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KEGG   Rhincodon typus (whale shark): 109922339
Entry
109922339         CDS       T06055                                 
Symbol
stx16
Name
(RefSeq) syntaxin-16 isoform X2
  KO
K08489  syntaxin 16
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    109922339 (stx16)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rtp04131]
    109922339 (stx16)
Membrane trafficking [BR:rtp04131]
 SNARE
  Syntaxin (Qa)
   Stx-TGN / EE
    109922339 (stx16)
SSDB
Motif
Pfam: SNARE ATG17_like Syntaxin Prominin MCPsignal DUF5345 DUF2116 WXG100 Endonuc_BglI DUF4191 Orf78 TRP DUF6548
Other DBs
NCBI-GeneID: 109922339
NCBI-ProteinID: XP_020377958
Position
19:complement(56204651..56249959)
AA seq 308 aa
MATRSLTDAYVLMRNRAAQSRQLLAEQELDEIADDRMALVSGISLDPEAAIGVTKKLPPK
WVDGVEQIQFDITRIKQKMKELAGLHDKYLNRPTLDDSSEEEHAIEITTQEITQMFHRCQ
RAVQSLQSKWRSCTEQEERVLRNVVTSLAQALQDLSTNFRHAQSNYLKRLKNREERSKHF
FDTSVPLMDDGEDNNLYDKGFTHDQLLLVEENTLMVEEREKEIRQIVQSISDLNEIFREL
ASMIVEQGTILDRIDYNVEQSCIKTEEGLQQLQKAEQYQKKNRKMLVILILFVIVVVLIV
VLIGVKSR
NT seq 927 nt   +upstreamnt  +downstreamnt
atggcgacccgcagtctgaccgatgcctatgtgctgatgcggaaccgagcggcccagagc
cggcagctgctggccgagcaagagttggatgagatagctgatgatcgtatggcattggtg
tctgggatcagcctggatccagaagctgccattggtgtaactaagaaactgcctccaaaa
tgggtggatggagtggaacagattcagtttgacatcaccagaataaaacagaagatgaag
gagctggctggtttacatgacaagtatttgaacaggccaacactggatgacagcagtgag
gaggagcatgcaatagaaatcaccacgcaggaaataacacagatgttccacaggtgtcag
cgagcggtacagagcctgcaaagcaaatggcgcagttgtacagagcaggaagaacgggtc
cttcgaaatgtcgtcacttctctggcacaagcccttcaagatctgtcaaccaactttcgg
catgctcagtccaactatctcaaacgtttgaagaatcgagaggaaaggtccaaacacttt
tttgatacatcagtgccactaatggatgatggtgaagacaacaacctttatgacaaaggt
tttacacacgatcagctgctcctggtggaagagaacactttgatggtggaagagcgagaa
aaggagatccgacagattgtgcagtcaatatcggacttgaatgaaattttcagagagctg
gccagcatgatcgtggagcagggaactatcttggaccgaattgattataatgtggaacag
tcctgtattaaaacggaagagggcttgcagcagttacagaaggcagagcaataccaaaag
aagaatcgaaagatgttggtcattctgatcttgtttgtgatcgtagttgttctcattgtc
gtgttaataggtgtcaaatcaaggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (13)   
   Pfam (13)   
All databases (26)   

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