural matrices as antimicrobials or preservatives is evident. The effect of these EOs on biofilm formation, especially Arcobacter strains, is described for the first time. Full article
(This article belongs to the Special Issue Microbial Biofilms: Identification, Resistance and Novel Drugs)
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Figure 1

Figure 1
<p>Growth curves of selected bacteria in a thyme essential oil environment. (<b>A</b>) <span class="html-italic">Pseudomonas aeruginosa</span> CCM 1961; (<b>B</b>) <span class="html-italic">Staphylococcus aureus</span> CCM 4223; (<b>C</b>) <span class="html-italic">Escherichia coli</span> CCM 2024; (<b>D</b>) <span class="html-italic">Enterococcus faecalis</span> CCM 4222. <span class="html-fig-inline" id="antibiotics-13-01232-i001"><img alt="Antibiotics 13 01232 i001" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i001.png"/></span> negative control; <span class="html-fig-inline" id="antibiotics-13-01232-i002"><img alt="Antibiotics 13 01232 i002" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i002.png"/></span> positive control; <span class="html-fig-inline" id="antibiotics-13-01232-i003"><img alt="Antibiotics 13 01232 i003" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i003.png"/></span> 32 µg/mL; <span class="html-fig-inline" id="antibiotics-13-01232-i004"><img alt="Antibiotics 13 01232 i004" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i004.png"/></span> 64 µg/mL; <span class="html-fig-inline" id="antibiotics-13-01232-i005"><img alt="Antibiotics 13 01232 i005" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i005.png"/></span> 128 µg/mL; <span class="html-fig-inline" id="antibiotics-13-01232-i006"><img alt="Antibiotics 13 01232 i006" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i006.png"/></span> 256 µg/mL; <span class="html-fig-inline" id="antibiotics-13-01232-i007"><img alt="Antibiotics 13 01232 i007" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i007.png"/></span> 512 µg/mL; <span class="html-fig-inline" id="antibiotics-13-01232-i008"><img alt="Antibiotics 13 01232 i008" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i008.png"/></span> 1024 µg/mL.</p>
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<p>Growth curves of selected bacteria in a thyme essential oil environment. (<b>A</b>) <span class="html-italic">Arcobacter butzleri</span> CCUG 30484; (<b>B</b>) <span class="html-italic">Arcobacter cryaerophilus</span> CCM 7050; (<b>C</b>) <span class="html-italic">Arcobacter skirrowii</span> LMG 6621; (<b>D</b>) <span class="html-italic">Arcobacter defluvii</span> LMG 25694. <span class="html-fig-inline" id="antibiotics-13-01232-i001"><img alt="Antibiotics 13 01232 i001" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i001.png"/></span> negative control; <span class="html-fig-inline" id="antibiotics-13-01232-i002"><img alt="Antibiotics 13 01232 i002" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i002.png"/></span> positive control; <span class="html-fig-inline" id="antibiotics-13-01232-i003"><img alt="Antibiotics 13 01232 i003" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i003.png"/></span> 32 µg/mL; <span class="html-fig-inline" id="antibiotics-13-01232-i004"><img alt="Antibiotics 13 01232 i004" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i004.png"/></span> 64 µg/mL; <span class="html-fig-inline" id="antibiotics-13-01232-i005"><img alt="Antibiotics 13 01232 i005" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i005.png"/></span> 128 µg/mL; <span class="html-fig-inline" id="antibiotics-13-01232-i006"><img alt="Antibiotics 13 01232 i006" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i006.png"/></span> 256 µg/mL; <span class="html-fig-inline" id="antibiotics-13-01232-i007"><img alt="Antibiotics 13 01232 i007" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i007.png"/></span> 512 µg/mL; <span class="html-fig-inline" id="antibiotics-13-01232-i008"><img alt="Antibiotics 13 01232 i008" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i008.png"/></span> 1024 µg/mL.</p>
