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WO2005079791A1 - Thiophene -2- carboxylic acid - (1h - benzimidazol - 2 yl) - amide derivatives and related compounds as inhibitors of the tec kinase itk (interleukin -2- inducible t cell kinase) for the treatment of inflammation, immunological and allergic disorders - Google Patents

Thiophene -2- carboxylic acid - (1h - benzimidazol - 2 yl) - amide derivatives and related compounds as inhibitors of the tec kinase itk (interleukin -2- inducible t cell kinase) for the treatment of inflammation, immunological and allergic disorders Download PDF

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Publication number
WO2005079791A1
WO2005079791A1 PCT/US2005/004183 US2005004183W WO2005079791A1 WO 2005079791 A1 WO2005079791 A1 WO 2005079791A1 US 2005004183 W US2005004183 W US 2005004183W WO 2005079791 A1 WO2005079791 A1 WO 2005079791A1
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WIPO (PCT)
Prior art keywords
alkyl
methyl
chosen
amino
phenyl
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PCT/US2005/004183
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French (fr)
Inventor
Joerg Martin Bentzien
Brian Nicholas Cook
Xiang Li
Ho Yin Lo
Chuk Chui Man
Ingo Andreas Mugge
Steven S. Pullen
Gregory Paul Roth
Fariba Soleymanzadeh
Hidenori Takahashi
Ji Wang
Andre White
Renee M. Zindell
Doris Edith Riether
Peter Allen Nemoto
Xin Yao
John Edward Mangette
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Boehringer Ingelheim Pharmaceuticals, Inc.
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Publication of WO2005079791A1 publication Critical patent/WO2005079791A1/en

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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D235/00Heterocyclic compounds containing 1,3-diazole or hydrogenated 1,3-diazole rings, condensed with other rings
    • C07D235/02Heterocyclic compounds containing 1,3-diazole or hydrogenated 1,3-diazole rings, condensed with other rings condensed with carbocyclic rings or ring systems
    • C07D235/04Benzimidazoles; Hydrogenated benzimidazoles
    • C07D235/24Benzimidazoles; Hydrogenated benzimidazoles with hetero atoms or with carbon atoms having three bonds to hetero atoms with at the most one bond to halogen, e.g. ester or nitrile radicals, directly attached in position 2
    • C07D235/30Nitrogen atoms not forming part of a nitro radical
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P37/00Drugs for immunological or allergic disorders
    • A61P37/02Immunomodulators
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P37/00Drugs for immunological or allergic disorders
    • A61P37/08Antiallergic agents
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D401/00Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, at least one ring being a six-membered ring with only one nitrogen atom
    • C07D401/14Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, at least one ring being a six-membered ring with only one nitrogen atom containing three or more hetero rings
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D409/00Heterocyclic compounds containing two or more hetero rings, at least one ring having sulfur atoms as the only ring hetero atoms
    • C07D409/02Heterocyclic compounds containing two or more hetero rings, at least one ring having sulfur atoms as the only ring hetero atoms containing two hetero rings
    • C07D409/12Heterocyclic compounds containing two or more hetero rings, at least one ring having sulfur atoms as the only ring hetero atoms containing two hetero rings linked by a chain containing hetero atoms as chain links
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D409/00Heterocyclic compounds containing two or more hetero rings, at least one ring having sulfur atoms as the only ring hetero atoms
    • C07D409/14Heterocyclic compounds containing two or more hetero rings, at least one ring having sulfur atoms as the only ring hetero atoms containing three or more hetero rings
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D413/00Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and oxygen atoms as the only ring hetero atoms
    • C07D413/02Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and oxygen atoms as the only ring hetero atoms containing two hetero rings
    • C07D413/12Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and oxygen atoms as the only ring hetero atoms containing two hetero rings linked by a chain containing hetero atoms as chain links
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D413/00Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and oxygen atoms as the only ring hetero atoms
    • C07D413/14Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and oxygen atoms as the only ring hetero atoms containing three or more hetero rings
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D417/00Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and sulfur atoms as the only ring hetero atoms, not provided for by group C07D415/00
    • C07D417/14Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and sulfur atoms as the only ring hetero atoms, not provided for by group C07D415/00 containing three or more hetero rings
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D491/00Heterocyclic compounds containing in the condensed ring system both one or more rings having oxygen atoms as the only ring hetero atoms and one or more rings having nitrogen atoms as the only ring hetero atoms, not provided for by groups C07D451/00 - C07D459/00, C07D463/00, C07D477/00 or C07D489/00
    • C07D491/02Heterocyclic compounds containing in the condensed ring system both one or more rings having oxygen atoms as the only ring hetero atoms and one or more rings having nitrogen atoms as the only ring hetero atoms, not provided for by groups C07D451/00 - C07D459/00, C07D463/00, C07D477/00 or C07D489/00 in which the condensed system contains two hetero rings
    • C07D491/10Spiro-condensed systems

Definitions

  • Ari, Ar 2 , Ri, R 2 , R 3 , R4 and X a are defined herein below.
  • the compounds of the invention inhibit Itk kinase and are therefore useful for treating diseases and pathological conditions involving inflammation, immunological disorders and allergic disorders.
  • This invention also relates to processes for preparing these compounds and to pharmaceutical compositions comprising these compounds.
  • Protein kinases play a critical role in mediating signaling events leading to cellular responses such as activation, growth and differentiation, in response to extracellular signals. Protein kinases transmit their signal by phosphorylating specific residues in a target protein. Protein kinases that specifically phosphorylate tyrosine residues are referred to as protein tyrosine kinases. Protein tyrosine kinases can be divided into two general groups: receptor such as epidermal growth factor (EGF) receptor (S. Iwashita and M. Kobayashi, 1992, Cellular Signalling, 4, 123-132) and cytosolic non-receptor (C. Chan et al., 1994, Ann. Rev. Immunol., 12, 555-592).
  • EGF epidermal growth factor
  • Interleukin-2-inducible T cell kinase also referred to as T cell-specific kinase (Tsk) and expressed mainly in T-lymphocytes (EMT)
  • Tsk T cell-specific kinase
  • EMT T-lymphocytes
  • Tec family members are characterized by the presence of a pleckstrin-homology domain (PH), a proline rich Tec homology domain (TH) and Src homology SH3, SH2 and SHI kinase domains positioned from the N-terminus to the C-terminus respectively (S. Gibson et al., 1993, Blood, 82,1561-1572; J.
  • T cells T cells
  • TCR T cell receptor
  • IgE receptor IgE receptor
  • Lck a src tyrosine kinase family member
  • Y511 in the kinase domain activation loop of Itk
  • Zap-70 is required for phosphorylation and activation of PLC- ⁇ (S. C. Bunnell et al., 2000, J. Biol. Chem., 275, 2219-2230).
  • PLC- ⁇ catalyzes the formation of inositol 1,4,5- triphosphate and diacylglycerol, leading to calcium mobilization and PKC activation, respectively. These events activate numerous downstream pathways and lead ultimately to degranulation (mast cells) and cytokine gene expression (T cells) (Y. Kawakami et al., 1999, J. Leukocyte Biol., 65, 286-290).
  • CD4 + T cells from Itk knockout mice have a diminished proliferative response in a mixed lymphocyte reaction or upon Con A or anti-CD3 stimulation.
  • T cells from Itk knockout mice produced little IL-2 upon TCR stimulation resulting in reduced proliferation of these cells.
  • Itk deficient CD4 + T cells produced reduced levels of cytokines including IL-4, IL-5 and IL- 13 upon stimulation of the TCR, even after priming with inducing conditions. (D.J. Fowell, 1999, Immunity, 11, 399-409).
  • T cells play an important role in regulating the immune response (Powrie and Coffman, 1993, Immunology Today, 14, 270-274). Indeed, activation of T cells is often the initiating event in immunological disorders. Following activation of the TCR, there is an influx of calcium that is required for T cell activation. Upon activation, T cells produce cytokines, including IL-2,4, 5, 9, 10, and 13 leading to T cell proliferation, differentiation, and effector function. Clinical studies with inhibitors of IL-2 have shown that interference with T cell activation and proliferation effectively suppresses immune response in vivo (Waldmann, 1993, Immunology Today, 14, 264- 270). Accordingly, agents that inhibit T lymphocyte activation and subsequent cytokine production, are therapeutically useful for selectively suppressing the immune response in a patient in need of such immunosuppression.
  • Ar ls Ar 2 , Ri, R 2 , R 3 , R 4 and X a are defined herein below.
  • Ri is hydrogen or alkyl
  • R 2 covalently attached at the indicated 4-, 5-, 6- or 7-position of the formula (I), is chosen from hydrogen, alkyl, alkoxy and halogen;
  • Ari is chosen from carbocycle and heteroaryl each optionally substituted with one or more amine, alkyl, alkoxy or halogen;
  • Ar 2 is chosen from carbocycle, heterocycle and heteroaryl each optionally substituted with one or more R a ;
  • R 3 is Ci-io alkyl chain branched or unbranched optionally substituted with one or more
  • R b is the group:
  • R ⁇ is independently chosen from hydrogen, hydroxy, alkyl, alkoxy, alkylthio, arylCo-5 alkyl, aryloxyCo-5 alkyl, heteroarylCo-s alkyl, cycloalkylCo-s alkyl, heterocyclylCo -5 alkyl and amino said amino is optionally mono-or di-substituted by acyl, alkyl, alkoxycarbonyl, cycloalkylCo- 5 alkyl, arylCo -5 alkyl, heteroarylCo-5 alkyl or heterocyclylCo -5 alkyl; n is 1 - 10
  • a hydrogen atom from their respective -(CH 2 )- group(s) may be replaced with a alkyl wherein one or more -CH 2 - groups of said alkyl are optionally replaced by a heteroatom group chosen from O, S and NH,
  • Rj is covalently attached at the indicated 5- or 6- position of the formula (I), p, q, t and z are each independently chosen from 0,1 or 2;
  • R 5 is chosen from arylCo-5 alkyl, alkyl, heteroarylCo- 5 alkyl, cycloalkylCo- 5 alkyl and heterocyclylCo -5 alkyl, each R 5 optionally substituted with one or more R c ;
  • R 7 is hydrogen, alkenyl or alkyl
  • R 5 and R 7 together with the nitrogen atom to which they are attached form: a 4-7 -membered monocyclic ring or an 8-14-membered bicyclic ring, wherein each monocyclic or bicyclic ring optionally contains an additional 1 to 3 heteroatoms chosen from N, O and S and each ring is aromatic or nonaromatic, and wherein each monocyclic or bicyclic ring is optionally substituted by one or more R c ; each R a , Rb or R c are independently chosen from hydrogen, alkyl, alkenyl, alkynyl, cycloalkyl, cycloalkenyl, aryl, arylalkyl, aryloxy, alkoxy, alkylthio, acyl, alkoxycarbonyl, acyloxy, acylamino, sulphonylamino, aminosulfonyl, alkylsulfonyl, carboxy, carboxamide, oxo, hydroxy,
  • X a and X b are oxygen or sulfur; or the pharmaceutically acceptable salts, esters, acids, isomers or tautomers thereof.
  • R 2 is chosen from hydrogen, C ⁇ -3 alkyl, C ⁇ -3 alkoxy and halogen;
  • An is phenyl or heteroaryl chosen from thienyl, furanyl, isoxazolyl, oxazolyl, thiazolyl, oxadiazolyl, thiadiazolyl, tetrazolyl, pyrazolyl, pyrrolyl, imidazolyl, pyridinyl, pyrimidinyl, pyrazinyl, pyridazinyl and pyranyl;
  • Ar 2 is chosen from C 3 . 8 cycloalkyl, C 4-8 cycloalkenyl, phenyl, naphthyl and heteroaryl chosen from thienyl, furanyl, isoxazolyl, oxazolyl, thiazolyl, thiadiazolyl, tetrazolyl, pyrazolyl, pyrrolyl, imidazolyl, pyridinyl, pyrimidinyl, pyrazinyl, pyridazinyl, pyranyl, quinoxalinyl, indolyl, benzimidazolyl, benzoxazolyl, benzothiazolyl, benzothiophenyl, benzodioxolyl, quinolinyl, quinazolinyl and indazolyl each is optionally substituted with one or more R a ; R3 is Ci-io alkyl chain branched or unbranched optionally substituted with one or
  • heterocyclylCo- 5 alkyl and amino said amino is optionally mono-or di-substituted by C ⁇ -5 acyl, C 1-5 alkyl, C 1-5 alkoxycarbonyl, arylCo-5 alkyl, heteroarylC 0-5 alkyl or heterocyclylCo- 5 alkyl; and wherein each recited heteroaryl in this paragraph is chosen from thienyl, furanyl, isoxazolyl, oxazolyl, thiazolyl, thiadiazolyl, tetrazolyl, pyrazolyl, pyrrolyl, imidazolyl, pyridinyl, pyrimidinyl, pyrazinyl, pyridazinyl and pyranyl and wherein each recited heterocyclyl in this paragraph is chosen from pyrrolidinyl, morpholinyl, thiomorpholinyl, dioxalanyl, piperidinyl and piperaz
  • Rj is a group chosen from:
  • R5 is chosen from phenyl, naphthyl, benzyl, phenethyl, C 1 - 5 alkyl, heteroarylCo-s alkyl wherein the heteroaryl is chosen from thienyl, furanyl, isoxazolyl, oxazolyl, thiazolyl, thiadiazolyl, tetrazolyl, pyrazolyl, pyrrolyl, imidazolyl, pyridinyl, pyrimidinyl, pyrazinyl, pyridazinyl and pyranyl, C 3-7 cycloalkylCo -5 alkyl and heterocyclylCo-5 alkyl wherein the heterocyclyl is chosen from aziridinyl, pyrrolidinyl, morpholinyl, thiomorpholinyl, tetrahydrofuranyl, dioxalanyl, piperidinyl and piperazinyl, each R5 is optionally substituted with
  • R 7 is hydrogen, C 3 . ⁇ o alkenyl or C ⁇ s alkyl
  • X a is oxygen
  • R 2 is chosen from hydrogen and C 1 . 3 alkyl
  • Ari is chosen from phenyl, thienyl, furanyl, isoxazolyl, oxazolyl, imidazolyl, oxadiazolyl, thiadiazolyl, pyrazolyl and pyridinyl;
  • Ar 2 is chosen from C 4-8 cycloalkenyl, C 4-8 cycloalkyl, phenyl, naphthyl, benzothiophenyl, benzodioxolyl, quinolinyl, indolyl, thiazolyl, thienyl, furanyl, isoxazolyl, oxazolyl, imidazolyl, thiadiazolyl, pyrazolyl, pyrazinyl and pyridinyl each is optionally substituted with one or more R a ;
  • Re is independently chosen from hydroxy, C ⁇ - 5 alkyl, C 1 .5 alkoxy, phenyl, benzyl, phenethyl, heteroarylCo -5 alkyl, heterocycrylCo -5 alkyl, C 3-7 cycloalkyl and amino said amino is optionally mono-or di-substituted by C 1 . 5 acyl, C ⁇ - 5 alkyl, C 1 .
