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KEGG   Cyclopterus lumpus (lumpfish): 117730969
Entry
117730969         CDS       T09199                                 
Symbol
stx16
Name
(RefSeq) syntaxin-16 isoform X1
  KO
K08489  syntaxin 16
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    117730969 (stx16)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:clum04131]
    117730969 (stx16)
Membrane trafficking [BR:clum04131]
 SNARE
  Syntaxin (Qa)
   Stx-TGN / EE
    117730969 (stx16)
SSDB
Motif
Pfam: SNARE ATG17_like Syntaxin_2 MCPsignal T3SS_needle_E DUF2116 DUF6548
Other DBs
NCBI-GeneID: 117730969
NCBI-ProteinID: XP_034388947
Ensembl: ENSCLMG00005010247
Position
5:11921848..11928872
AA seq 321 aa
MATRRLTDAFLLMRNNSIQNRQILAEQVSTYDPRLSTRSNAAELDELADDRMALVSGISL
DPEAAIGVTKKLPPKWIEGIDEIQYEITRVRQKMKDLAVLHDKHMNRPTLDDSSEEEHAI
EITTQEITQMFHRCQRAVTGLQSRCGHCTEQEERLLRNVVSSLAQSLQELSTNFRHTQSG
YLKRMKNREERSKHFFDSGPLMEEDEELAVYDKGFTGDQLMLVEQNTVMVEEREREIRQI
VQSISDLNEIFRDLAGMVVEQGTVLDRIDFNVEQACVKTDDGLKQLQKAEQYQKKNRKML
VILILTVIVIVLIFILFGTKF
NT seq 966 nt   +upstreamnt  +downstreamnt
atggccactaggcgtctgaccgatgccttcttgttaatgcggaacaattcaatccaaaac
cggcagatattggctgagcaagtgagtacatacgacccccgcctgagtacacgtagcaat
gctgcggagcttgatgagctggctgatgatcgaatggccctggtgtcaggaattagtctg
gatcctgaagcggccattggagtcacaaagaaactgccccccaaatggatagaggggatt
gatgagatccagtatgaaatcacacgggttcggcaaaagatgaaggatttggccgtactt
catgacaagcatatgaatcgacccacacttgatgacagtagtgaagaagagcatgccata
gaaatcactactcaggagattacacagatgtttcatcgatgccagcgagctgtgacgggc
ttgcagtctcgttgtggtcactgtaccgagcaggaggaaaggctattgagaaacgtggtc
tcatccctggcacagagcctccaggagctgtccaccaatttcaggcacacacagtccggc
taccttaaacgtatgaagaatcgtgaggagagatcaaagcacttttttgactctggaccc
ttaatggaagaggatgaagaattggctgtatatgacaagggtttcacaggcgatcagctg
atgctggttgagcagaacactgtcatggtggaagaacgagagagggagatccgacagata
gtgcagtcgatctcagatctgaatgagattttcagggacttggctggaatggtggtggaa
cagggcaccgttcttgatagaattgacttcaatgtggagcaggcttgtgtgaaaacggat
gatggacttaaacagttacaaaaggcagaacagtatcagaagaaaaacagaaagatgctg
gtcattttgatcctcactgtcatagtcatcgttctcatttttattctttttggaacaaag
ttttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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