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<p>Growth curves of selected bacteria in a clove essential oil environment. (<b>A</b>) <span class="html-italic">Pseudomonas aeruginosa</span> CCM 1961; (<b>B</b>) <span class="html-italic">Staphylococcus aureus</span> CCM 4223; (<b>C</b>) <span class="html-italic">Escherichia coli</span> CCM 2024; (<b>D</b>) <span class="html-italic">Enterococcus faecalis</span> CCM 4222. <span class="html-fig-inline" id="antibiotics-13-01232-i001"><img alt="Antibiotics 13 01232 i001" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i001.png"/></span> negative control; <span class="html-fig-inline" id="antibiotics-13-01232-i002"><img alt="Antibiotics 13 01232 i002" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i002.png"/></span> positive control; <span class="html-fig-inline" id="antibiotics-13-01232-i003"><img alt="Antibiotics 13 01232 i003" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i003.png"/></span> 32 µg/mL; <span class="html-fig-inline" id="antibiotics-13-01232-i004"><img alt="Antibiotics 13 01232 i004" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i004.png"/></span> 64 µg/mL; <span class="html-fig-inline" id="antibiotics-13-01232-i005"><img alt="Antibiotics 13 01232 i005" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i005.png"/></span> 128 µg/mL; <span class="html-fig-inline" id="antibiotics-13-01232-i006"><img alt="Antibiotics 13 01232 i006" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i006.png"/></span> 256 µg/mL; <span class="html-fig-inline" id="antibiotics-13-01232-i007"><img alt="Antibiotics 13 01232 i007" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i007.png"/></span> 512 µg/mL; <span class="html-fig-inline" id="antibiotics-13-01232-i008"><img alt="Antibiotics 13 01232 i008" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i008.png"/></span> 1024 µg/mL.</p>
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<p>Growth curves of selected bacteria in a clove essential oil environment. (<b>A</b>) <span class="html-italic">Arcobacter butzleri</span> CCUG 30484; (<b>B</b>) <span class="html-italic">Arcobacter cryaerophilus</span> CCM 7050; (<b>C</b>) <span class="html-italic">Arcobacter skirrowii</span> LMG 6621; (<b>D</b>) <span class="html-italic">Arcobacter defluvii</span> LMG 25694. <span class="html-fig-inline" id="antibiotics-13-01232-i001"><img alt="Antibiotics 13 01232 i001" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i001.png"/></span> negative control; <span class="html-fig-inline" id="antibiotics-13-01232-i002"><img alt="Antibiotics 13 01232 i002" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i002.png"/></span> positive control; <span class="html-fig-inline" id="antibiotics-13-01232-i003"><img alt="Antibiotics 13 01232 i003" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i003.png"/></span> 32 µg/mL; <span class="html-fig-inline" id="antibiotics-13-01232-i004"><img alt="Antibiotics 13 01232 i004" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i004.png"/></span> 64 µg/mL; <span class="html-fig-inline" id="antibiotics-13-01232-i005"><img alt="Antibiotics 13 01232 i005" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i005.png"/></span> 128 µg/mL; <span class="html-fig-inline" id="antibiotics-13-01232-i006"><img alt="Antibiotics 13 01232 i006" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i006.png"/></span> 256 µg/mL; <span class="html-fig-inline" id="antibiotics-13-01232-i007"><img alt="Antibiotics 13 01232 i007" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i007.png"/></span> 512 µg/mL; <span class="html-fig-inline" id="antibiotics-13-01232-i008"><img alt="Antibiotics 13 01232 i008" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i008.png"/></span> 1024 µg/mL.</p>
Full article ">Figure 4 Cont.
