User profiles for Robert Kofler
Robert KoflerPI at Institute of Population Genetics Verified email at vetmeduni.ac.at Cited by 6599 |
Sequencing pools of individuals—mining genome-wide polymorphism data without big funding
The analysis of polymorphism data is becoming increasingly important as a complementary
tool to classical genetic analyses. Nevertheless, despite plunging sequencing costs, …
tool to classical genetic analyses. Nevertheless, despite plunging sequencing costs, …
Combining experimental evolution with next-generation sequencing: a powerful tool to study adaptation from standing genetic variation
Evolve and resequence (E&R) is a new approach to investigate the genomic responses to
selection during experimental evolution. By using whole genome sequencing of pools of …
selection during experimental evolution. By using whole genome sequencing of pools of …
PoPoolation: a toolbox for population genetic analysis of next generation sequencing data from pooled individuals
Recent statistical analyses suggest that sequencing of pooled samples provides a cost effective
approach to determine genome-wide population genetic parameters. Here we introduce …
approach to determine genome-wide population genetic parameters. Here we introduce …
Genetic redundancy fuels polygenic adaptation in Drosophila
The genetic architecture of adaptive traits is of key importance to predict evolutionary
responses. Most adaptive traits are polygenic—ie, result from selection on a large number of …
responses. Most adaptive traits are polygenic—ie, result from selection on a large number of …
Evolutionary genomics can improve prediction of species' responses to climate change
Global climate change (GCC) increasingly threatens biodiversity through the loss of species,
and the transformation of entire ecosystems. Many species are challenged by the pace of …
and the transformation of entire ecosystems. Many species are challenged by the pace of …
PoPoolation2: identifying differentiation between populations using sequencing of pooled DNA samples (Pool-Seq)
Sequencing pooled DNA samples (Pool-Seq) is the most cost-effective approach for the
genome-wide comparison of population samples. Here, we introduce PoPoolation2, the first …
genome-wide comparison of population samples. Here, we introduce PoPoolation2, the first …
Genome‐wide patterns of latitudinal differentiation among populations of Drosophila melanogaster from North America
Understanding the genetic underpinnings of adaptive change is a fundamental but largely
unresolved problem in evolutionary biology. D rosophila melanogaster, an ancestrally tropical …
unresolved problem in evolutionary biology. D rosophila melanogaster, an ancestrally tropical …
SciRoKo: a new tool for whole genome microsatellite search and investigation
R Kofler, C Schlötterer, T Lelley - Bioinformatics, 2007 - academic.oup.com
SciRoKo is a user-friendly software tool for the identification of microsatellites in genomic
sequences. The combination of an extremely fast search algorithm with a built-in summary …
sequences. The combination of an extremely fast search algorithm with a built-in summary …
Sequencing of Pooled DNA Samples (Pool-Seq) Uncovers Complex Dynamics of Transposable Element Insertions in Drosophila melanogaster
Transposable elements (TEs) are mobile genetic elements that parasitize genomes by semi-autonomously
increasing their own copy number within the host genome. While TEs are …
increasing their own copy number within the host genome. While TEs are …
The recent invasion of natural Drosophila simulans populations by the P-element
The P-element is one of the best understood eukaryotic transposable elements. It invaded
Drosophila melanogaster populations within a few decades but was thought to be absent from …
Drosophila melanogaster populations within a few decades but was thought to be absent from …