User profiles for Ivan Sovic

Ivan Sović, Ivan Sovic

Verified email at irb.hr
Cited by 7994

The complete sequence of a human genome

…, A Shumate, Y Sims, AFA Smit, DC Soto, I Sović… - Science, 2022 - science.org
Since its initial release in 2000, the human reference genome has covered only the
euchromatic fraction of the genome, leaving important heterochromatic regions unfinished. …

Fast and accurate de novo genome assembly from long uncorrected reads

R Vaser, I Sović, N Nagarajan, M Šikić - Genome research, 2017 - genome.cshlp.org
The assembly of long reads from Pacific Biosciences and Oxford Nanopore Technologies
typically requires resource-intensive error-correction and consensus-generation steps to …

Towards complete and error-free genome assemblies of all vertebrate species

…, A Misuraca, SB Kingan, R Hall, Z Kronenberg, I Sović… - Nature, 2021 - nature.com
High-quality and complete reference genome assemblies are fundamental for the application
of genomics to biology, disease, and biodiversity conservation. However, such assemblies …

Scalable distributed computing hierarchy: Cloud, fog and dew computing

K Skala, D Davidovic, E Afgan, I Sovic… - Open Journal of Cloud …, 2015 - ronpub.com
The paper considers the conceptual approach for organization of the vertical hierarchical
links between the scalable distributed computing paradigms: Cloud Computing, Fog …

Fast and sensitive mapping of nanopore sequencing reads with GraphMap

I Sović, M Šikić, A Wilm, SN Fenlon, S Chen… - Nature …, 2016 - nature.com
Realizing the democratic promise of nanopore sequencing requires the development of new
bioinformatics approaches to deal with its specific error characteristics. Here we present …

Chasing perfection: validation and polishing strategies for telomere-to-telomere genome assemblies

…, A Mikheenko, B Paten, A Shumate, DC Soto, I Sović… - Nature …, 2022 - nature.com
Advances in long-read sequencing technologies and genome assembly methods have enabled
the recent completion of the first telomere-to-telomere human genome assembly, which …

4D thermal imaging system for medical applications

K Skala, T Lipić, I Sović, L Gjenero, I Grubišić - Periodicum biologorum, 2011 - hrcak.srce.hr
The dissipation of thermal radiation can be observed using thermal infrared cameras which
generate images based on the amount of input radiation belonging to a small part of the …

Evaluation of hybrid and non-hybrid methods for de novo assembly of nanopore reads

I Sović, K Križanović, K Skala, M Šikić - Bioinformatics, 2016 - academic.oup.com
Motivation : Recent emergence of nanopore sequencing technology set a challenge for
established assembly methods. In this work, we assessed how existing hybrid and non-hybrid de …

Active 3D scanning based 3D thermography system and medical applications

I Grubišić, L Gjenero, T Lipić, I Sović… - 2011 Proceedings of …, 2011 - ieeexplore.ieee.org
Infrared (IR) thermography determines the surface temperature of an object or human body
using IR camera. It is an imaging technology which is contactless and completely non-…

Assembly and annotation of 2 high-quality columbid reference genomes from sequencing of a Columba livia × Columba guinea F1 hybrid

…, C Holt, GT Concepcion, I Sović… - G3: Genes …, 2024 - academic.oup.com
Pigeons and doves (family Columbidae) are one of the most diverse extant avian lineages,
and many species have served as key models for evolutionary genomics, developmental …