<p>Growth curves of selected bacteria in a clove essential oil environment. (<b>A</b>) <span class="html-italic">Arcobacter butzleri</span> CCUG 30484; (<b>B</b>) <span class="html-italic">Arcobacter cryaerophilus</span> CCM 7050; (<b>C</b>) <span class="html-italic">Arcobacter skirrowii</span> LMG 6621; (<b>D</b>) <span class="html-italic">Arcobacter defluvii</span> LMG 25694. <span class="html-fig-inline" id="antibiotics-13-01232-i001"><img alt="Antibiotics 13 01232 i001" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i001.png"/></span> negative control; <span class="html-fig-inline" id="antibiotics-13-01232-i002"><img alt="Antibiotics 13 01232 i002" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i002.png"/></span> positive control; <span class="html-fig-inline" id="antibiotics-13-01232-i003"><img alt="Antibiotics 13 01232 i003" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i003.png"/></span> 32 µg/mL; <span class="html-fig-inline" id="antibiotics-13-01232-i004"><img alt="Antibiotics 13 01232 i004" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i004.png"/></span> 64 µg/mL; <span class="html-fig-inline" id="antibiotics-13-01232-i005"><img alt="Antibiotics 13 01232 i005" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i005.png"/></span> 128 µg/mL; <span class="html-fig-inline" id="antibiotics-13-01232-i006"><img alt="Antibiotics 13 01232 i006" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i006.png"/></span> 256 µg/mL; <span class="html-fig-inline" id="antibiotics-13-01232-i007"><img alt="Antibiotics 13 01232 i007" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i007.png"/></span> 512 µg/mL; <span class="html-fig-inline" id="antibiotics-13-01232-i008"><img alt="Antibiotics 13 01232 i008" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i008.png"/></span> 1024 µg/mL.</p>
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<p>Effect of thyme EO on biofilm formation of common bacteria (<b>A</b>) and <span class="html-italic">Arcobacter</span> species (<b>B</b>). Data are presented as mean value of optical density (OD) ± SD. <span class="html-fig-inline" id="antibiotics-13-01232-i009"><img alt="Antibiotics 13 01232 i009" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i009.png"/></span> <span class="html-italic">Pseudomonas aeruginosa</span> CCM 1961, <span class="html-italic">Arcobacter butzleri</span> CCUG 30484; <span class="html-fig-inline" id="antibiotics-13-01232-i010"><img alt="Antibiotics 13 01232 i010" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i010.png"/></span> <span class="html-italic">Staphylococcus aureus</span> CCM 4223, <span class="html-italic">Arcobacter cryaerophilus</span> CCM 7050; <span class="html-fig-inline" id="antibiotics-13-01232-i011"><img alt="Antibiotics 13 01232 i011" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i011.png"/></span> <span class="html-italic">Enterococcus faecalis</span> CCM 4224, <span class="html-italic">Arcobacter skirrowii</span> LMG 6621; <span class="html-fig-inline" id="antibiotics-13-01232-i012"><img alt="Antibiotics 13 01232 i012" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i012.png"/></span> <span class="html-italic">Escherichia coli</span> CCM 2024, <span class="html-italic">Arcobacter defluvii</span> LMG 25694; <span class="html-fig-inline" id="antibiotics-13-01232-i013"><img alt="Antibiotics 13 01232 i013" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i013.png"/></span> positive control.</p>
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<p>Effect of clove EO on biofilm formation of common bacteria (<b>A</b>) and <span class="html-italic">Arcobacter</span> species (<b>B</b>). Data are presented as mean value of optical density (OD) ± SD. <span class="html-fig-inline" id="antibiotics-13-01232-i009"><img alt="Antibiotics 13 01232 i009" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i009.png"/></span> <span class="html-italic">Pseudomonas aeruginosa</span> CCM 1961, <span class="html-italic">Arcobacter butzleri</span> CCUG 30484; <span class="html-fig-inline" id="antibiotics-13-01232-i010"><img alt="Antibiotics 13 01232 i010" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i010.png"/></span> <span class="html-italic">Staphylococcus aureus</span> CCM 4223, <span class="html-italic">Arcobacter cryaerophilus</span> CCM 7050; <span class="html-fig-inline" id="antibiotics-13-01232-i011"><img alt="Antibiotics 13 01232 i011" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i011.png"/></span> <span class="html-italic">Enterococcus faecalis</span> CCM 4224, <span class="html-italic">Arcobacter skirrowii</span> LMG 6621; <span class="html-fig-inline" id="antibiotics-13-01232-i012"><img alt="Antibiotics 13 01232 i012" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i012.png"/></span> <span class="html-italic">Escherichia coli</span> CCM 2024, <span class="html-italic">Arcobacter defluvii</span> LMG 25694; <span class="html-fig-inline" id="antibiotics-13-01232-i013"><img alt="Antibiotics 13 01232 i013" src="/antibiotics/antibiotics-13-01232/article_deploy/html/images/antibiotics-13-01232-i013.png"/></span> positive control.</p>
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14 pages, 1463 KiB  
Article
Similarly to BmToll9-1, BmToll9-2 Is a Positive Regulator of the Humoral Immune Response in the Silkworm, Bombyx mori
by Jisheng Liu, Weijian Chen, Sihua Chen, Shuqiang Li and Luc Swevers
Insects 2024, 15(12), 1005; https://doi.org/10.3390/insects15121005 - 19 Dec 2024
Viewed by 280
Abstract
Toll receptors play important roles in the development and innate immunity of insects. Previously, we reported the immunological function of BmToll9-2 in silkworm, Bombyx mori, larvae. In this study, we focused on the role of BmToll9-2 as a regulator in the Toll [...] Read more.