  • R 5 is chosen from phenyl, naphthyl, benzyl, phenethyl, C 1-5 alkyl, heteroarylC 0-5 alkyl wherein the heteroaryl in this paragraph is chosen from thienyl, furanyl, imidazolyl and pyridinyl, C 3-7 cycloalkylC 0-5 alkyl and heterocyclylCo-s alkyl wherein the heterocyclyl is chosen from aziridinyl, pyrrolidinyl, tetrahydrofuranyl, tetrahydropyridinyl, morpholinyl, thiomorpholinyl, piperidinyl and piperazinyl, each R 5 is optionally substituted with one or more R c ;
  • R 7 is hydrogen, propenyl or C 1-3 alkyl.
  • R 2 is chosen from hydrogen and methyl
  • Ar 2 is chosen from cyclopentyl, cyclohexyl, cycloheptyl, cyclopentenyl, cyclohexenyl, cycloheptenyl,phenyl, naphthyl, benzothiophenyl, benzodioxolyl, quinolinyl, indolyl, thiazolyl, thienyl, furanyl, isoxazolyl, oxazolyl, imidazolyl, thiadiazolyl, oxadiazolyl, pyrazinyl and pyridinyl each is optionally substituted with one or more R a ;
  • Rs is: -(CH 2 ) compassion-C(O)-R 6 or wherein Rg is independently chosen from hydroxy, C 1-5 alkyl, C ⁇ -5 alkoxy, phenyl, morpholinylCo- 5 alkyl, piperazinylCo -5 alkyl, imidazolylCo-5 alkyl, pyrrolidinylC 0-5 alkyl, pyrrolidinonylC 0-5 alkyl, thienylC 0-5 alkyl, C 3-7 cycloalkyl and amino said amino is optionally mono-or di-substituted by C ⁇ -5 alkyl or Ci- 5 alkoxycarbonyl;
  • R 5 is chosen from phenyl, furanyl, benzyl, phenethyl, C 1-3 alkyl and C . 7 cycloalkylC 0-5 alkyl each optionally substituted with one or more R c ;
  • each R a , Rb or Rc are independently chosen from C 1-5 alkyl, C 2 . 5 alkenyl, C 3-8 cycloalkyl, C 4 . 8 cycloalkenyl, phenyl, C 1-5 alkoxy, C ⁇ _ 5 alkylthio, amino optionally mono-or-di- substituted by C ⁇ -5 alkyl, C ⁇ -5 alkoxycarbonyl, carboxamide, hydroxy, halogen, trifluoromethyl, nitro and nitrile, wherein any of the above R a , R b or R c are optionally halogenated where possible;
  • R 7 is C ⁇ -3 alkyl.
  • R 2 is hydrogen
  • Ari is chosen from phenyl, thienyl, furanyl, isoxazolyl and pyridinyl;
  • Ar 2 is chosen from cycloheptyl, cycloheptenyl, phenyl, naphthyl, benzothiophenyl, benzodioxolyl, quinolinyl, indolyl, thiazolyl, thienyl, furanyl, isoxazolyl, oxazolyl, thiadiazolyl, pyrazinyl and pyridinyl each is optionally substituted with one or more R a ;
  • R c is chosen from methyl, CF 3 , cyclopentyl, phenyl and cyclohexyl each optionally substituted with one or more R c ;
  • n 2-5.
  • Ari is chosen from phenyl, thien-2-yl, isoxazol-5-yl and pyridin-3-yl;
  • R a is chosen from phenyl, C 6-8 cycloalkyl, C 6 . 8 cycloalkenyl, C ⁇ -3 alkoxy, C ⁇ -4 alkyl, C 2-3 alkenyl, C ⁇ -3 alkylthio, amino, carboxamide, fluoro, chloro, nitro and nitrile;
  • R 4 is chosen from:
  • Re is independently chosen from hydroxy, methyl, ethyl, C ⁇ -3 alkoxy, phenyl, morpholinyl, piperazinyl, imidazolyl, pyrrolidinyl, pyrrolidinonyl, thienylCo- 5 alkyl, C 3-7 cycloalkyl and amino said amino is optionally mono-or di-substituted by C 1 - 5 alkyl or C 1-5 alkoxycarbonyl;
  • each R b or R c are independently chosen from C 1-3 alkoxy, amino optionally mono-or-di- substituted by C ⁇ -3 alkyl, carboxamide, hydroxy, fluoro, chloro, bromo, trifluoromethyl, nitro and nitrile.
  • Ar 2 is chosen from cycloheptyl, cycloheptenyl, phenyl, naphthyl, benzothiophenyl, benzodioxolyl, quinolinyl, indolyl, thiazolyl, thienyl, furanyl, isoxazolyl, oxazolyl, thiadiazolyl, pyrazinyl and pyridinyl each is optionally substituted with one or more R a chosen from phenyl, C 6-8 cycloalkyl, C 6-8 cycloalkenyl, C 1-3 alkoxy, C ⁇ -4 alkyl, C 2-3 alkenyl, C ⁇ -3 alkylthio, amino, carboxamide, fluoro, chloro, nitro and nitrile;
  • Re is independently chosen from hydroxy, methyl, ethyl, C ⁇ -3 alkoxy, phenyl, morpholinyl, piperazinyl, imidazolyl, pyrrolidinyl, pyrrolidinonyl, thienylCo -5 alkyl, C 3-7 cycloalkyl and amino said amino is optionally mono-or di-substituted by C ⁇ -5 alkyl or C 1-5 alkoxycarbonyl;
  • R c is chosen from methyl, CF 3 , cyclopentyl, phenyl and cyclohexyl each optionally substituted with one or more R c chosen from C ⁇ -3 alkoxy, amino optionally mono-or-di- substituted by C 1-3 alkyl, carboxamide, hydroxy, fluoro, chloro, bromo, trifluoromethyl, nitro and nitrile and
  • R is C 1 . 3 alkyl.
  • Ar 2 is chosen from phenyl, indolyl, thiazolyl, tliienyl, furanyl, isoxazolyl, oxazolyl, thiadiazolyl, pyrazinyl and pyridinyl each is optionally substituted with one or more R a chosen from phenyl, C 6-8 cycloalkyl, C 6 - 8 cycloalkenyl, C ⁇ -3 alkoxy, C ⁇ -4 alkyl, C 2-3 alkenyl, C 1 -3 alkylthio, amino, carboxamide, fluoro, chloro, nitro and nitrile.
  • Ar 2 is chosen from
  • each is optionally substituted with one R a chosen from phenyl, C ⁇ -3 alkoxy, C 1-4 alkyl, C 2- 3 alkenyl, C 1-3 alkylthio, amino, carboxamide, fluoro, chloro, nitro and nitrile;
  • R a must be -NO 2 , -NH 2 or -CN.
  • 5-Oxazol-5-yl-thiophene-2-carboxylic acid [5- (benzoyl-methyl-amino)- l-(2R-hy droxyl-2- phenyl-ethyl)- 1 H-benzoimidazol-2-yl] -amide
  • 5-Oxazol-5-yl-thiophene-2-carboxylic acid [5- (3 -cyanobenzoyl-methyl-amino)- 1 -(2R- hydroxyl-2-phenyl-ethyl)-lH-benzoimidazol-2- yl]-amide
  • Morpholine-4-carboxylic acid (l-(2-hydroxy- 2-methyl-propyl)-2- ⁇ [5-(2-methyl-oxazol-5- yl)-thiophene-2-carbonyl]-amino ⁇ -lH- benzoimidazol-5-yl)-methyl-amide
  • 5-Oxazol-5-yl-thiophene-2-carboxylic acid [5 -(benzoyl-methyl-amino)- 1 -benzyl- 1 H- benzoimidazol-2-yl] -amide
  • 5-Oxazol-5-yl-thiophene-2-carboxylic acid [5-[methyl-(2,2,2-trifluoro-acetyl)-amino]- 1 -(2-pyridin-3 -yl-ethyl)- 1 H-benzoimidazol- 2-yl] -amide
  • 5-Oxazol-5-yl-thiophene-2-carboxylic acid [5-methylamino-l-(2-pyridin-3-yl-ethyl)- 1 H-benzoimidazol-2-yl] -amide
  • 5-Oxazol-5-yl-thiophene-2-carboxylic acid [5-(3 -tert-butyl- 1 -methyl-ureido)- 1 -(2- pyridin-3 -yl-ethyl)- 1 H-benzoimidazol-2- yl] -amide 5-Oxazol-5-yl-thiophene-2-carboxylic acid CH, // [5 -(3 -cyclopentyl- 1 -methyl-ureido)- 1 -(2-
  • the invention includes the use of any compounds described above containing one or more asymmetric carbon atoms which may occur as racemates and racemic mixtures, single enantiomers, diastereomeric mixtures and individual diastereomers. All such isomeric forms of these compounds are expressly included in the present invention.
  • Each stereogenic carbon may be in the R or S configuration, or a combination of configurations.
  • the invention also relates to the use of a compound of formula (I), wherein Ari, Ar 2 , Ri, R 2 , R 3 , R 4 and X a have the meaning indicated, for preparing a pharmaceutical composition for the treatment and/or prevention of a Tec kinase mediated disease or condition..
  • the invention also relates to pharmaceutical preparations, containing as active substance one or more compounds of formula (I), wherein Ari, Ar 2 , Ri, R 2 , 3 > 4 and X a have the meanings indicated, or the pharmaceutically acceptable derivatives thereof, optionally combined with conventional excipients and/or carriers.
  • Compounds of the invention also include their isotopically-labelled forms.
  • An isotopically-labelled form of an active agent of a combination of the present invention is identical to said active agent but for the fact that one or more atoms of said active agent have been replaced by an atom or atoms having an atomic mass or mass number different from the atomic mass or mass number of said atom which is usually found in nature.
  • isotopes which are readily available commercially and which can be incorporated into an active agent of a combination of the present invention in accordance with well established procedures, include isotopes of hydrogen, carbon, nitrogen, oxygen, phosphorous, fluorine and chlorine, e.g., 2 H, 3 H, 13 C, 14 C, 15 N, 18 0, 17 0, 31 P, 32 P, 35 S, 18 F, and 36 C1, respectively.
  • An active agent of a combination of the present invention, a prodrug thereof, or a pharmaceutically acceptable salt of either which contains one or more of the above-mentioned isotopes and/or other isotopes of other atoms is contemplated to be within the scope of the present invention.
  • Some of the compounds of formula (I) can exist in more than one tautomeric form.
  • the invention includes methods using all such tautomers.
  • Alkyl, alkenyl, alkynyl, alkoxy, alkylthio, acyl, alkoxycarbonyl, acyloxy, acylamino, alkylsulfonyl and all other alkyl containing groups shall be understood unless otherwise specified as being Cl-10, branched or unbranched where structurally possible, and optionally partially or fully halogenated.
  • n is an integer 1,2,3 etc
  • BOC or t-BOC is tertiary-butoxycarbonyl.
  • t-Bu is tertiary-butyl.
  • DMF is dimethylformamide
  • EtOAc is ethyl acetate.
  • EtOH and MeOH are ethanol and methanol, respectively.
  • TFA is trifluoroacetic acid.
  • THF is tetrahydrofuran.
  • DMSO dimethylsulfoxide
  • TBTU is O-(lH-benzotriazol-l-yl)-N,N.N',N'-tetramethyluronium tetrafluoroborate.
  • FMOC is 9-fluorenylmethoxycarbonyl.
  • Carbocycle shall be understood to mean an aliphatic hydrocarbon radical containing from three to twelve carbon atoms. Carbocycles include hydrocarbon rings containing from three to ten carbon atoms. These carbocycles may be either aromatic and non-aromatic ring systems, and optionally or fully halogenated. The non-aromatic ring systems may be mono- or polyunsaturated.
  • Preferred carbocycles include but are not limited to cyclopropyl, cyclobutyl, cyclopentyl, cyclopentenyl, cyclohexyl, cyclohexenyl, cycloheptanyl, cycloheptenyl, phenyl, indanyl, indenyl, benzocyclobutanyl, dihydronaphthyl, tetrahydronaphthyl, naphthyl, decahydronaphthyl, benzocycloheptanyl and benzocycloheptenyl. Certain terms for cycloalkyl such as cyclobutanyl and cyclobutyl shall be used interchangeably.
  • heterocycle refers to a stable nonaromatic 4-8 membered (but preferably, 5 or 6 membered) monocyclic or nonaromatic 8-11 membered bicyclic heterocycle radical which may be either saturated or unsaturated.
  • Each heterocycle consists of carbon atoms and one or more, preferably from 1 to 4 heteroatoms selected from nitrogen, oxygen and sulfur.
  • the heterocycle may be attached by any atom of the cycle, which results in the creation of a stable structure.
