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KEGG   Ciona intestinalis (yellow sea squirt): 100186501
Entry
100186501         CDS       T01056                                 
Name
(RefSeq) chondroitin sulfate synthase 3-like
  KO
K13499  chondroitin sulfate synthase [EC:2.4.1.175 2.4.1.226]
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin00532  Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
cin01100  Metabolic pathways
Module
cin_M00058  Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:cin00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
    100186501
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:cin01003]
    100186501
Enzymes [BR:cin01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.175  glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
     100186501
    2.4.1.226  N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
     100186501
Glycosyltransferases [BR:cin01003]
 Glycan extension
  O-Glycan
   100186501
SSDB
Motif
Pfam: CHGN Fringe Glyco_transf_7C Galactosyl_T
Other DBs
NCBI-GeneID: 100186501
NCBI-ProteinID: XP_002122402
Position
Unknown
AA seq 773 aa
MRARNMDKEKLLYRFLFSCAVGYFLGSFIIRRRTISINSDALTKRVDFLDSKKTVYSAES
SPQRLDLEPSAPKANLYIGLLSVGSNLETRVAASRDTWMTRSGAVIEVYANNNQSQSNIK
TIKLLGVDDNAYPPQKKSFSMLKYMHTAYVDKFDWFVRLDDDAYVDVDKLSMFLNRINSS
QPRYIGSPGYGKGKEDLLSDGDNYCMGGPGMVFSRALMRQLGPHLGECLQHMYTSHEDIE
VGRCVQKYTGIKCTTSWETKKIFFQNYNSGTYTNNIKDITAKQLDEGKIFHANKDPAYQY
RFHTMVLKRKIATILKRIAQAEKDIQIVSLQNGFSDDAGMNAHAQYRWSTIYNRDHYKAD
RSQPMKRMDPTLNHVLVEDTNTFIRVLQTRVNNEFAKLKEVDFINTYFVVNPLHSMDAIS
LLECKFSTGPGKPRTTQHVSVHQRHRFTSATFLSEPIELCPTGCVRKDNEPTVLIKRANE
TPVNFLTALSGRPENFIRFLNNFENSFLTRGEKVNLIVTYFPPEYEVDITTNSSQEIVEV
DGISPNFGKNTPLGPDAKFVTENMNRLQNAYPDSKIAVINLEPGTEFSRGLGLQVAAKSV
ESRDEIIFFSDVDLVFAPEILDHIRRNTIRHKQVYYPVFFSQYDPDVVYVDMPKPQNYFI
FSELAGFWRHFSYGMVSLYASDFDKTNGFDLSIHGWGLEDVHLVNAILAAGLDVFKSTEP
GQVHIFHDKTCDSSLSENQRTSCQNSRAAHYAPSTLLYYLWKTPESIETIEEV
NT seq 2322 nt   +upstreamnt  +downstreamnt
atgagggcgagaaacatggataaagaaaaacttctgtacaggtttctgtttagctgcgca
gtcggctatttcctcgggtcttttataatacgaaggcgaactatttcgattaattcagac
gcactaacaaaacgggtggactttttggacagcaagaaaacagtgtacagtgctgaaagt
tctccacaacggttagatctggaaccttctgcaccaaaagcgaatttgtacatcggttta
ctttctgttggttcaaatttggaaacacgggtagcagcgtcacgtgatacatggatgacg
cgatcaggagcagttattgaagtttatgccaacaataaccaatctcaaagcaatataaag
acaatcaagttacttggtgtggacgataatgcatacccgccgcaaaagaagagcttctca
atgctaaagtatatgcacaccgcatatgtggacaaatttgactggttcgtacgtttggac
gacgacgcatacgtagacgtggataaactatctatgtttctaaatcgaattaattcttcc
caaccgcggtatatcggaagtcctggttatggcaaaggaaaagaagacttattgagcgac
ggcgataattactgcatgggtggtcctggcatggtgttctctcgtgccctcatgcgacag
cttggcccgcatcttggggaatgcttacaacacatgtacacgtcacatgaagacatcgaa
gtcgggcgctgcgtacagaaatacacgggcatcaagtgtacaacttcgtgggagacgaaa
aagatcttcttccagaactataacagcggaacttacacgaataacataaaagacattacc
gctaaacaactcgacgaaggcaaaatattccatgcgaataaggatccagcgtaccaatat
cgcttccacacgatggtgctaaagagaaagattgccaccattttgaaacgtattgcccaa
gccgaaaaggacattcaaatagtttcgctacaaaatggattttcggacgatgctggcatg
aatgcgcatgcgcagtaccgatggagcacaatttacaaccgtgaccattacaaagccgat
cgttctcaacctatgaaacgaatggatccgactttaaaccatgttttggtcgaagatacc
aatacctttatacgggttctgcaaacgcgagttaacaatgagttcgccaaactgaaggaa
gtagattttattaatacttactttgtagttaaccctttgcattcaatggacgctatatca
ctactggaatgcaagtttagtacagggcctgggaaaccacgtacaacgcagcatgtttcg
gtccaccagcggcaccgtttcaccagcgctacgtttctaagtgaacccattgaactatgc
ccgaccggttgtgttagaaaagacaacgagccgacagttctaatcaaaagagcaaacgaa
actcctgtaaatttcctgacagctttgagtggcagacctgaaaatttcatccgatttttg
aacaattttgaaaactcgtttttgacccgtggggaaaaggtgaaccttattgttacttac
tttccgcctgaatacgaggttgatattactactaattcgtctcaagagattgtggaggtg
gacggtatctcgcccaattttgggaaaaataccccactcggcccggacgctaaatttgtg
actgaaaacatgaacagattgcaaaacgcatatccagattcaaagattgccgtgatcaac
ctcgagcccggaacagaattttcgcggggactcgggctccaagtcgccgcgaaaagcgtg
gagtcccgcgatgaaattatattttttagcgacgtggatttggtgttcgctcccgagata
ctggaccacatacgcagaaacacaatacgacataaacaggtctactacccagtatttttc
agccagtatgacccggacgtggtatatgttgatatgccgaaaccacaaaactatttcatc
ttcagcgaattagctggattttggagacacttcagctacggaatggtttctttgtacgcg
agtgatttcgacaaaacaaacggttttgatctctcaatacacggttggggattagaagac
gtacacctggtaaatgcaattttagccgctggtctagatgtttttaaaagcacagagcct
ggacaagttcacatttttcacgacaaaacatgcgacagctccctcagcgaaaaccaacga
acgagttgccagaattctagggccgcacattacgccccttcgacattgttatactacttg
tggaaaactccagaaagtatcgagacaatagaagaagtttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (8)   
   KEGG ENZYME (2)   
   KEGG REACTION (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (130)   
   KEGG ORTHOLOGY (1)   
   RefGene (126)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (158)   

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