Toll receptors play important roles in the development and innate immunity of insects. Previously, we reported the immunological function of BmToll9-2 in silkworm, Bombyx mori, larvae. In this study, we focused on the role of BmToll9-2 as a regulator in the Toll signaling pathway. The expressions of most signaling genes in the Toll pathway, as well as immune effectors, were reduced after the RNAi of BmToll9-2. Coincidentally, hemolymph from BmToll9-2-silenced larvae exhibited decreased antibacterial activity in the growth of Escherichia coli, demonstrated either by growth curve or inhibitory zone experiments. The oral administration of heat-inactivated E. coli and Staphylococcus aureus following the RNAi of BmToll9-2 up-regulated the expression of most signaling genes in the Toll pathway and downstream immune effectors. The above results indicate that BmToll9-2 is positively involved in the Toll signaling pathway. As a positive regulator, BmToll9-2 is shown to be activated preferentially against E. coli and, in turn, positively modulates the humoral immune response in antibacterial activity. Full article
(This article belongs to the Collection Insect Immunity: Evolution, Genomics and Physiology)
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Figure 1
<p>The relative expression of signaling genes in the Toll pathway after the RNAi of <span class="html-italic">BmToll9-2</span>. Larvae of the 5th instar were injected with dsBmToll9-2, and dsGFP served as a control. Data are represented as the means ± standard deviations of three biological replications. Asterisks indicate significant differences from dsGFP injection groups: * <span class="html-italic">p</span> &lt; 0.05; ** <span class="html-italic">p</span> &lt; 0.01; *** <span class="html-italic">p</span> &lt; 0.001; and **** <span class="html-italic">p</span> &lt; 0.0001. ns, not significant.</p>
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<p>The relative expression of immune effector genes after the RNAi of <span class="html-italic">BmToll9-2</span>. Larvae of the 5th instar were injected with dsBmToll9-2, and dsGFP served as a control. Data are represented as the means ± standard deviations of three biological replications. Asterisks indicate significant differences from dsGFP injection groups: * <span class="html-italic">p</span> &lt; 0.05; ** <span class="html-italic">p</span> &lt; 0.01; and **** <span class="html-italic">p</span> &lt; 0.0001. ns, not significant.</p>
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<p>Antibacterial activity assays of <span class="html-italic">B. mori</span> hemolymph against <span class="html-italic">E. coli</span> and <span class="html-italic">S. aureus</span> after RNAi of <span class="html-italic">BmToll9-2.</span> Hemolymph was collected 24 h after dsRNA injection and tested for antibacterial activity. (<b>A</b>) Bacterial growth curve experiment. (<b>B</b>) Inhibition zone experiment. dsBmToll9-2: hemolymph from larvae injected with dsBmToll9-2; dsGFP: hemolymph from larvae injected with dsGFP; H<sub>2</sub>O: sterile water; antibiotic: ampicillin. Asterisks indicate significant differences from dsGFP injection groups: * <span class="html-italic">p</span> &lt; 0.05 and *** <span class="html-italic">p</span> &lt; 0.001.</p>
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<p>The relative expression of signaling genes in the Toll pathway following challenges with heat-inactivated bacteria after the RNAi of <span class="html-italic">BmToll9-2</span>. Larvae of 5th instar were injected with dsBmToll9-2 or dsGFP. Then, the larvae were fed with heat-killed (<b>A</b>) <span class="html-italic">E. coli</span> or (<b>B</b>) <span class="html-italic">S. aureus.</span> Data are represented as the means ± standard deviations of three biological replications. Asterisks indicate significant differences from dsGFP injection groups: * <span class="html-italic">p</span> &lt; 0.05; ** <span class="html-italic">p</span> &lt; 0.01; and **** <span class="html-italic">p</span> &lt; 0.0001. ns, not significant.</p>
Full article ">Figure 5