  • heterocycles include but are not limited to, pyrrolidinyl, morpholinyl, thiomorpholinyl, dioxalanyl, piperidinyl, piperazinyl, aziridinyl and tetrahydrofuranyl.
  • heteroaryl shall be understood to mean an aromatic 5-8 membered monocyclic or 8-11 membered bicyclic ring containing 1-4 heteroatoms such as N,O and S. Unless otherwise stated, such heteroaryls include but are not limited to thienyl, furanyl, isoxazolyl, oxazolyl, thiazolyl, thiadiazolyl, tetrazolyl, pyrazolyl, pyrrolyl, imidazolyl, pyridinyl, pyrimidinyl, pyrazinyl, pyridazinyl, pyranyl, quinoxalinyl, indolyl, benzimidazolyl, benzoxazolyl, benzothiazolyl, benzothienyl, quinolinyl, quinazolinyl and indazolyl.
  • heteroatom as used herein shall be understood to mean atoms other than carbon such as O, N, S and P.
  • aryl as used herein shall be understood to mean aromatic carbocycle or heteroaryl as defined herein.
  • Each aryl or heteroaryl unless otherwise specified includes its partially or fully hydrogenated derivative.
  • quinolinyl may include decahydroquinolinyl and tetrahydroquinolinyl
  • naphthyl may include its hydrogenated derivatives such as tetrahydranaphthyl.
  • Each may be partially or fully halogenated.
  • Other partially or fully hydrogenated derivatives of the aryl and heteroaryl compounds described herein will be apparent to one of ordinary skill in the art.
  • cyclic moieties such as aryloxy or heteroaryl amine shall be understood to mean an aryl, heteroaryl, heterocycle as defined above attached to it's respective functional group.
  • nitrogen and “sulfur” include any oxidized form of nitrogen and sulfur and the quatemized form of any basic nitrogen.
  • alkylthio radical such as -S-C ⁇ -6 alkyl, unless otherwise specified, this shall be understood to include -S(O)-C 1 . 6 alkyl and -S(O) 2 -C 1 . 6 alkyl.
  • halogen as used in the present specification shall be understood to mean bromine, chlorine, fluorine or iodine.
  • a non-limiting example would be a halogenated alkyl such as -CH 2 CHF 2 , -CF 3 etc.
  • the compounds of the invention are only those which are contemplated to be 'chemically stable' as will be appreciated by those skilled in the art.
  • a compound which would have a 'dangling valency', or a 'carbanion' are not compounds contemplated by the inventive methods disclosed herein.
  • patient refers to a warm-blooded mammal and preferably, a human.
  • the invention includes pharmaceutically acceptable derivatives of compounds of formula (I).
  • a "pharmaceutically acceptable derivative” refers to any pharmaceutically acceptable salt or ester, or any other compound which, upon administration to a patient, is capable of providing (directly or indirectly) a compound useful for the invention, or a pharmacologically active metabolite or pharmacologically active residue thereof.
  • a pharmacologically active metabolite shall be understood to mean any compound of the invention capable of being metabolized enzymatically or chemically. This includes, for example, hydroxylated or oxidized derivative compounds of the formula (I).
  • Pharmaceutically acceptable salts include those derived from pharmaceutically acceptable inorganic and organic acids and bases.
  • suitable acids include hydrochloric, hydrobromic, sulfuric, nitric, perchloric, fumaric, maleic, phosphoric, glycolic, lactic, salicylic, succinic, toluene-p-sulforic, tartaric, acetic, citric, methanesulfonic, formic, benzoic, malonic, naphthalene-2-sulfuric and benzenesulfonic acids.
  • Other acids such as oxalic acid, while not themselves pharmaceutically acceptable, may be employed in the preparation of salts useful as intermediates in obtaining the compounds and their pharmaceutically acceptable acid addition salts.
  • Salts derived from appropriate bases include alkali metal (e.g., sodium), alkaline earth metal
  • prodrugs of compounds of the formula (I) include those compounds that, upon simple chemical transformation, are modified to produce compounds of the invention. Simple chemical transformations include hydrolysis, oxidation and reduction. Specifically, when a prodrug is administered to a patient, the prodrug may be transformed into a compound disclosed herein above, thereby imparting the desired pharmacological effect.
  • the compounds of the invention are effective inhibitors of Tec kinase family activity, especially of Itk. Therefore, in one embodiment of the invention, there is provided methods of treating immunological disorders using compounds of the invention. In another embodiment, there is provided methods of treating inflammatory disorders using compounds of the invention. In yet another embodiment, there is provided methods of treating allergic disorders using compounds of the invention. In yet still another embodiment, there is provided methods of enhancing memory cell generation for vaccines using compounds of the invention. In a further embodiment, there is provided methods of treating cell proliferative disorders using compounds of the invention.
  • the compounds of this invention modulate T cell and mast cell activation via effective inhibition of Itk.
  • the inhibition of T cell activation is therapeutically useful for selectively suppressing immune function.
  • the inliibition of Itk is an attractive means for preventing and treating a variety of immune disorders, including inflammatory diseases, autoimmune diseases, organ and bone marrow transplant rejection and other disorders associated with T cell mediated immune response.
  • the compounds of the invention may be used to prevent or treat acute or chronic inflammation, allergies, contact dermatitis, psoriasis, rheumatoid arthritis, multiple sclerosis, type 1 diabetes, inflammatory bowel disease, Guillain-Barre syndrome, Crohn's disease, ulcerative colitis, cancer, graft versus host disease (and other forms of organ or bone marrow transplant rejection) and lupus erythematosus.
  • the compounds of the invention are also effective inhibitors of Tec family kinases other than Itk including Txk, Tec, Btk, and Bmx and would thus be useful in treating diseases associated with the activity of one or more of these Tec family kinases.
  • Inhibitors of mast cell activation and degranulation block the release of allergic and pro- inflammatory mediators and cytokines.
  • inhibitors of Itk have potential utility in treating inflammatory and allergic disorders, including asthma, chronic obstructive pulmonary disease (COPD), adult respiratory distress syndrome (ARDS), bronchitis, conjunctivitis, dermatitis and allergic rhinitis.
  • COPD chronic obstructive pulmonary disease
  • ARDS adult respiratory distress syndrome
  • bronchitis conjunctivitis
  • dermatitis dermatitis
  • allergic rhinitis allergic rhinitis
  • Other disorders associated with T cell or mast cell mediated immune response will be evident to those of ordinary skill in the art and can also be treated with the compounds and compositions of this invention.
  • Inhibitors of Itk and other Tec family kinases have potential utility in combination with other therapies for the treatment of immune, inflammatory, proliferative, and allergic disorders. Examples, though not all encompassing, include co-administration with steroids, leukotriene antagonists, anti-histamines, cyclosporin, or rapamycin.
  • the compounds of the invention may be administered in any conventional dosage form in any conventional manner.
  • Routes of administration include, but are not limited to, intravenously, intramuscularly, subcutaneously, intrasynovially, by infusion, sublingually, transdermally, orally, topically or by inhalation.
  • the preferred modes of administration are oral and intravenous.
  • the compounds of this invention may be administered alone or in combination with adjuvants that enhance stability of the inhibitors, facilitate administration of pharmaceutic compositions containing them in certain embodiments, provide increased dissolution or dispersion, increase inhibitory activity, provide adjunct therapy, and the like, including other active ingredients.
  • combination therapies utilize lower dosages of the conventional therapeutics, thus avoiding possible toxicity and adverse side effects incurred when those agents are used as monotherapies.
  • Compounds of the invention may be physically combined with the conventional therapeutics or other adjuvants into a single pharmaceutical composition.
  • the compounds may then be administered together in a single dosage form.
  • the pharmaceutical compositions comprising such combinations of compounds contain at least about 5%, but more preferably at least about 20%, of a compound of formula (I) (w/w) or a combination thereof.
  • the optimum percentage (w/w) of a compound of the invention may vary and is within the purview of those skilled in the art.
  • the compounds may be administered separately (either serially or in parallel). Separate dosing allows for greater flexibility in the dosing regime.
  • dosage forms of the compounds of this invention include pharmaceutically acceptable carriers and adjuvants known to those of ordinary skill in the art.
  • carriers and adjuvants include, for example, ion exchangers, alumina, aluminum stearate, lecithin, serum proteins, buffer substances, water, salts or electrolytes and cellulose-based substances.
  • Preferred dosage forms include, tablet, capsule, caplet, liquid, solution, suspension, emulsion, lozenges, syrup, reconstitutable powder, granule, suppository and transdermal patch. Methods for preparing such dosage forms are known (see, for example, H.C. Ansel and N.G.
  • Dosage levels and requirements are well-recognized in the art and may be selected by those of ordinary skill in the art from available methods and techniques suitable for a particular patient. In some embodiments, dosage levels range from about 1-1000 mg/dose for a 70 kg patient. Although one dose per day may be sufficient, up to 5 doses per day may be given. For oral doses, up to 2000 mg/day may be required. As the skilled artisan will appreciate, lower or higher doses may be required depending on particular factors. For instance, specific dosage and treatment regimens will depend on factors such as the patient's general health profile, the severity and course of the patient's disorder or disposition thereto, and the judgment of the treating physician.
  • Tec Family Kinase Assay Itk, Txk, Tec, Btk, and Bmx are purified as a GST-fosion protein.
  • the kinase activity is measured using DELFIA (Dissociation Enhanced Lanthanide Fluoroimmunoassay) which utilizes europium chelate-labeled anti-phosphotyrosine antibodies to detect phosphate transfer to a random polymer, poly Glv ⁇ : Tyri (PGTYR).
  • DELFIA Dissociation Enhanced Lanthanide Fluoroimmunoassay
  • PTYR Poly Glv ⁇ : Tyri
  • the kinase assay is performed in kinase assay buffer (50 mM HEPES, pH 7.0, 25 mM MgCl 2 , 5 mM MnCl 2 , 50 mM KC1, 100 ⁇ M Na 3 VO , 0.2% BSA, 0.01% CHAPS, 200 ⁇ M TCEP).
  • Test samples initially dissolved in DMSO at 1 mg/mL are pre-diluted for dose response (10 doses with starting final concentration of 3 ⁇ g/mL, 1 to 3 serial dilutions) with the assay buffer in 96-well polypropylene microtiter plates.
  • a 50 ⁇ L volume/well of a mixture of substrates containing ATP (final ATP concentration in each kinase assay is equal to its apparent ATP K m ) and 3.6 ng/ ⁇ L PGTYR-biotin (CIS Bio International) in kinase buffer is added to neutravidin coated 96- well white plate (PIERCE), followed by 25 ⁇ L/well test sample solution and 25 ⁇ L/well of diluted enzyme (1-7 nM final cone). Background wells are incubated with buffer, rather than 25 ⁇ L enzyme. The assay plates are incubated for 30 min at room temperature. Following incubation, the assay plates are washed three times with 250 ⁇ L DELFIA wash buffer.
  • a 100 ⁇ L aliquot of 1 nM europium-labeled anti-phosphotyrosine (Eu 3+ -PT66, Wallac CR04-100) diluted in DELFIA assay buffer is added to each well and incubated for 30 min at room temperature. Upon completion of the incubation, the plate is washed four times with 250 ⁇ L of wash buffer and 100 ⁇ L of DELFIA Enhancement Solution (Wallac) is added to each well. After 15 min of longer, time- resolved fluorescence is measured (excitation at 360 nm, emission at 620 nm) after a delay time of 250 ⁇ s.
  • Preferred compounds of the invention have an activity of 1 microMolar or less.
  • the invention also provides processes for making compounds of formula I.
  • R or Ar substituents in the formulas below shall have the meaning of R or Ar substituents in the formula I of the invention described herein above.
  • Intermediates used in the preparation of compounds of the invention are either commercially available or readily prepared by methods known to those skilled in the art. Further reference in this regard may be made to WO 03/041708 corresponding to US publication US 2003-0144281, and PCT application PCT/US03/24024 corresponding to US application no. 10/632,888, and US provisional no.60/536,362.
  • Compounds of formula I in which T is in the 5-position and is -N(R 7 )C(O)R 5, X a is O and Rt is H may be prepared by the method outlined in Scheme I.
  • a 4-halo-3-nitroaniline II preferably 4-fluoro-3-nitroaniline
  • R 5 C(O)Cl is reacted with a suitable base such as pyridine to form amide III.
  • This intermediate is then reacted with R 3 NH 2 in the presence of a base such as triethylamine to form IV.
  • Reduction of the nitro group by methods known in the art, for example by treatment with hydrogen or a hydrogen source such as ammonium carbonate in the presence of a catalyst such as palladium on carbon provides V.
  • Reaction of V with cyanogen bromide in a suitable solvent such as ethanol provides benzimidazole VI.
  • reaction of V with thiopseudourea in the presence of catalytic amount of acid such as p-toluene sulfonic acid (pTSA), followed by a deprotection of the carbamate group provides benzimidazole VI.
  • Reaction of VI with Ar 2 -Ar ⁇ C(O)Cl in the presence of a base such as pyridine provides the desired compound of formula (I).
  • reaction of VI with Ar -Ar 1 COOH in the presence of a suitable coupling reagent such as l-(3-dimethylaminopropyl)-3-ethylcarbodiimide (EDC) and a base such as diisopropylethylamme provides the desired compound formula (I).
  • XII 4- halo-3-nitrobenzoic acid
  • XIII a 4-fluoro-3-nitrobenzoic acid
  • R 7 NH 2 a suitable coupling reagent
  • EDC l-(3-dimethylaminopropyl)-3- ethylcarbodiimide
  • XIII Reaction of XIII with R 3 NH 2 in the presence of a suitable base such as triethylamine provides XIV.
  • a 4-halo-3 -nitro benzyl alcohol preferably a 4-fluoro- 3 -nitro benzyl alcohol is protected with a suitable protecting group such as a triisopropylsilyl group, to provide XVIII, where P is a protecting group.
  • a suitable protecting group such as a triisopropylsilyl group
  • P is a protecting group.
