[go: up one dir, main page]
More Web Proxy on the site http://driver.im/
KEGG   Salmo trutta (river trout): 115207977
Entry
115207977         CDS       T08542                                 
Name
(RefSeq) syntaxin-16-like isoform X1
  KO
K08489  syntaxin 16
Organism
stru  Salmo trutta (river trout)
Pathway
stru04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    115207977
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:stru04131]
    115207977
Membrane trafficking [BR:stru04131]
 SNARE
  Syntaxin (Qa)
   Stx-TGN / EE
    115207977
SSDB
Motif
Pfam: SNARE Syntaxin_2 MCPsignal UCH_1 Fusion_gly Orf78 DUF2116 DUF6548
Other DBs
NCBI-GeneID: 115207977
NCBI-ProteinID: XP_029631504
Ensembl: ENSSTUG00000038143
Position
14:37433381..37451921
AA seq 323 aa
MATRRLTDAFLLMRNNAIQNRQILAEQVSTYDPRRTLSTRSNAAELDELADDRMALVSGI
SLDPEAAVGVTKRLPPKWVDGVVEIQYEITRVRQKMKELAALHDKHMNRPTLDDSSEEEH
AIEITTQEITQMFHRCQRAVTGLQTRCGHCTEQEERLLRNVVSSLAGSLQDLSTNFRHTQ
SSYLKRMKNREERSKHFFDSGPLMEEDEDLALYEMGFTDDQLVLVEQNTVMVEEREREVR
QIVQSITDLNEIFRDLAGMVVEQGTVLDRIDFNVEQSCVKTDEGLKQLQKAEQYQKKNRK
MLVILILTVIVVVLILILFGTKF
NT seq 972 nt   +upstreamnt  +downstreamnt
atggcaactaggcgcctgaccgatgccttcttattaatgcggaacaatgcaatccaaaat
cggcagatattggctgagcaagtgagtacatacgacccccgtcgtactctgagtacacgt
agcaatgctgcggagcttgatgagttggctgatgaccgcatggccctggtctcagggatc
agtctggacccagaagctgccgtcggagtcaccaagagactgccgcccaagtgggtagat
ggggtcgttgagattcagtacgaaatcacacgggtccggcagaaaatgaaggagctggcc
gccctacatgacaagcacatgaaccgtcctaccctcgatgacagcagtgaagaggagcat
gccatagagatcaccactcaggagatcacacagatgttccaccggtgtcagcgtgcagtg
acaggtctgcagactcgctgtggccactgcacagagcaggaggagaggctgctgagaaat
gtggtgtcctcgttggcagggagcctgcaagacctgtccaccaacttcagacacacgcag
tctagctatctaaaacgcatgaagaatcgtgaggagagatccaaacacttttttgactct
ggtcctctaatggaggaggatgaagacctggcactatatgaaatggggtttacagatgac
cagctggtcctggtagagcagaacacagtgatggtggaggaacgcgagagagaggtccga
cagatagtccagtccatcaccgacctgaatgagattttccgagacctggcaggaatggtg
gtggaacagggcacagtacttgacagaattgacttcaatgtggagcaatcgtgtgtcaaa
acagacgaggggttaaaacagttacaaaaggctgaacagtatcagaagaaaaaccgaaag
atgctggtcattttaattcttactgttatagttgttgttctaatacttattctatttggg
accaagttctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (8)   
   Pfam (8)   
All databases (26)   

Download RDF
DBGET integrated database retrieval system