<p>The relative expression of immune effector genes following challenges with heat-inactivated bacteria after the RNAi of <span class="html-italic">BmToll9-2</span>. Larvae of 5th instar were injected with dsBmToll9-2 or dsGFP. Then, the larvae were fed with heat-killed (<b>A</b>) <span class="html-italic">E. coli</span> or (<b>B</b>) <span class="html-italic">S. aureus</span>. Data are represented as the means ± standard deviations of three biological replications. Asterisks indicate significant differences from dsGFP injection groups: * <span class="html-italic">p</span> &lt; 0.05; ** <span class="html-italic">p</span> &lt; 0.01; *** <span class="html-italic">p</span> &lt; 0.001; and **** <span class="html-italic">p</span> &lt; 0.0001. ns, not significant.</p>
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9 pages, 915 KiB  
Brief Report
Growth Differentiation Factor 15 as a Marker for Chronic Ventricular Pacing
by Christoph Edlinger, Marwin Bannehr, Michael Lichtenauer, Vera Paar, Paulina Jankowska, Laurenz Hauptmann, Uta C. Hoppe, Christian Butter and Christiana Schernthaner
J. Clin. Med. 2024, 13(24), 7748; https://doi.org/10.3390/jcm13247748 - 18 Dec 2024
Viewed by 597
Abstract
Background/Objectives: Right ventricular pacing is an effective and safe treatment option for patients experiencing symptomatic bradycardia. However, some individuals may develop left ventricular dysfunction as a consequence. Growth differentiation factor 15 (GDF-15), which is not present in a healthy adult heart, is upregulated [...] Read more.
Background/Objectives: Right ventricular pacing is an effective and safe treatment option for patients experiencing symptomatic bradycardia. However, some individuals may develop left ventricular dysfunction as a consequence. Growth differentiation factor 15 (GDF-15), which is not present in a healthy adult heart, is upregulated in cardiomyocytes in response to various stress stimuli. This study aimed to explore the potential of GDF-15 as a biomarker for chronic right ventricular pacing. Methods: This single-center cross-sectional cohort study analyzed data from 265 consecutive patients (60.4% male) with either single- or dual-chamber pacemakers, all lacking pre-existing heart failure, who attended the outpatient department for routine follow-up. Chronic right ventricular (RV) pacing was defined as pacing exceeding 40% over the past year. Serum samples were collected, and GDF-15 levels were measured using a commercially available immunoassay (R&D Systems Inc., Minneapolis, MN, USA). Student’s t-test was utilized to assess group differences, and receiver operating characteristic (ROC) analysis was employed to evaluate diagnostic performance. Results: When stratifying patients by pacing burden, GDF-15 levels were significantly higher in those with pacing over 40% compared to those with 40% or less (789 ± 293 pg/mL vs. 1186 ± 592 pg/mL; p < 0.001). The ROC analysis indicated that GDF-15 serves as a marker for chronic RV pacing, yielding an area under the curve of 0.713 (95% confidence interval 0.650–0.776; p < 0.001). Conclusions: This study suggests that GDF-15 may be a valuable biomarker for chronic right ventricular pacing. Full article
(This article belongs to the Section Cardiology)
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<p>Patients’ flow through the study.</p>
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<p>* GDF-15 levels separated by a pacing burden of 40% [<a href="#B26-jcm-13-07748" class="html-bibr">26</a>]. This figure has already been presented by our group as a scientific abstract at the national level at the “Jahrestagung der deutschen Gesellschaft für Kardiologie 2023” congress.</p>
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<p>Receiver operating characteristics for GDF-15 levels and chronic RV pacing [<a href="#B26-jcm-13-07748" class="html-bibr">26</a>]. This figure has already been presented by our group as a scientific abstract at the national level at the “Jahrestagung der deutschen Gesellschaft für Kardiologie 2023” congress.</p>
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17 pages, 3687 KiB  
Article
Advancing Grey Modeling with a Novel Time-Varying Approach for Predicting Solar Energy Generation in the United States
by Ke Zhou, Ziji Zhao, Lin Xia and Jinghua Wu
Sustainability 2024, 16(24), 11112; https://doi.org/10.3390/su162411112 - 18 Dec 2024
Viewed by 307
Abstract
This paper proposes a novel time-varying discrete grey model (TVDGM(1,1)) to precisely forecast solar energy generation in the United States. First, the model utilizes the anti-forgetting curve as the weight function for the accumulation of the original sequence, which effectively ensures the prioritization [...] Read more.