  • Reaction of XVIII with R 3 NH 2 in the presence of a suitable base such as triethylamine provides XIX.
  • Reduction of the nitro group for example by treatment with a hydrogen source such as ammonium formate in the presence of a catalyst such as palladium on carbon provides XX.
  • Reaction of XX with cyanogen bromide in a suitable solvent such as ethanol provides benzimidazole intermediate XXI.
  • Reaction of XXI with Ar 2 -Ar ⁇ C(O)Cl in the presence of a base such as diisopropylethylamine produces amide XXII.
  • Deprotection of the benzyl alcohol for example by treatment with dilute acid if P is a triisopropylsilyl group, gives XXIII.
  • the benzyl alcohol is then treated with a suitable oxidizing reagent such as MnO to provide the aldehyde XXIV.
  • Reaction of XXIV with R R 5 NH under reductive amination conditions provides the desired compound of formula (I) in which I ⁇ t is -CH N(R 5 )(R ) and is in the 5-position.
  • the aldehyde (0.2g) was dissolved in THF (20mL) and treated with Burgess Reagent (enough to drive reaction to completion, >2eq.; the Burgess reagent should be either recrystallized/purified/or freshly prepared) and warmed to 70°C.
  • the reaction mixture was treated with silica gel and concentrated.
  • the remaining solid was purified via CombiFlash (lOg SiO 2 , dichloromethane, 20mL/min, UV detection at 254nm).
  • the product-containing fractions were combined and concentrated to give 20mg of the desired product (by LC-MS, not recorded) which was used without further purification.
  • a degassed solution of sodium carbonate (3.0 mL; 2.0M in H 2 O) was added to a stirred solution of 5-di(hydroxyboryl)-2-thiophene carboxylic acid (300 mg), 4-bromo-2- fluoropyridine (307 mg), dichlorobis(triphenylphosphine) palladium (II) (60 mg) in degassed DMF (7.5 mL).
  • the reaction mixture was heated at 100 °C for 6h.
  • the reaction mixture was allowed to cool to room temperature, acidified with IM HCI, and filtered.
  • the solid was dissolved in a 1:1 mixture of MeOH: acetone, decolorizing charcoal was added, and the solution was filtered through a diatomaceous earth pad.
  • the solution was dried with sodium sulfate and the sample concentrated under educed pressure to give 310mg (80%) of title compound.
  • Example 9 and 10 illustrate the synthesis of 2-aminobenzimidazole derivatives useful in the preparation of compounds of formula (T).
  • Examples 11-14 illustrate syntheses of compounds of formula (I) using intermediates from the above examples or prepared as described in the above examples.
  • reaction mixture was diluted with water, precipitate formed which was collected by filtration and purified by combiflash to yield 120 mg (4- ⁇ 5-[5-(benzoyl- methyl-amino)- 1 -(2-carbamoyl-ethyl)- lH-benzoimidazol-2-ylcarbamoyl] -thiophen-2- yl ⁇ -thiazol-2-yl)-carbamic acid tert-butyl ester. Yield 50%.
  • Example 16 Preparation of 5-(2-methyl-oxazol-5-vD-thiophene-2-carboxylic acid [5- f(cyclohexyl-methyl-amino)-methvn-l-(2-hydroxy-2-methyl-propylVlH- benzoimidazol-2-vn -amide
  • Example carboxylic acid [5-[(3-cyano- 114 benzoyl)-methyl-amino]-l-((R)- 599 hydroxy-2-phenyl-ethyl)- 1 ⁇ - benzoimidazol-2-yl] -amide

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Abstract

Disclosed are compounds of formula (I): wherein Ar1, Ar2, R1, R2, R3, R4 and Xa are defined herein. The compounds of the invention inhibit Itk kinase and are therefore useful for treating diseases and pathological conditions involving inflammation, immunological disorders and allergic disorders. Also disclosed are processes for preparing these compounds and to pharmaceutical compositions comprising these compounds.

Description

THIOPHENE-2-CARBOXYLIC ACID - (1H-BENZIMIDAZOL-2-YL) -AMIDE DERIVATIVES AND RELATED COMPOUNDS AS INHIBITORS OF THE TEC KINASE ITK (INTERLEUKIN-2-INDUCIBLE T CELL KINASE) FOR THE TREATMENT OF INFLAMMATION, IMMUNOLOGICAL AND ALLERGIC DISORDERS APPLICATION DATA This application claims benefit to US provisional application no. 60/544,218 filed 02/12/2004.
TECHNICAL FIELD OF THE INVENTION This invention relates to substituted benzimidazole compounds of formula(I):
Figure imgf000003_0001
wherein Ari, Ar2, Ri, R2, R3, R4 and Xa are defined herein below. The compounds of the invention inhibit Itk kinase and are therefore useful for treating diseases and pathological conditions involving inflammation, immunological disorders and allergic disorders. This invention also relates to processes for preparing these compounds and to pharmaceutical compositions comprising these compounds.
BACKGROUND OF THE INVENTION Protein kinases play a critical role in mediating signaling events leading to cellular responses such as activation, growth and differentiation, in response to extracellular signals. Protein kinases transmit their signal by phosphorylating specific residues in a target protein. Protein kinases that specifically phosphorylate tyrosine residues are referred to as protein tyrosine kinases. Protein tyrosine kinases can be divided into two general groups: receptor such as epidermal growth factor (EGF) receptor (S. Iwashita and M. Kobayashi, 1992, Cellular Signalling, 4, 123-132) and cytosolic non-receptor (C. Chan et al., 1994, Ann. Rev. Immunol., 12, 555-592).
Interleukin-2-inducible T cell kinase (Itk), also referred to as T cell-specific kinase (Tsk) and expressed mainly in T-lymphocytes (EMT), is a member of the Tec family of protein tyrosine kinases that also includes Txk, Tec, Btk, and Bmx. Tec family members are characterized by the presence of a pleckstrin-homology domain (PH), a proline rich Tec homology domain (TH) and Src homology SH3, SH2 and SHI kinase domains positioned from the N-terminus to the C-terminus respectively (S. Gibson et al., 1993, Blood, 82,1561-1572; J. D. Siliciano et al, 1992, Proc. Nat. Acad. Sci., 89, 11194-11198; N. Yamada et al., 1993 Biochem.and Biophys Res. Comm., 192, 231 -240).
Itk is expressed in T cells, mast cells and natural killer cells. It is activated in T cells upon stimulation of the T cell receptor (TCR), and in mast cells upon activation of the high affinity IgE receptor. Following receptor stimulation in T cells, Lck, a src tyrosine kinase family member, phosphorylates Y511 in the kinase domain activation loop of Itk (S. D. Heyeck et al., 1997, J. Biol. Chem, 272, 25401-25408). Activated Itk, together with Zap-70 is required for phosphorylation and activation of PLC-γ (S. C. Bunnell et al., 2000, J. Biol. Chem., 275, 2219-2230). PLC-γ catalyzes the formation of inositol 1,4,5- triphosphate and diacylglycerol, leading to calcium mobilization and PKC activation, respectively. These events activate numerous downstream pathways and lead ultimately to degranulation (mast cells) and cytokine gene expression (T cells) (Y. Kawakami et al., 1999, J. Leukocyte Biol., 65, 286-290).
The role of Itk in T cell activation has been confirmed in Itk knockout mice. CD4+T cells from Itk knockout mice have a diminished proliferative response in a mixed lymphocyte reaction or upon Con A or anti-CD3 stimulation. (X. C. Liao and D.R. Littman, 1995, Immunity, 3, 757-769). Also, T cells from Itk knockout mice produced little IL-2 upon TCR stimulation resulting in reduced proliferation of these cells. In another study, Itk deficient CD4+ T cells produced reduced levels of cytokines including IL-4, IL-5 and IL- 13 upon stimulation of the TCR, even after priming with inducing conditions. (D.J. Fowell, 1999, Immunity, 11, 399-409).
The role of Itk in PLC-γ activation and in calcium mobilization was also confirmed in the T cells of these knockout mice, which had severely impaired IP3 generation and no extracellular calcium influx upon TCR stimulation (K. Liu et al., 1998, J. Exp. Med. 187, 1721-1727). The studies described above support a key role for Itk in activation of T cells and mast cells. Thus an inhibitor of Itk would be of therapeutic benefit in diseases mediated by inappropriate activation of these cells.
It has been well established that T cells play an important role in regulating the immune response (Powrie and Coffman, 1993, Immunology Today, 14, 270-274). Indeed, activation of T cells is often the initiating event in immunological disorders. Following activation of the TCR, there is an influx of calcium that is required for T cell activation. Upon activation, T cells produce cytokines, including IL-2,4, 5, 9, 10, and 13 leading to T cell proliferation, differentiation, and effector function. Clinical studies with inhibitors of IL-2 have shown that interference with T cell activation and proliferation effectively suppresses immune response in vivo (Waldmann, 1993, Immunology Today, 14, 264- 270). Accordingly, agents that inhibit T lymphocyte activation and subsequent cytokine production, are therapeutically useful for selectively suppressing the immune response in a patient in need of such immunosuppression.
Mast cells play a critical roll in asthma and allergic disorders by releasing pro- inflammatory mediators and cytokines. Antigen-mediated aggregation of FcεRI, the high-affinity receptor for IgE results in activation of mast cells (D.B. Corry et al., 1999, Nature, 402, B18-23). This triggers a series of signaling events resulting in the release of mediators, including histamine, proteases, leukotrienes and cytokines (J.R. Gordon et al., 1990, Immunology Today, 11, 458-464.) These mediators cause increased vascular permeability, mucus production, bronchoconstriction, tissue degradation and inflammation thus playing key roles in the etiology and symptoms of asthma and allergic disorders.
Recent published data using Itk knockout mice suggests that in the absence of Itk function, increased numbers of memory T cells are generated (A.T. Miller et al., 2002
The Journal of Immunology, 168, 2163-2172). One strategy to improve vaccination methods is to increase the number of memory T cells generated (S.M. Kaech et al., Nature Reviews Immunology, 2, 251-262). All patent and literature documents cited in this application are incorporated by reference in their entirety.
SUMMARY OF THE INVENTION
It is therefore an object of the invention to provide a compound of the formula (I):
Figure imgf000006_0001
wherein Arls Ar2, Ri, R2, R3, R4 and Xa are defined herein below.
It is another object of the invention to provide a method of inhibiting the Tec kinase family, including Itk kinase, and methods of treating diseases or conditions related to such kinase activity activity, by administering to a patient in need thereof a therapeutically effective amount of a compound of the formula (I).
It is yet another object of the invention to provide pharmaceutical compositions and processes of making compounds of the formula (I) as described herein below.
DETAILED DESCRIPTION OF THE PREFERRED EMBODIMENTS
In it's broadest generic embodiment, the invention provides for a compound of the formula (I):
Figure imgf000007_0001
wherein:
Ri is hydrogen or alkyl;
R2, covalently attached at the indicated 4-, 5-, 6- or 7-position of the formula (I), is chosen from hydrogen, alkyl, alkoxy and halogen;
Ari is chosen from carbocycle and heteroaryl each optionally substituted with one or more amine, alkyl, alkoxy or halogen;
Ar2 is chosen from carbocycle, heterocycle and heteroaryl each optionally substituted with one or more Ra;
R3 is Ci-io alkyl chain branched or unbranched optionally substituted with one or more
Rb, or R3 is the group:
-(CH2)n- L-Rβ, wherein L is chosen from a bond, -NH-C(O)-, -O-C(O)-, -C(O)- and -S(O)m- wherein m is 0, 1 or 2, and wherein said group is optionally substituted by one or more Rb; wherein Rδ is independently chosen from hydrogen, hydroxy, alkyl, alkoxy, alkylthio, arylCo-5 alkyl, aryloxyCo-5 alkyl, heteroarylCo-s alkyl, cycloalkylCo-s alkyl, heterocyclylCo-5 alkyl and amino said amino is optionally mono-or di-substituted by acyl, alkyl, alkoxycarbonyl, cycloalkylCo-5 alkyl, arylCo-5 alkyl, heteroarylCo-5 alkyl or heterocyclylCo-5 alkyl; n is 1 - 10; Rt is a group chosen from:
Figure imgf000008_0001
or Rt is
Figure imgf000008_0002
wherein if p or q > 0 then a hydrogen atom from their respective -(CH2)- group(s) may be replaced with a
Figure imgf000008_0003
alkyl wherein one or more -CH2- groups of said alkyl are optionally replaced by a heteroatom group chosen from O, S and NH,
wherein Rj is covalently attached at the indicated 5- or 6- position of the formula (I), p, q, t and z are each independently chosen from 0,1 or 2;
Rs is chosen from arylCo-5 alkyl, alkyl, heteroarylCo-5 alkyl, cycloalkylCo-5 alkyl and heterocyclylCo-5 alkyl, each R5 optionally substituted with one or more Rc;
R7 is hydrogen, alkenyl or alkyl;
or R5 and R7 together with the nitrogen atom to which they are attached form: a 4-7 -membered monocyclic ring or an 8-14-membered bicyclic ring, wherein each monocyclic or bicyclic ring optionally contains an additional 1 to 3 heteroatoms chosen from N, O and S and each ring is aromatic or nonaromatic, and wherein each monocyclic or bicyclic ring is optionally substituted by one or more Rc; each Ra, Rb or Rc are independently chosen from hydrogen, alkyl, alkenyl, alkynyl, cycloalkyl, cycloalkenyl, aryl, arylalkyl, aryloxy, alkoxy, alkylthio, acyl, alkoxycarbonyl, acyloxy, acylamino, sulphonylamino, aminosulfonyl, alkylsulfonyl, carboxy, carboxamide, oxo, hydroxy, halogen, trifluoromethyl, nitro, nitrile and amino optionally mono-or-di-substituted by alkyl, acyl or alkoxycarbonyl, wherein any of the above Ra, R or Rc are optionally halogenated where possible;
and
Xa and Xb are oxygen or sulfur; or the pharmaceutically acceptable salts, esters, acids, isomers or tautomers thereof.
