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NOTCH1 directly regulates c-MYC and activates a feed-forward-loop transcriptional network promoting leukemic cell growth.
Palomero T, Lim WK, Odom DT, Sulis ML, Real PJ, Margolin A, Barnes KC, O'Neil J, Neuberg D, Weng AP, Aster JC, Sigaux F, Soulier J, Look AT, Young RA, Califano A, Ferrando AA. Palomero T, et al. Among authors: califano a. Proc Natl Acad Sci U S A. 2006 Nov 28;103(48):18261-6. doi: 10.1073/pnas.0606108103. Epub 2006 Nov 17. Proc Natl Acad Sci U S A. 2006. PMID: 17114293 Free PMC article.
Transcriptional analysis of the B cell germinal center reaction.
Klein U, Tu Y, Stolovitzky GA, Keller JL, Haddad J Jr, Miljkovic V, Cattoretti G, Califano A, Dalla-Favera R. Klein U, et al. Among authors: califano a. Proc Natl Acad Sci U S A. 2003 Mar 4;100(5):2639-44. doi: 10.1073/pnas.0437996100. Epub 2003 Feb 25. Proc Natl Acad Sci U S A. 2003. PMID: 12604779 Free PMC article.
Gene expression dynamics during germinal center transit in B cells.
Klein U, Tu Y, Stolovitzky GA, Keller JL, Haddad J Jr, Miljkovic V, Cattoretti G, Califano A, Dalla-Favera R. Klein U, et al. Among authors: califano a. Ann N Y Acad Sci. 2003 Apr;987:166-72. doi: 10.1111/j.1749-6632.2003.tb06045.x. Ann N Y Acad Sci. 2003. PMID: 12727636 Review.
Reverse engineering of regulatory networks in human B cells.
Basso K, Margolin AA, Stolovitzky G, Klein U, Dalla-Favera R, Califano A. Basso K, et al. Among authors: califano a. Nat Genet. 2005 Apr;37(4):382-90. doi: 10.1038/ng1532. Epub 2005 Mar 20. Nat Genet. 2005. PMID: 15778709
Reverse engineering cellular networks.
Margolin AA, Wang K, Lim WK, Kustagi M, Nemenman I, Califano A. Margolin AA, et al. Among authors: califano a. Nat Protoc. 2006;1(2):662-71. doi: 10.1038/nprot.2006.106. Nat Protoc. 2006. PMID: 17406294
360 results