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KEGG   Xiphophorus maculatus (southern platyfish): 102218310
Entry
102218310         CDS       T02923                                 
Name
(RefSeq) tropomyosin beta chain
  KO
K10374  tropomyosin 2
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma04260  Cardiac muscle contraction
xma04261  Adrenergic signaling in cardiomyocytes
xma04814  Motor proteins
xma04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:xma00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    102218310
   04820 Cytoskeleton in muscle cells
    102218310
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:xma04812]
    102218310
Cytoskeleton proteins [BR:xma04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     102218310
SSDB
Motif
Pfam: Tropomyosin Laminin_II CLZ PUMA_CC ATG16 Laminin_I XhlA TMF_DNA_bd ERM_helical Crescentin CENP-F_leu_zip SlyX Nuf2_DHR10-like Exonuc_VII_L DUF1664 DUF745 GAS FPP MscS_porin DUF7169 DUF16 DUF5917 Fib_alpha DUF6317 AAA_13 Fez1 CCDC22_CC
Other DBs
NCBI-GeneID: 102218310
NCBI-ProteinID: XP_005810041
Ensembl: ENSXMAG00000007560
UniProt: M3ZZE4
Position
8:27372714..27393999
AA seq 284 aa
MEAIKKKMQMLKLDKENAIDRAEQAEVDKKGAEDKCKQLEEELLGLQKKLKGVEDELDKY
SESLKDAQEKLEQAEKKATDAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRATKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGDLERSE
ERAEVAEAKSADLEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTEKLKEAETRAE
FAERSVAKLEKTIDDLEDEVYAQKLKGKALSEELDLALNDMTTL
NT seq 855 nt   +upstreamnt  +downstreamnt
atggaggccatcaagaagaaaatgcagatgctgaagctggataaggagaatgcgatagac
cgggcagaacaagcagaggttgacaagaagggagccgaggacaaatgcaaacagctggag
gaggagctgctgggcctgcagaagaaactcaaaggagtagaagatgagctggacaaatac
tctgagtctctgaaggatgcccaggagaagctggagcaagcagagaaaaaggcaacggat
gcggaggcagaggtggcgtctctcaatagacgcatccagctggtggaagaggagttggac
cgagctcaggagaggctagctactgctctgcagaagctggaggaggcagagaaagctgca
gatgaaagcgagagaggaatgaaggtgatagagaacagagcaacaaaagatgaagagaaa
atggaaatccaggagatgcagctgaaggaggccaaacacattgctgaggaggcggaccgt
aaatatgaagaggttgcacgtaaactggtgattctggagggagatctggaacgctcagag
gagcgtgctgaggtggctgaggctaaatcagctgaccttgaggaagaattgaaaaatgtc
accaacaacttgaagtccctggaagcccaggctgagaagtactcacaaaaagaggacaaa
tatgaagaagagattaaagtgcttacagagaagctgaaggaggctgaaacccgagcagag
tttgcagaaaggtctgtggctaagctggagaagacgattgatgatctagaagatgaagtg
tatgctcagaagctgaagggcaaggctctcagtgaggagctggacctggccctcaatgac
atgactacactgtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (73)   
   KEGG ORTHOLOGY (1)   
   RefGene (68)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (27)   
   Pfam (27)   
All databases (112)   

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