In another embodiment, there is provided a compound of the formula (I) as described immediately above and wherein:
Ri is hydrogen;
R2 is chosen from hydrogen, Cι-3 alkyl, Cι-3 alkoxy and halogen;
An is phenyl or heteroaryl chosen from thienyl, furanyl, isoxazolyl, oxazolyl, thiazolyl, oxadiazolyl, thiadiazolyl, tetrazolyl, pyrazolyl, pyrrolyl, imidazolyl, pyridinyl, pyrimidinyl, pyrazinyl, pyridazinyl and pyranyl;
Ar2 is chosen from C3.8 cycloalkyl, C4-8 cycloalkenyl, phenyl, naphthyl and heteroaryl chosen from thienyl, furanyl, isoxazolyl, oxazolyl, thiazolyl, thiadiazolyl, tetrazolyl, pyrazolyl, pyrrolyl, imidazolyl, pyridinyl, pyrimidinyl, pyrazinyl, pyridazinyl, pyranyl, quinoxalinyl, indolyl, benzimidazolyl, benzoxazolyl, benzothiazolyl, benzothiophenyl, benzodioxolyl, quinolinyl, quinazolinyl and indazolyl each is optionally substituted with one or more Ra; R3 is Ci-io alkyl chain branched or unbranched optionally substituted with one or more
Figure imgf000010_0001
-(CH2)n- L-Rβ, wherein L is chosen from a bond, -O-C(O)-, -C(O)- and - S(O)m- wherein m is 0, 1 or 2, and wherein said group is optionally substituted by one or more Rb; wherein Re is independently chosen from hydrogen, hydroxy, C1-5 alkyl, Cι-5 alkoxy, Cι-5 alkylthio, phenyl, naphthyl, benzyl, phenethyl, heteroarylCo-5 alkyl, C3-7 cycloalkylC0.5 alkyl, heterocyclylCo-5 alkyl and amino said amino is optionally mono-or di-substituted by Cι-5 acyl, C1-5 alkyl, C1-5 alkoxycarbonyl, arylCo-5 alkyl, heteroarylC0-5 alkyl or heterocyclylCo-5 alkyl; and wherein each recited heteroaryl in this paragraph is chosen from thienyl, furanyl, isoxazolyl, oxazolyl, thiazolyl, thiadiazolyl, tetrazolyl, pyrazolyl, pyrrolyl, imidazolyl, pyridinyl, pyrimidinyl, pyrazinyl, pyridazinyl and pyranyl and wherein each recited heterocyclyl in this paragraph is chosen from pyrrolidinyl, morpholinyl, thiomorpholinyl, dioxalanyl, piperidinyl and piperazinyl;
Rj is a group chosen from:
Figure imgf000010_0002
Rs is chosen from phenyl, naphthyl, benzyl, phenethyl, C1-5 alkyl, heteroarylCo-s alkyl wherein the heteroaryl is chosen from thienyl, furanyl, isoxazolyl, oxazolyl, thiazolyl, thiadiazolyl, tetrazolyl, pyrazolyl, pyrrolyl, imidazolyl, pyridinyl, pyrimidinyl, pyrazinyl, pyridazinyl and pyranyl, C3-7 cycloalkylCo-5 alkyl and heterocyclylCo-5 alkyl wherein the heterocyclyl is chosen from aziridinyl, pyrrolidinyl, morpholinyl, thiomorpholinyl, tetrahydrofuranyl, dioxalanyl, piperidinyl and piperazinyl, each R5 is optionally substituted with one or more Rc; each Ra, Rb or Rc are independently chosen from hydrogen, C1.5 alkyl, C2-5 alkenyl, C -5 alkynyl, C3-8 cycloalkyl, C4-8 cycloalkenyl, phenyl, benzyl, phenoxy, Cι-5 alkoxy, Cι-5 alkylthio, C1-5 acyl, C1-5 alkoxycarbonyl, C1-5 acyloxy, Cι-5 acylamino, Cι-5 sulphonylamino, aminosulfonyl, C1-5 alkylsulfonyl, carboxy, carboxamide, oxo, hydroxy, halogen, trifluoromethyl, nitro, nitrile and amino optionally mono-or-di-substituted by Ci- 5 alkyl, Cμs acyl or Ci-s alkoxycarbonyl, wherein any of the above Ra, Rb or Rcare optionally halogenated where possible;
R7 is hydrogen, C3.ιo alkenyl or C^s alkyl; and
Xa is oxygen.
In yet another embodiment, there is provided a compound of the formula (I) as described immediately above and wherein:
R2 is chosen from hydrogen and C1.3 alkyl;
Ari is chosen from phenyl, thienyl, furanyl, isoxazolyl, oxazolyl, imidazolyl, oxadiazolyl, thiadiazolyl, pyrazolyl and pyridinyl;
Ar2 is chosen from C4-8 cycloalkenyl, C4-8 cycloalkyl, phenyl, naphthyl, benzothiophenyl, benzodioxolyl, quinolinyl, indolyl, thiazolyl, thienyl, furanyl, isoxazolyl, oxazolyl, imidazolyl, thiadiazolyl, pyrazolyl, pyrazinyl and pyridinyl each is optionally substituted with one or more Ra ;
Re is independently chosen from hydroxy, Cι-5 alkyl, C1.5 alkoxy, phenyl, benzyl, phenethyl, heteroarylCo-5 alkyl, heterocycrylCo-5 alkyl, C3-7 cycloalkyl and amino said amino is optionally mono-or di-substituted by C1.5 acyl, Cι-5 alkyl, C1.5 alkoxycarbonyl, arylCo-s alkyl or heteroarylCo-5 alkyl; and wherein each recited heteroaryl in this paragraph is chosen from tliienyl, furanyl, isoxazolyl, oxazolyl, thiazolyl, thiadiazolyl, tetrazolyl, pyrazolyl, pyrrolyl and imidazolyl, each optionally substituted by R ; n is 1-6;
R5 is chosen from phenyl, naphthyl, benzyl, phenethyl, C1-5 alkyl, heteroarylC0-5 alkyl wherein the heteroaryl in this paragraph is chosen from thienyl, furanyl, imidazolyl and pyridinyl, C3-7 cycloalkylC0-5 alkyl and heterocyclylCo-s alkyl wherein the heterocyclyl is chosen from aziridinyl, pyrrolidinyl, tetrahydrofuranyl, tetrahydropyridinyl, morpholinyl, thiomorpholinyl, piperidinyl and piperazinyl, each R5 is optionally substituted with one or more Rc;
R7 is hydrogen, propenyl or C1-3 alkyl.
In yet still another embodiment, there is provided a compound of the formula (I) as described immediately above and wherein:
R2 is chosen from hydrogen and methyl;
Ar2 is chosen from cyclopentyl, cyclohexyl, cycloheptyl, cyclopentenyl, cyclohexenyl, cycloheptenyl,phenyl, naphthyl, benzothiophenyl, benzodioxolyl, quinolinyl, indolyl, thiazolyl, thienyl, furanyl, isoxazolyl, oxazolyl, imidazolyl, thiadiazolyl, oxadiazolyl, pyrazinyl and pyridinyl each is optionally substituted with one or more Ra;
Rs is: -(CH2)„-C(O)-R6 or
Figure imgf000012_0001
wherein Rg is independently chosen from hydroxy, C1-5 alkyl, Cι-5 alkoxy, phenyl, morpholinylCo-5 alkyl, piperazinylCo-5 alkyl, imidazolylCo-5 alkyl, pyrrolidinylC0-5 alkyl, pyrrolidinonylC0-5 alkyl, thienylC0-5 alkyl, C3-7 cycloalkyl and amino said amino is optionally mono-or di-substituted by Cι-5 alkyl or Ci-5 alkoxycarbonyl;
R5 is chosen from phenyl, furanyl, benzyl, phenethyl, C1-3 alkyl and C .7 cycloalkylC0-5 alkyl each optionally substituted with one or more Rc;
each Ra, Rb or Rc are independently chosen from C1-5 alkyl, C2.5 alkenyl, C3-8 cycloalkyl, C4.8 cycloalkenyl, phenyl, C1-5 alkoxy, Cι_5 alkylthio, amino optionally mono-or-di- substituted by Cι-5 alkyl, Cι-5 alkoxycarbonyl, carboxamide, hydroxy, halogen, trifluoromethyl, nitro and nitrile, wherein any of the above Ra, Rb or Rc are optionally halogenated where possible;
R7 is Cι-3 alkyl.
In a further embodiment, there is provided a compound of the formula (I) as described immediately above and wherein:
R2 is hydrogen;
Ari is chosen from phenyl, thienyl, furanyl, isoxazolyl and pyridinyl;
Ar2 is chosen from cycloheptyl, cycloheptenyl, phenyl, naphthyl, benzothiophenyl, benzodioxolyl, quinolinyl, indolyl, thiazolyl, thienyl, furanyl, isoxazolyl, oxazolyl, thiadiazolyl, pyrazinyl and pyridinyl each is optionally substituted with one or more Ra;
Rs is chosen from methyl, CF3, cyclopentyl, phenyl and cyclohexyl each optionally substituted with one or more Rc;
and n is 2-5.
In yet another embodiment, there is provided a compound of the formula (I) as described immediately above and wherein:
Ari is chosen from phenyl, thien-2-yl, isoxazol-5-yl and pyridin-3-yl;
Ra is chosen from phenyl, C6-8 cycloalkyl, C6.8 cycloalkenyl, Cι-3 alkoxy, Cι-4 alkyl, C2-3 alkenyl, Cι-3 alkylthio, amino, carboxamide, fluoro, chloro, nitro and nitrile;
R4 is chosen from:
Figure imgf000014_0001
Re is independently chosen from hydroxy, methyl, ethyl, Cι-3 alkoxy, phenyl, morpholinyl, piperazinyl, imidazolyl, pyrrolidinyl, pyrrolidinonyl, thienylCo-5 alkyl, C3-7 cycloalkyl and amino said amino is optionally mono-or di-substituted by C1-5 alkyl or C1-5 alkoxycarbonyl;
and each Rb or Rc are independently chosen from C1-3 alkoxy, amino optionally mono-or-di- substituted by Cι-3 alkyl, carboxamide, hydroxy, fluoro, chloro, bromo, trifluoromethyl, nitro and nitrile.
In any of the aforementioned embodiments, there are provided compounds of the formula (I) wherein: R4 is covalently attached at the indicated 5- position of the formula (I) or in another embodiment R4 is covalently attached at the indicated 6- position of the formula (I). In another embodiment, there is provided a compound in accordance with the broadest generic embodiment above:
Figure imgf000015_0001
and wherein:
Ar2 is chosen from cycloheptyl, cycloheptenyl, phenyl, naphthyl, benzothiophenyl, benzodioxolyl, quinolinyl, indolyl, thiazolyl, thienyl, furanyl, isoxazolyl, oxazolyl, thiadiazolyl, pyrazinyl and pyridinyl each is optionally substituted with one or more Ra chosen from phenyl, C6-8 cycloalkyl, C6-8 cycloalkenyl, C1-3 alkoxy, Cι-4 alkyl, C2-3 alkenyl, Cι-3 alkylthio, amino, carboxamide, fluoro, chloro, nitro and nitrile;
-(CH2)n-C(O)-R6 θr -(CH2)„- R6;
Re is independently chosen from hydroxy, methyl, ethyl, Cι-3 alkoxy, phenyl, morpholinyl, piperazinyl, imidazolyl, pyrrolidinyl, pyrrolidinonyl, thienylCo-5 alkyl, C3-7 cycloalkyl and amino said amino is optionally mono-or di-substituted by Cι-5 alkyl or C1-5 alkoxycarbonyl;
Rs is chosen from methyl, CF3, cyclopentyl, phenyl and cyclohexyl each optionally substituted with one or more Rc chosen from Cι-3 alkoxy, amino optionally mono-or-di- substituted by C1-3 alkyl, carboxamide, hydroxy, fluoro, chloro, bromo, trifluoromethyl, nitro and nitrile and
R is C1.3 alkyl. In another embodiment, there is provided a compound in accordance with the embodiment immediately above:
Figure imgf000016_0001
and wherein:
Ar2 is chosen from phenyl, indolyl, thiazolyl, tliienyl, furanyl, isoxazolyl, oxazolyl, thiadiazolyl, pyrazinyl and pyridinyl each is optionally substituted with one or more Ra chosen from phenyl, C6-8 cycloalkyl, C6-8 cycloalkenyl, Cι-3 alkoxy, Cι-4 alkyl, C2-3 alkenyl, C1-3 alkylthio, amino, carboxamide, fluoro, chloro, nitro and nitrile.
In another embodiment, there is provided a compound in accordance with the embodiment immediately above:
\ αAr and wherein:
Ar2 is chosen from
Figure imgf000016_0002
each is optionally substituted with one Ra chosen from phenyl, Cι-3 alkoxy, C1-4 alkyl, C2- 3 alkenyl, C1-3 alkylthio, amino, carboxamide, fluoro, chloro, nitro and nitrile;
with the proviso that if Ar2 is:
Figure imgf000017_0001
then Ra must be -NO2, -NH2 or -CN.
