Xing Y - Search Results

1

rMATS: robust and flexible detection of differential alternative splicing from replicate RNA-Seq data.

Shen S, Park JW, Lu ZX, Lin L, Henry MD, Wu YN, Zhou Q, Xing Y. Shen S, et al. Among authors: xing y. Proc Natl Acad Sci U S A. 2014 Dec 23;111(51):E5593-601. doi: 10.1073/pnas.1419161111. Epub 2014 Dec 5. Proc Natl Acad Sci U S A. 2014. PMID: 25480548 Free PMC article.

2

ASAP: the Alternative Splicing Annotation Project.

Lee C, Atanelov L, Modrek B, Xing Y. Lee C, et al. Among authors: xing y. Nucleic Acids Res. 2003 Jan 1;31(1):101-5. doi: 10.1093/nar/gkg029. Nucleic Acids Res. 2003. PMID: 12519958 Free PMC article.

3

Novel functions of the phosphatidylinositol metabolic pathway discovered by a chemical genomics screen with wortmannin.

Zewail A, Xie MW, Xing Y, Lin L, Zhang PF, Zou W, Saxe JP, Huang J. Zewail A, et al. Among authors: xing y. Proc Natl Acad Sci U S A. 2003 Mar 18;100(6):3345-50. doi: 10.1073/pnas.0530118100. Epub 2003 Mar 3. Proc Natl Acad Sci U S A. 2003. PMID: 12615994 Free PMC article.

4

Evidence of functional selection pressure for alternative splicing events that accelerate evolution of protein subsequences.

Xing Y, Lee C. Xing Y, et al. Proc Natl Acad Sci U S A. 2005 Sep 20;102(38):13526-31. doi: 10.1073/pnas.0501213102. Epub 2005 Sep 12. Proc Natl Acad Sci U S A. 2005. PMID: 16157889 Free PMC article.

5

An expectation-maximization algorithm for probabilistic reconstructions of full-length isoforms from splice graphs.

Xing Y, Yu T, Wu YN, Roy M, Kim J, Lee C. Xing Y, et al. Nucleic Acids Res. 2006 Jun 6;34(10):3150-60. doi: 10.1093/nar/gkl396. Print 2006. Nucleic Acids Res. 2006. PMID: 16757580 Free PMC article.

6

Alternative splicing and RNA selection pressure--evolutionary consequences for eukaryotic genomes.

Xing Y, Lee C. Xing Y, et al. Nat Rev Genet. 2006 Jul;7(7):499-509. doi: 10.1038/nrg1896. Epub 2006 Jun 13. Nat Rev Genet. 2006. PMID: 16770337 Review.

7

MADS: a new and improved method for analysis of differential alternative splicing by exon-tiling microarrays.

Xing Y, Stoilov P, Kapur K, Han A, Jiang H, Shen S, Black DL, Wong WH. Xing Y, et al. RNA. 2008 Aug;14(8):1470-9. doi: 10.1261/rna.1070208. Epub 2008 Jun 19. RNA. 2008. PMID: 18566192 Free PMC article.

8

Diverse splicing patterns of exonized Alu elements in human tissues.

Lin L, Shen S, Tye A, Cai JJ, Jiang P, Davidson BL, Xing Y. Lin L, et al. Among authors: xing y. PLoS Genet. 2008 Oct 17;4(10):e1000225. doi: 10.1371/journal.pgen.1000225. PLoS Genet. 2008. PMID: 18841251 Free PMC article.

9

Nonallele-specific silencing of mutant and wild-type huntingtin demonstrates therapeutic efficacy in Huntington's disease mice.

Boudreau RL, McBride JL, Martins I, Shen S, Xing Y, Carter BJ, Davidson BL. Boudreau RL, et al. Among authors: xing y. Mol Ther. 2009 Jun;17(6):1053-63. doi: 10.1038/mt.2009.17. Epub 2009 Feb 24. Mol Ther. 2009. PMID: 19240687 Free PMC article.

10

Large-scale analysis of exonized mammalian-wide interspersed repeats in primate genomes.

Lin L, Jiang P, Shen S, Sato S, Davidson BL, Xing Y. Lin L, et al. Among authors: xing y. Hum Mol Genet. 2009 Jun 15;18(12):2204-14. doi: 10.1093/hmg/ddp152. Epub 2009 Mar 26. Hum Mol Genet. 2009. PMID: 19324900 Free PMC article.

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