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KEGG   Scomber japonicus (chub mackerel): 128378975
Entry
128378975         CDS       T09718                                 
Symbol
pdgfab
Name
(RefSeq) platelet-derived growth factor alpha polypeptide b
  KO
K04359  platelet-derived growth factor subunit A
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo04010  MAPK signaling pathway
sjo04020  Calcium signaling pathway
sjo04510  Focal adhesion
sjo04540  Gap junction
sjo04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:sjo04052]
    128378975 (pdgfab)
   00536 Glycosaminoglycan binding proteins [BR:sjo00536]
    128378975 (pdgfab)
Cytokines and neuropeptides [BR:sjo04052]
 Cytokines
  Growth factors (RTK binding)
   128378975 (pdgfab)
Glycosaminoglycan binding proteins [BR:sjo00536]
 Heparan sulfate / Heparin
  Growth factors/receptors
   128378975 (pdgfab)
SSDB
Motif
Pfam: PDGF_N PDGF TraY
Other DBs
NCBI-GeneID: 128378975
NCBI-ProteinID: XP_053194542
Position
18:complement(16403863..16421598)
AA seq 208 aa
MRAALCYFLLWTTYLLLATSEEVEFPQELIDRLSHSEIHSISDLQRLLEIDSVGTGNDVI
EEPKHHKHHNHHKNYSRHPGYYNELKSSQLHSRRKRSLVEEAVPAVCKTRTVIYEIPRSQ
VDPTSANFLIWPPCVEVKRCTGCCNTSNMRCHPSRKHHRTVKVAKVEYVRRRPKLKEVFV
RLEDHLECVCTSQHHVVEHSDAETVDVR
NT seq 627 nt   +upstreamnt  +downstreamnt
atgagagccgcactttgttacttcctgctgtggacgacgtacctgctgctggccacctct
gaggaagtggagtttccccaggagctgatagacagactgtcccacagtgaaatccacagc
atcagcgacctccagcggctactagagattgactccgtaggtacgggaaacgatgttatt
gaggagcccaagcatcacaagcaccacaaccaccataagaactattcccgtcatcctggt
tactacaatgaactgaagagctcccagctccacagccgacgcaagaggagtctcgtggaa
gaggcggtcccagcagtgtgtaagacgcggacggtgatctacgagatccccaggagccag
gtggatcccacatctgctaacttcctgatatggccgccctgtgtggaggtgaagcgctgc
acgggctgctgcaacaccagtaacatgcgctgtcatccttcccgcaagcaccaccgcacc
gtgaaggtggccaaggtggagtacgtgagaaggagacccaagctgaaagaggtctttgtg
cggttagaagaccacctggagtgtgtgtgcacgtcacagcatcatgtggtggagcactca
gatgcagaaacagtggacgtgaggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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