In another embodiment there is provided representative compounds of the invention which can be made in accordance with the general schemes and working examples presented below: Table I
5-Pyridin-2-yl-thiophene-2-carboxylic acid {1- (2-carbamoyl-ethyl)-5-[(2-cyclopentyl-acetyl)- methyl-amino] - 1 H-benzoimidazol-2-yl } -amide
5-Pyridin-2-yl-thiophene-2-carboxylic acid {5- [(2-cyclopentyl-acetyl)-methyl-amino] - 1 - [3 -(2- oxo-pyrrolidin- 1 -yl)-propyl] - 1 H- benzoimidazol-2-yl} -amide
5-Phenyl-thiophene-2-carboxylic acid {5-[(2- cyclopentyl-acetyl)-methyl-amino] - 1 - [3 -(2-oxo- pyrrolidin- 1 -yl)-propyl] - 1 H-benzoimidazol-2- yl} -amide
Figure imgf000017_0002
5-Phenyl-thiophene-2-carboxylic acid {5- (benzoyl-methyl-amino)- 1 - [3 -(2-oxo- pyrrolidin- 1 -yl)-propyl] - 1 H-benzoimidazol-2- yl} -amide
5-Pyridin-2-yl-thiophene-2-carboxylic acid {5- (benzoyl-methyl-amino)- 1 - [3 -(2-oxo- pyrrolidin- 1 -yl)-propyl] - 1 H-benzoimidazol-2- yl} -amide
5-Pyridin-4-yl-thiophene-2-carboxylic acid [5- (benzoyl-methyl-amino)- 1 -(2-carbamoyl-ethyι)- 1 H-benzoimidazol-2-yl] -amide
5-Pyridin-4-yl-thiophene-2-carboxylic acid {5- (benzoyl-methyl-amino)- 1 - [3 -(2-oxo- pyrrolidin- 1 -yl)-propyl]- 1 H-benzoimidazol-2- yl} -amide
5-Pyridin-3-yl-thiophene-2-carboxylic acid {5- (benzoyl-methyl-amino)- 1 - [3 -(2-oxo- pyrrolidin- 1 -yl)-propyl] - 1 H-benzoimidazol-2- yl} -amide
5-(3 -Nitro-phenyl)-thiophene-2-carboxylic acid [5-(benzoyl-methyl-amino)- 1 -(2-carbamoyl- ethyl)-lH-benzoimidazol-2-yl]-amide
Figure imgf000018_0001
5-Phenyl-thiophene-2-carboxylic acid [5- (benzoyl-methyl-amino)- 1 -(2-carbamoyl-ethyl)- lH-benzoimidazol-2-yl]-amide
5-Pyridin-2-yl-thiophene-2-carboxylic acid [5- (benzoyl-methyl-amino)- 1 -(2-carbamoyl-ethyl)- 1 H-benzoimidazol-2-yl] -amide
5-(3-Methoxy-phenyl)-thiophene-2-carboxylic acid [5-(benzoyl-methyl-amino)- 1 -(2- carbamoyl-ethyl)- 1 Η-benzoimidazol-2-yl] - amide
5-(4-Methoxy-phenyl)-thiophene-2-carboxylic acid [5-(benzoyl-methyl-amino)- 1 ~(2- carbamoyl-ethyl)-lH-benzoimidazol-2-yI]- amide
5-o-Tolyl-thiophene-2 -carboxylic acid [5- (benzoyl-methyl-amino)- 1 -(2-carbamoyl-ethyl)- 1 H-benzoimidazol-2-yl] -amide
5-m-Tolyl-thiophene-2-carboxylic acid [5- (benzoyl-methyl-amino)- 1 -(2-carbamoyl-ethyl)- 1 H-benzoimidazol-2-yl] -amide
Figure imgf000019_0001
5-p-Tolyl-thiophene-2-carboxylic acid [5- (benzoyl-methyl-amino)- 1 -(2-carbamoyl-ethyι)- 1 H-benzoimidazol-2-yl] -amide
5-Pyridin-3-yl-thiophene-2-carboxylic acid [5- (benzoyl-methyl-amino)- 1 -(2-carbamoyl-ethyl)- 1 H-benzoimidazol-2-yl] -amide
Figure imgf000020_0001
5-(4-Nitro-phenyl)-thiophene-2-carboxylic acid [5-(benzoyl-methyl-amino)- 1 -(2-carbamoyl- ethyl)- 1 H-benzoimidazol-2-yl] -amide
5-(3-Amino-phenyl)-thiophene-2-carboxylic acid [5-(benzoyl-methyl-amino)- 1 -(2- carbamoyl-ethyl)- 1 H-benzoimidazol-2-yl] - amide
5-(4-Chloro-phenyl)-thiophene-2-carboxylic acid [5 -(benzoyl-methyl-amino)- 1 -(2- carbamoyl-ethyl)-lΗ-benzoimidazol-2-yl]- amide
5-(2-Methoxy-phenyl)-thiophene-2-carboxylic acid [5 -(benzoyl-methyl-amino)- 1 -(2- carbamoyl-ethyl)-lH-benzoimidazol-2-yl]- amide
Figure imgf000020_0002
5-Naphthalen- 1 -yl-thiophene-2-carboxylic acid [5 -(benzoyl-methyl-amino)- 1 -(2-carbamoyl- ethyl)-lH-benzoimidazol-2-yl]-amide
5-(3,5-Dichloro-phenyl)-thiophene-2- carboxylic acid [5-(benzoyl-methyl-amino)-l- (2-carbamoyl-ethyl)-lH-benzoimidazol-2-yl]- amide
5-(2,4-Difluoro-phenyl)-thiophene-2-carboxylic acid [5-(benzoyl-methyl-amino)- 1 -(2- carbamoyl-ethyl)- 1 H-benzoimidazol-2-yl] - amide
5-(4-Methylsulfanyl-phenyl)-thiophene-2- carboxylic acid [5-(benzoyl-methyl-amino)-l- (2-carbamoyl-ethyl)-lH-benzoimidazol-2-yl]- amide
5-Benzo[b]thiophen-2-yl-thiophene-2- carboxylic acid [5 -(benzoyl-methyl-amino)- 1- (2-carbamoyl-ethyl)-lH-benzoimidazol-2-yl]-
Figure imgf000021_0001
amide
5-Benzo[l,3]dioxol-5-yl-thiophene-2- carboxylic acid [5-(benzoyl-methyl-amino)-l- (2-carbamoyl-ethyl)- 1 H-benzoimidazol-2-yl] - amide
Figure imgf000021_0002
5-Quinolin-8-yl-thiophene-2-carboxylic acid [5- (benzoyl-methyl-amino)- 1 -(2-carbamoyl-ethyl)- lH-benzoimidazol-2-yl] -amide
5-(lH-Indol-5-yl)-thiophene-2-carboxyιic acid [5-(benzoyl-methyl-amino)-l-(2-carbamoyl- ethyl)- 1 H-benzoimidazol-2-yl] -amide
5 -(6-Nitro-pyridin-3 -yl)-thiophene-2-carboxylic acid [5-(benzoyl-methyl-amino)- 1 -(2- carbamoyl-ethyl)- 1 H-benzoimidazol-2-yl] - amide
5-(2-Chloro-phenyl)-thiophene-2-carboxylic acid [5 -(benzoyl-methyl-amino)- 1 -(2- carbamoyl-ethyl)- 1 Η-benzoimidazol-2-yl] - amide
5-(3-Chloro-phenyl)-thiophene-2-carboxylic acid [5-(benzoyl-methyl-amino)- 1 -(2- carbamoyl-ethyl)- 1 H-benzoimidazol-2-yl] -
Figure imgf000022_0001
amide
5 -(6- Amino-pyridin-3 -yl)-thiophene-2- carboxylic acid [5-(benzoyl-methyl-amino)-l- (2-carbamoyl-ethyl)-lH-benzoimidazol-2-yl]-
Figure imgf000022_0002
amide 5 -(4- Vinyl-phenyl)-thiophene-2-carboxylic acid [5-(benzoyl-methyl-amino)- 1 -(2-carbamoyl- ethyl)- 1 H-benzoimidazol-2-yl] -amide
Figure imgf000023_0001
5 -Biphenyl-4-yl-thiophene-2-carboxylic acid [5-(benzoyl-methyl-amino)- 1 -(2-carbamoyl- ethyl)- 1 H-benzoimidazol-2-yl] -amide
Figure imgf000023_0002
5-(4-Amino-phenyl)-thiophene-2-carboxylic acid [5 -(benzoyl-methyl-amino)- 1 -(2- carbamoyl-ethyl)-lH-benzoimidazol-2-yι]- amide
5-Cyclohept- 1 -enyl-thiophene-2-carboxylic acid [5-(benzoyl-methyl-amino)- 1 -(2- carbamoyl-ethyl)- 1 Η-benzoimidazol-2-yl] - amide
Figure imgf000023_0003
acid [5- yl-ethyl)-
Figure imgf000023_0004
5-(2-Amino-thiazol-4-yl)-thiophene-2- carboxylic acid [5-(benzoyl-methyl-amino)-l- (2-carbamoyl-ethyl)- 1 H-benzoimidazol-2-yl] - amide
Figure imgf000023_0005
5-(6-Cyano-pyridin-3-yl)-thiophene-2- carboxylic acid [5-(benzoyl-methyl-amino)-l- (2-carbamoyl-ethyl)-lH-benzoimidazol-2-yl]- amide
5-(2-Fluoro-pyridin-4-yι)-thiophene-2- carboxylic acid [5-(benzoyl-methyl-amino)-l- (2-carbamoyl-ethyl)-lH-benzoimidazol-2-yl]- amide
5-Oxazol-5-yl-thiophene-2-carboxylic acid [5- (benzoyl-methyl-amino)- 1 -(2-carbamoyl-ethyl)- 1 Η-benzoimidazol-2-yl] -amide
5-Biphenyl-4-yl-thiophene-2-carboxylic acid [l-(2-carbamoyl-ethyι)-5-methyl-lH- benzoimidazol-2-yl] -amide
5-{5-[5-(Benzoyl-methyl-amino)-l-(2- carbamoyl-ethyl)- 1 Η-benzoimidazol-2- ylcarbamoyl] -thiophen-2-yl } -pyridine-2- carboxylic acid amide
5-(4-tert-Butyl-phenyl)-thiophene-2-carboxylic acid [5-(benzoyl-methyl-amino)- 1 -(2- carbamoyl-ethyl)- 1 H-benzoimidazol-2-yl] -
Figure imgf000024_0001
amide 5-(5-Cyano-pyridin-3-yl)-thiophene-2- carboxylic acid [5-(benzoyl-methyl-amino)-l- (2-carbamoyl-ethyl)- lH-benzoimidazol-2-yl] - amide
5-(6-Nitro-pyridin-3-yl)-thiophene-2-carboxylic acid {5-(benzoyl-methyl-amino)-l-[3-(2-oxo- pyrrolidin- 1 -yl)-propyl] - 1 H-benzoimidazol-2- yl} -amide
5-(4-Cyclohexyl-phenyl)-thiophene-2- carboxylic acid [5-(benzoyl-methyl-amino)-l- (2-carbamoyl-ethyl)- 1 Η-benzoimidazol-2-yl] -
Figure imgf000025_0001
amide
5 -(6-Fluoro-pyridin-3 -yl)-thiophene-2- carboxylic acid [5-(benzoyl-methyl-amino)-l- (2-carbamoyl-ethyl)-lH-benzoimidazol-2-yl]- amide
5-Pyrazin-2-yl-thiophene-2-carboxylic acid [5- (benzoyl-methyl-amino)- 1 -(2-carbamoyl-ethyl)- 1 Η-benzoimidazol-2-yl] -amide
5-(2-Methoxy-pyrimidin-5-yl)-thiophene-2- carboxylic acid [5-(benzoyl-methyl-amino)-l- (2-carbamoyl-ethyl)-lH-benzoimidazol-2-yl]- amide
Figure imgf000025_0002
5-Thiazol-2-yl-thiophene-2-carboxylic acid [5- (benzoyl-methyl-amino)- l-(2-carbamoyl-ethyl)- lH-benzoimidazol-2-yl]-amide
2-Pyridin-3-yl-thiazole-4-carboxylic acid [5- (benzoyl-methyl-amino)- l-(2-carbamoyl-ethyl)- 1 H-benzoimidazol-2-yl] -amide
2-Pyridin-4-yl-thiazole-4-carboxylic acid [5- (benzoyl-methyl-amino)- l-(2-carbamoyl-ethyl)- 1 H-benzoimidazol-2-yl] -amide
2-Thiophen-2-yl-thiazole-4-carboxylic acid [5- (benzoyl-methyl-amino)- l-(2-carbamoyl-ethyl)- 1 H-benzoimidazol-2-yl] -amide
5-Oxazol-4-yl-thiophene-2-carboxylic acid [5- (benzoyl-methyl-amino)- 1 -(2-carbamoyl-ethyl)- 1 H-benzoimidazol-2-yl] -amide
5-Oxazol-5-yl-thiophene-2-carboxylic acid [5- (benzoyl-methyl-amino)- l-(2R-hy droxyl-2- phenyl-ethyl)- 1 H-benzoimidazol-2-yl] -amide
Figure imgf000026_0001
5-Oxazol-5-yl-thiophene-2-carboxylic acid [5- (3 -cyanobenzoyl-methyl-amino)- 1 -(2R- hydroxyl-2-phenyl-ethyl)-lH-benzoimidazol-2- yl]-amide
5-(2-Cyano-pyridin-4-yl)-thiophene-2- carboxylic acid [5-(benzoyl-methyl-amino)-l- (2-carbamoyl-ethyl)-lH-benzoimidazol-2-yl]- amide
5-(2-Fluoro-pyridin-4-yl)-thiophene-2 r c.aarrVbiroxvvylliirc. a arciidd i {5--f(bhpeτnτz7,novy1l--.mmPe!ttlhwy1l.--aarmino)-l- [3 -(2-oxo-pyrrolidin- 1 -yl)-propyl] - 1 H- benzoimidazol-2-yl} -amide
5-Oxazol-5-yl-thiophene-2-carboxylic acid {5- (benzoyl-methyl-amino)-l-[3-(2-oxo- pyrrolidin- 1 -yl)-propyl] - 1 H-benzoimidazol-2- yl} -amide