This paper proposes a novel time-varying discrete grey model (TVDGM(1,1)) to precisely forecast solar energy generation in the United States. First, the model utilizes the anti-forgetting curve as the weight function for the accumulation of the original sequence, which effectively ensures the prioritization of new information within the model. Second, the time response function of the model is derived through mathematical induction, which effectively addresses the common jump errors encountered when transitioning from difference equations to differential equations in traditional grey models. Research shows that compared to seven other methods, this model achieves better predictive performance, with an error rate of only 2.95%. Finally, this method is applied to forecast future solar energy generation in the United States, and the results indicate an average annual growth rate of 23.67% from 2024 to 2030. This study advances grey modeling techniques using a novel time-varying approach while providing critical technical and data support for energy planning. Full article
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<p>The m-order time-varying function.</p>
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<p>Operating steps.</p>
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<p>U.S. solar energy generation and rate of increase from 2013 to 2023.</p>
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<p>Parameter selection process.</p>
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<p>The change trajectories of the fitted and predicted data obtained by eight methods.</p>
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<p>The change trajectories of the fitted and predicted data obtained by eight methods.</p>
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<p>Comparison of MAPE of different methods.</p>
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<p>Comparison of forecasting APE of different methods.</p>
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<p>The future trend of solar energy generation in the U.S.</p>
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9 pages, 886 KiB  
Article
Prediction of Bacterial Etiology in Pediatric Patients with Acute Epididymitis: A Comparison of C-Reactive Protein and Urinalysis in Terms of Diagnostic Accuracy
by Kang Liu, Chi-Shin Tseng, Shin-Mei Wong, Kuo-How Huang, I-Ni Chiang, Chao-Yuan Huang and Chih-Hung Chiang
Biomedicines 2024, 12(12), 2866; https://doi.org/10.3390/biomedicines12122866 - 17 Dec 2024
Viewed by 351
Abstract
Background/Objectives: We aimed to determine the proportion of bacterial etiology in pediatric acute epididymitis (AE) and to compare the predictive accuracy of C-reactive protein (CRP) and urinalysis. Methods: Pediatric patients diagnosed with AE in National Taiwan University Hospital from 2009 to [...] Read more.
Background/Objectives: We aimed to determine the proportion of bacterial etiology in pediatric acute epididymitis (AE) and to compare the predictive accuracy of C-reactive protein (CRP) and urinalysis. Methods: Pediatric patients diagnosed with AE in National Taiwan University Hospital from 2009 to 2018 were retrospectively identified. Patient profiles, including clinical symptoms, physical findings, laboratory data, and treatment types, were collected. Patients were categorized into acute bacterial epididymitis (ABE) or acute non-bacterial epididymitis (ANBE) groups based on the presence or absence of bacterial growth in urine cultures. The primary endpoints were the proportion of patients with ABE and those who received antibiotic therapy. The secondary endpoint was to assess the diagnostic accuracy of CRP and urinalysis for ABE. Results: The final cohort comprised of 289 patients, of whom 216 (74.7%) received antibiotics. Urine culture was obtained for 167 (57.8%) patients, and 52 (31.1%) were positive for a bacterial source. The median CRP and positive rate for urinalysis were significantly higher in the ABE group compared to the ANBE group (CRP: 3.68 vs. 0.25 mg/dL; p < 0.001; urinalysis: 41% vs. 23%; p = 0.005). Multivariate analysis revealed that elevated CRP was significantly associated with AE (odds ratio [OR], 61.96; p < 0.001), whereas positive urinalysis was not (OR, 2.09; p = 0.33). The area under the receiver operating characteristic curves for CRP was higher than that for urinalysis (0.82 vs. 0.72). Conclusions: Serum CRP proved to be a more accurate and reliable tool than urinalysis for predicting pediatric ABE. This could provide guidance to practitioners when prescribing antibiotics in the future. Full article
(This article belongs to the Section Microbiology in Human Health and Disease)
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<p>Age distribution of patients with acute epididymitis. ABE, acute bacterial epididymitis; ANBE, acute non-bacterial epididymitis; U/C, urine culture.</p>
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<p>Receiver operating characteristic (ROC) curves for predictors of ABE. ABE, acute bacterial epididymitis; AUC, area under the curve; CRP, C-creative protein; HPF, high-power field; WBC, white blood cells.</p>
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