5 D--(5D--AAmmiιnnoo--ppyyrπiddimn--3i--yyll)--tthhiιoopphheennee--2-- carboxylic acid [5-(benzoyl-methyl-amino)-l- (2-carbamoyl-ethyl)-lH-benzoimidazol-2-yl]- amide
5-Oxazol-2-yl-thiophene-2-carboxylic acid [5 (benzoyl-methyl-amino)- l-(2-carbamoyl-ethyl)- 1 H-benzoimidazol-2-yl] -amide
Figure imgf000027_0001
5-Pyridin-3-yl-thiophene-2-carboxylic acid {1- (2-carbamoyl-ethyl)-5-[(3-cyano-benzoyl)- methyl-amino] - 1 H-benzoimidazol-2-yl} -amide
5-(2-Methyl-oxazol-4-yl)-thiophene-2- carboxylic acid [5-(benzoyl-methyl-amino)-l- (2-carbamoyl-ethyl)-lH-benzoimidazol-2-yl]- amide
5-Oxazol-5-yl-thiophene-2-carboxylic acid {1- (2-carbamoyl-ethyl)-5-[(3-cyano-benzoyi)- methyl-amino]-lΗ-benzoimidazol-2-yl}-amide
5-(2-Fluoro-pyridin-4-yl)-thiophene-2- carboxylic acid {l-(2-carbamoyl-ethyl)-5-[(3- cy ano-benzoyl)-methyl-amino] - 1 H- benzoimidazol-2-yl } -amide
5 -(5 -Cyano-pyridin-3 -yl)-thiophene-2- carboxylic acid {5-(benzoyl-methyl-amino)-l- [3 -(2-oxo-pyrrolidin- 1 -yl)-propyl] - 1 H- benzoimidazol-2-yl } -amide
5-Pyridin-4-yl-thiophene-2-carboxylic acid [5- (benzoyl-methyl-amino)- 1 -(2R-hydroxyl- 2phenyl-ethyl)- 1 H-benzoimidazol-2-yl] -amide
Figure imgf000028_0001
5-Biphenyl-3 -yl-thiophene-2-carboxylic acid [5-(benzoyl-methyl-amino)- 1 -(2-carbamoyl- ethyl)-lH-benzoimidazol-2-yl]-amide
5 -(5 -Cyano-pyridin-3 -yl)-thiophene-2- carboxylic acid {5-[(3-cyano-benzoyl)-methyl- amino] - 1 - [3 -(2-oxo-pyrrolidin- 1 -yl)-propyl] - 1 H-benzoimidazol-2-yl} -amide
5-(2-Fluoro-pyridin-4-yl)-thiophene-2- carboxylic acid {5-[(3-cyano-benzoyl)-methyl- amino] - 1 - [3 -(2-oxo-pyrrolidin- 1 -yl)-propyl] - 1 H-benzoimidazol-2-yl } -amide
5-Pyridin-3-yl-thiophene-2-carboxylic acid {5- [(3 -cyano-benzoyl)-methyl-amino] - 1 - [3 -(2-oxo- pyrrolidin- 1 -yl)-propyl] - 1 H-benzoimidazol-2- yl} -amide
5-Thiazol-4-yl-thiophene-2-carboxylic acid [5- (benzoyl-methyl-amino)- 1 -(2-carbamoyl-ethyl)- 1 H-benzoimidazol-2-yl] -amide
5-Oxazol-5-yl-thiophene-2-carboxylic acid {5- [(3 -cyano-benzoyl)-methyl-amino] - 1 - [3 -(2-oxo- pyrrolidin-l-yl)-propyl]-lΗ-benzoimidazol-2- yl} -amide
Figure imgf000029_0001
5-(5-Cyano-pyridin-3-yl)-thiophene-2- carboxylic acid [5-(benzoyl-methyl-amino)-l- ((R)-2-hydroxy-2-phenyl-ethyl)- 1 H- benzoimidazol-2-yl] -amide
Figure imgf000030_0001
-
Figure imgf000030_0002
5-(5-Cyano-pyridin-3-yl)-thiophene-2- carboxylic acid [5-[(3-cyano-benzoyl)-methyl- amino]- 1 -((R)-2-hydroxy-2-phenyl-ethyl)- 1 H- benzoimidazol-2-yl] -amide
5 -(5 -Cyano-pyridin-3 -yι)-thiophene-2- carboxylic acid {l-(2-carbamoyl-ethyl)-5-[(3- cyano-benzoyl)-methyl-amino] - 1 H- benzoimidazol-2-yl} -amide
N-[5-(Benzoyl-methyl-amino)-l-(2-carbamoyl- ethyl)- 1 H-benzoimidazol-2-yl] -3 -oxazol-5-yl- benzamide
5-(2-Methoxy-pyrimidin-5-yl)-thiophene-2- carboxylic acid {l-(2-carbamoyl-ethyl)-5-[(3- cyano-benzoyl)-methyl-amino]-lH-
Figure imgf000030_0003
benzoimidazol-2-yl} -amide 5-(2-Methyl-thiazol-4-yl)-thiophene-2- carboxylic acid [5-(benzoyl-methyl-amino)-l- (2-carbamoyl-ethyl)- 1 H-benzoimidazol-2-yl] - amide
5-(2-Fluoro-pyridin-4-yl)-thiophene-2- carboxylic acid [5-(benzoyl-methyl-amino)-l- ((R)-2-hydroxy-2-phenyl-ethyl)- 1 Η- benzoimidazol-2-yl] -amide
5-Oxazol-5-yl-thiophene-2-carboxylic acid {1- ((R)-2-hydroxy-2-phenyl-ethyl)-5-[methyl-(3- methyl-benzoyl)-amino] - 1 H-benzoimidazol-2- yl} -amide
5-Pyridin-3-yl-thiophene-2-carboxylic acid [5- [(3 -cyano-benzoyl)-methyl-amino] - 1 -((R)-2- hydroxy-2-phenyl-ethyι)- 1 H-benzoimidazol-2- yl] -amide
5-Pyridin-4-yl-thiophene-2-carboxylic acid {5- [(3 -cyano-benzoyl)-methyl-amino] - 1 - [3 -(2-oxo- pyrrolidin- 1 -yl)-propyl] - 1 H-benzoimidazol-2- yl} -amide
5-(5-Cyano-pyridin-3-yl)-thiophene-2- carboxylic acid [5-(benzoyl-methyl-amino)-l- (2-dimethylcarbamoy 1-ethyl)- 1 H- benzoimidazol-2-yl] -amide
Figure imgf000031_0001
5-Phenyl-thiophene-2-carboxylic acid [5- (benzoyl-methyl-amino)- 1 -(2- dimethylcarbamoyl-ethyl)- 1 H-benzoimidazol- 2-yl] -amide
5-Pyridin-4-yl-thiophene-2-carboxylic acid [5- [(3 -cyano-benzoyl)-methyl-amino] - 1 -((R)-2- hydroxy-2-phenyl-ethyl)- 1 H-benzoimidazol-2- yl] -amide
5-(2-Fluoro-pyridin-4-yl)-thiophene-2- carboxylic acid [5-[(3-cyano-benzoyl)-methyl- amino]-l-((R)-2-hydroxy-2-phenyl-ethyl)-lH- benzoimidazol-2-yl] -amide
5-Pyridin-3-yl-thiophene-2-carboxylic acid [5- (benzoyl-methyl-amino)- 1 -((R)-2-hydroxy-2- phenyl-ethyl)- 1 H-benzoimidazol-2-yl] -amide
5-Phenyl-[l ,3,4]oxadiazole-2-carboxylic acid [5-(benzoyl-methyl-amino)-l-(2-carbamoyl- ethyl)-lH-benzoimidazol-2-yl]-amide
5-Pyridin-3-yl-thiophene-2-carboxylic acid [5- (benzoyl-methyl-amino)- 1 -(2- dimethylcarbamoyl-ethyl)- 1 H-benzoimidazol- 2-yl] -amide
Figure imgf000032_0001
5-Pyridin-4-yl-thiophene-2-carboxylic acid [5- (benzoyl-methyl-amino)- 1 -(2- dimethylcarbamoyl-ethyl)- 1 H-benzoimidazol- 2-yl] -amide
5-(2-Fluoro-pyridin-4-yl)-thiophene-2- carboxylic acid [5-(benzoyl-methyl-amino)-l- (2-dimethylcarbamoyl-ethyl)- 1 H- benzoimidazol-2-yl] -amide
5-Oxazol-5-yl-thiophene-2-carboxylic acid [5- (benzoyl-methyl-amino)- 1 -(2- dimethylcarbamoyl-ethyl)- 1 H-benzoimidazol- 2-yl] -amide
3 -Phenyl-isoxazole-5 -carboxylic acid [5- (benzoyl-methyl-amino)- 1 -(2-carbamoyl-ethyl)- 1 Η-benzoimidazol-2-yl] -amide
5-Oxazol-5-yl-thiophene-2-carboxylic acid [5- (benzoyl-methyl-amino)- 1 -methyl- 1 H- benzoimidazol-2-yl] -amide
Figure imgf000033_0001
- -
Figure imgf000033_0002
5-Pyridin-4-yl-thiophene-2-carboxylic acid [5- (benzoyl-methyl-amino)- 1 -methyl- 1 H- benzoimidazol-2-yl]-amide
5-Pyridin-4-yl-thiophene-2-carboxylic acid [5- (benzoyl-methyl-amino)- 1 -(2-methoxy-ethyl)- 1 H-benzoimidazol-2-yl] -amide
N-{l-(2-Carbamoyl-ethyl)-2-[2-(5-morpholin- 4-yl-thiophen-2-yl)-2-oxo-ethyl]-lH- benzoimidazol-5-yl}-N-methyl-benzamide
N-(l-(2-Carbamoyl-ethyl)-2-{2-[5-((2R,6S)- 2,6-dimethyl-morpholin-4-yl)-thiophen-2-yl]-2- oxo-ethyl}-lH-benzoimidazol-5-yl)-N-methyl- benzamide
N-[2-{2-[5-(4-Acetyl-piperazm-l-yl)-thiophen- 2-yl]-2-oxo-ethyl}-l-(2-carbamoyl-ethyl)-lH- benzoimidazol-5-yl]-N-methyl-benzamide
N-[2-[2-(3-Amino-5-ρyridin-3-yl-thioρhen-2- yl)-2-oxo-ethyl]-l-(2-carbamoyl-ethyl)-lH- benzoimidazol-5-yl]-N-methyl-benzamide
Figure imgf000034_0001
Figure imgf000035_0001
N-{l-(2-Carbamoyl-ethyl)-2-[2-oxo-2-(5- piperazm-l-yl-thiophen-2-yl)-ethyl]-lH- benzoimidazol-5-yl}-N-methyl-benzamide
Figure imgf000035_0002
-
Figure imgf000035_0003
N-(l-(2-Carbamoyl-ethyl)-2-{2-[5-(4-methyl- piperazin- 1 -yl)-thiophen-2-yl]-2-oxo-ethyl} - lH-benzoimidazol-5-yl)-N-methyl-benzamide
N-{l-(2-Carbamoyl-ethyl)-2-[2-oxo-2-(5- pyrrolidm-l-yl-thiophen-2-yl)-ethyl]-lH- benzoimidazol-5-yl}-N-methyl-benzamide
N-{ l-(2-Carbamoyl-ethyl)-2-[2-oxo-2-(5- piperidin-l-yl-thiophen-2-yl)-ethyl]-lH- benzoimidazol-5-yl}-N-methyl-benzamide
Figure imgf000035_0004
N-Methyl-N-[2-[2-(5-oxazol-5-yl-thiophen-2- yl)-2-oxo-ethyl]-l-(2-pyridin-3-yl-ethyl)-lH- benzoimidazol-5 -yl] -benzamide
N-[2-{2-[5-(2-Fluoro-pyridin-4-yl)-thiophen-2- yl]-2-oxo-ethyl}-l-(2-pyridin-3-yl-ethyl)-lH- benzoimidazol-5-yl]-N-methyl-benzamide
3-Cyano-N-methyl-N-[2-[2-oxo-2-(5-pyridin-3- yl-thiophen-2-yl)-ethyl]-l-(2-pyridin-3-yl- ethyl)-lH-benzoimidazol-5-yl]-benzamide
N-Methyl-N-[2-[2-oxo-2-(5-pyridin-3-yl- thiophen-2-yl)-ethyl]-l-(2-pyridin-3-yl-ethyl)- 1 H-benzoimidazol-5 -yl] -benzamide
N-[2-{2-[5-(5-Cyano-pyridin-3-yl)-thiophen-2- yl]-2-oxo-ethyl}-l-(2-ρyridm-3-yl-ethyl)-lH- benzoimidazol-5 -yl] -N-methyl-benzamide
5-(2-Fluoro-pyridm-4-yl)-thiophene-2- carboxylic acid [5-[(3-cyano-benzoyl)-methyl- amino]-l-(2-pyridin-3-yl-ethyl)-lH- benzoimidazol-2-yl] -amide
Figure imgf000036_0001
5-Pyridin-4-yl-thiophene-2-carboxylic acid [5- [(3-cyano-benzoyl)-methyl-amino]-l-(2- pyridin-3 -yl-ethyl)- 1 H-benzoimidazol-2-yl] - amide
5-(5-Cyano-pyridin-3-yl)-thiophene-2- carboxylic acid [5-[(3-cyano-benzoyl)-methyl- amino] - 1 -(2-pyridin-3 -yl-ethyl)- 1 H- benzoimidazol-2-yl] -amide
5-(4-Hydroxy-piperidin- 1 -yι)-thiophene-2- carboxylic acid [5-(benzoyl-methyl-amino)-l- (2-carbamoyl-ethyl)- 1 H-benzoimidazol-2-yl] - amide
5-Oxazol-5-yl-thiophene-2-carboxylic acid [5- [(3 -cyano-benzoyl)-methyl-amino] - 1 -(2- pyridin-3 -yl-ethyl)- 1 H-benzoimidazol-2-yl] - amide
5-(3-Nitro-phenyl)-furan-2-carboxylic acid [5- (benzoyl-methyl-amino)- 1 -(2-carbamoyl-ethyl)- 1 H-benzoimidazol-2-yl] -amide
5-(3-Amino-phenyl)-furan-2-carboxylic acid [5- (benzoyl-methyl-amino)- 1 -(2-carbamoyl-ethyl)- 1 H-benzoimidazol-2-yl] -amide
5-(3-Acetylamino-phenyl)-furan-2-carboxylic acid [5-(benzoyl-methyl-amino)-l-(2- carbamoyl-ethyl)-lH-benzoimidazol-2-yl]- amide
Figure imgf000037_0001
or the pharmaceutically acceptable salts, esters, acids, isomers or tautomers thereof.
In another embodiment there is provided representative compounds of the invention which can be made in accordance with the general schemes and working examples presented below: Table I 5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid [5-(benzoyl-methyl-amino)- 1 -(2-methylamino-ethyl)- 1 H-benzoimidazol- 2-yl] -amide
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid {5-(benzoyl-methyl-amino)- l-[2-(4-methyl-piperazin-l-yl)-ethyl]-lH- benzoimidazol-2-yl}-amide
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid [5-(benzoyl-methyl-amino)- l-(2-isopropylamino-ethyl)-lH- benzoimidazol-2-yl] -amide
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid [5-(benzoyl-methyl-amino)- l-(2-tert-butylamino-ethyl)-lH- benzoimidazol-2-yl] -amide
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid {5-(benzoyl-methyl-amino)- l-[2-(3-hydroxy-azetidin-l-yl)-ethyl]-lH- benzoimidazol-2-yl} -amide
Figure imgf000038_0001
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid [5-(benzoyl-methyl-amino)- l-(2-piperidin-l-yl-ethyl)-lH-benzoimidazol- 2-yl] -amide
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid [5-(benzoyl-methyl-amino)- 1 -(2-pyrrolidin- 1 -yl-ethyl)- 1H- benzoimidazol-2-yl] -amide
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid [5-(benzoyl-methyl-amino)- l-(2-ethylammo-ethyl)-lH-benzoimidazol-2- yl] -amide
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid [5-{[(2-dimethylamino- ethyl)-methyl-amino]-methyl}-l-(2-hydroxy- 2-methyl-propyl)- 1 H-benzoimidazol-2-yl] - amide
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid [5-{[(3-dimethylamino- propyl)-methyl-amino] -methyl} - 1 -(2- hydroxy-2-methyl-propyl)- 1 H- benzoimidazol-2-yl] -amide
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid [5-[(3-dimethylamino- propylamino)-methyl]- 1 -(2-hydroxy-2- methyl-propyl)-lH-benzoimidazol-2-yl]- amide
Figure imgf000039_0001
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid (5-(benzoyl-methyl-amino)- l-[2-(3-hydroxy-pyrrolidin-l-yl)-ethyl]-lH- benzoimidazol-2-yl} -amide
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid [l-(2-hydroxy-2-methyl- propyl)-5-piperidin-l-ylmethyl-lH- benzoimidazol-2-yl] -amide
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid [5-(benzoyl-methyl-amino)- 1 -(2-dimethylamino-ethyl)- 1H- benzoimidazol-2-yl] -amide
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid (l-(2-hydroxy-2-methyl- propyl)-5- { [3-(4-methyl-piperazin- 1 -yl)- propylamino]-methyl}-lH-benzoimidazol-2- yl)-amide
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid [5-[(4-dimethylamino butylamino)-me ..+th.1y71l1]-- 1l- n(2.-ιh,,yjd.roxy »r-_02-methyl- propyl)-lH-benzoimidazol-2-yl]-amide
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid [5-[(2-dimethylamino- ethylamino)-methyl]-l-(2~hydroxy-2-methyl- propyl)- 1 H-benzoimidazol-2-yl] -amide
Figure imgf000040_0001
3-{[(l-(2-Hydroxy-2-methyl-ρroρyl)-2-{[5- (2-methyl-oxazol-5-yl)-thiophene-2- carbonyl]-amino}-lH-benzoimidazol-5- ylmethyl)-amino] -methyl } -piperidine- 1 - carboxylic acid tert-butyl ester
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid (l-(2-hydroxy-2-methyl- propyl)-5-{[(piperidin-3-ylmethyl)-amino]~ methyl} - lH-benzoimidazol-2-yl)-amide
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid [5-(4-acetyl-piperazin-l- ylmethyl)- 1 -(2-hydroxy-2-methyl-propyl)- 1 H-benzoimidazol-2-yl] -amide
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid [l-(2-hydroxy-2-methyl- propyl)-5-methoxy-lH-benzoimidazol-2-yl]- amide
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid [5-hydroxy-l-(2-hydroxy-2- methyl-propyl)-lH-benzoimidazol-2-yl]- amide
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid [5-[(cyclohexyl-methyl- amino)-methyl]-l-(2-hydroxy-2-methyl- propyl)-lH-benzoimidazol-2-yl]-amide
Figure imgf000041_0001
5-(2-Methyl-oxazol-5-yι)-thiophene-2- carboxylic acid [5-cyclohexylaminomethyl- 1 -(2-hydroxy-2-methyl-propyl)- 1H- benzoimidazol-2-yl] -amide
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid [l-(2-hydroxy-2-methyl- propyl)-5-phenylaminomethyl-lH- benzoimidazol-2-yl] -amide
Morpholine-4-carboxylic acid (l-(2-hydroxy- 2-methyl-propyl)-2-{[5-(2-methyl-oxazol-5- yl)-thiophene-2-carbonyl]-amino}-lH- benzoimidazol-5-yl)-methyl-amide
4-Methyl-piperazine-l -carboxylic acid (l-(2- hydroxy-2-methyl-propyl)-2- { [5-(2-methyl- oxazol-5-yl)-thiophene-2-carbonyl]-amino}- lH-benzoimidazol-5-yl)-methyl-amide
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid {l-(2-hydroxy-2-methyl- propyl)-5-[(l,2,2-trimethyl-propylamino)- methyl] - 1 H-benzoimidazol-2-yl } -amide
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid [5-[(2-hydroxy-ethylamino)- methyl]- 1 -(2-hydroxy-2-methyl-propyι)- 1H- benzoimidazol-2-yl] -amide
Figure imgf000042_0001
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid {l-(2-hydroxy-2-methyl- propyl)-5-[(3-hydroxy-propylamino)- methyl] - 1 H-benzoimidazol-2-yl} -amide
Figure imgf000043_0001
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid {l-(2-hydroxy-2-methyl- propyl)-5-[(3-methoxy-propylamino)- methyl]-lH-benzoimidazol-2-yl}-amide
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid (l-(2-hydroxy-2-methyl- propyl)-5-{[(2-methoxy-ethyl)-methyl- amino] -methyl } - 1 H-benzoimidazol-2-yl)- amide
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid [l-(2-hydroxy-2-methyl- propyl)-5-(3-hydroxy-pyrrolidin-l- ylmethyl)-lH-benzoimidazol-2-yl]-amide
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid {l-(2-hydroxy-2-methyl- propyl)-5-[(methyl-phenyl-amino)-methyl]- lH-benzoimidazol-2-yl} -amide
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid [5-[(2-dimethylamino- acetyl)-methyl-amino]- 1 -(2-hydroxy-2- methyl-propyl)- 1 H-benzoimidazol-2-yl] - amide
Figure imgf000043_0002
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid [l-(2-hydroxy-2-methyl- propyl)-5-(3-hydroxy-piperidin-l- ylmethyl)- 1 H-benzoimidazol-2-yl] -amide
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid [l-(2-hydroxy-2-methyl- propyl)-5-morpholin-4-ylmethyl-lH- benzoimidazol-2-yl] -amide
5-(lH-Pyrazol-4-yl)-thiophene-2-carboxylic acid [1 -(2-hydroxy-2-methyl-propyl)-5- methylamino- 1 H-benzoimidazol-2-y 1] - amide
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid [5-(2-dimethylamino- ethoxy)- 1 -(2-hydroxy-2-methyl-propyl)- 1H- benzoimidazol-2-yl] -amide
5-(2-Methyl-oxazol-5-yι)-thiophene-2- carboxylic acid {l-(2-hydroxy-2-methyl- propyl)-5-[(2-methoxy-ethylamino)-methyl]- 1 H-benzoimidazol-2-yl } -amide
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid [5-[(4-hydroxy-butylamino)- methyl]-l-(2-hydroxy-2-methyl-propyl)-lH- benzoimidazol-2-yl] -amide
Figure imgf000044_0001
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid [5-[(l,2-dimethyl- propylamino)-methyl]-l-(2-hydroxy-2- methyl-propyl)-lH-benzoimidazol-2-yl]- amide
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid {l-(2-hydroxy-2-methyl- propyl)-5-[methyl-(2-morpholin-4-yl- acetyl)-amino]- lH-benzoimidazol-2-yl} - amide
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid {l-(2-hydroxy-2-methyl- propyl)-5-[((R)-l ,2,2-trimethyl- propylamino)-methyl]-lH-benzoimidazol-2- yl} -amide 5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid { 1 -(2-hydroxy-2-methyl- propyl)-5-[((S)-l,2,2-trimethyl- propylamino)-methyl]-lH-benzoimidazol-2- yl} -amide
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid [l-(2-hydroxy-2-methyl- ρropyl)-5-(isopropylamino-methyl)-lH- benzoimidazol-2-yl] -amide
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid [5-(tert-butylamino-methyl)- l-(2-hydroxy-2-methyl-ρroρyι)-lH- benzoimidazol-2-yl] -amide
Figure imgf000045_0001
5-(2-Methyl-thiazol-4-yl)-isoxazole-3- carboxylic acid [5-(benzoyl-methyl-amino)- 1 -(2-carbamoyl-ethyl)- 1 H-benzoimidazol-2- yl] -amide
Figure imgf000046_0001
3-Phenyl-isoxazole-5-carboxylic acid [5- (benzoyl-methyl-amino)- 1 -(2-carbamoyl- ethyl)- 1 H-benzoimidazol-2-yl] -amide
5-Oxazol-5-yl-thiophene-2-carboxylic acid [5-(benzoyl-methyl-amino)-l-(2-pyridin-2- yl-ethyl)-lH-benzoimidazol-2-yl]-amide
N-[5-(Benzoyl-methyl-amino)-l-(2-pyridin- 2-yl-ethyl)- 1 H-benzoimidazol-2-yl] -3 - oxazol-5 -yl-benzamide
5-(2-Fluoro-pyridin-4-yl)-thiophene-2- carboxylic acid [5-(benzoyl-methyl-amino)- 1 -(2-pyridin-2-yl-ethyl)- 1 #H ! - benzoimidazol-2-yl] -amide
5 -Pyridin-4-yl-thiophene-2-carboxylic acid [5 -(benzoyl-methyl-amino)- 1 -(2-pyridin-2- yl-ethyl)- 1 H-benzoimidazol-2-yl] -amide
Figure imgf000046_0002
5-Oxazol-5-yl-thiophene-2-carboxylic acid {5-(benzoyl-methyl-amino)-l-[2-(2- methoxy-phenyl)-ethyl] - 1 H-benzoimidazol- 2-yl} -amide
5-Oxazol-5-yl-thiophene-2-carboxylic acid [5 -(benzoyl-methyl-amino)- 1 -pyridin-3 - ylmethyl- 1 H-benzoimidazol-2-yl] -amide
Figure imgf000047_0001
5-Oxazol-5-yl-thiophene-2-carboxylic acid [5 -(benzoyl-methyl-amino)- 1 -pyridin-2- ylmethyl- 1 H-benzoimidazol-2-yι] -amide
5-Oxazol-5-yl-thiophene-2-carboxylic acid [5 -(benzoyl-methyl-amino)- 1 -benzyl- 1 H- benzoimidazol-2-yl] -amide
Figure imgf000047_0002
5-Oxazol-5-yl-thiophene-2-carboxylic acid [5-[methyl-(2,2,2-trifluoro-acetyl)-amino]- 1 -(2-pyridin-3 -yl-ethyl)- 1 H-benzoimidazol- 2-yl] -amide
Figure imgf000047_0003
5-Oxazol-5-yl-thiophene-2-carboxylic acid [5-methylamino-l-(2-pyridin-3-yl-ethyl)- 1 H-benzoimidazol-2-yl] -amide
5-Oxazol-5-yl-thiophene-2-carboxylic acid [5-(benzoyl-methyl-amino)- 1 H- benzoimidazol-2-yl] -amide
5-Oxazol-5-yl-thiophene-2-carboxylic acid [5-(acetyl-methyl-amino)-l-(2-pyridin-3-yl- ethyl)- 1 H-benzoimidazol-2-yl] -amide
Figure imgf000048_0001
H Vπ 5-Oxazol-5-yl-thiophene-2-carboxylic acid 'V [5 -( 1 -methyl-3 -phenyl-ureido)- 1 -(2-pyridin- o xx N H 3 -yl-ethyl)- 1 H-benzoimidazol-2-yl] -amide
5-Oxazol-5-yl-thiophene-2-carboxylic acid [5-[(4-fluoro-benzoyl)-methyl-amino]- 1 -(2- pyridin-3 -yl-ethyl)- 1 H-benzoimidazol-2- yl]-amide 5 -Oxazol-5 -yl-thiophene-2-carboxylic acid [5-(benzenesulfonyl-methyl-amino)-l-(2- pyridin-3 -yl-ethyl)- 1 H-benzoimidazol-2- yl] -amide
Figure imgf000048_0003
Figure imgf000049_0001
Figure imgf000050_0001
Figure imgf000051_0001
Figure imgf000052_0001
Figure imgf000053_0001
Figure imgf000054_0001
1 -
Figure imgf000055_0001
Figure imgf000056_0001
Figure imgf000057_0001
-
Figure imgf000058_0001
Figure imgf000059_0001
Tetrahydro-furan-3 -carboxylic acid methyl- [2-{[5-(lH-pyrazol-4-yl)-thiophene-2- carbonyl] -amino } - 1 -(2-pyridin-2-yl-ethyl)- lH-benzoimidazol-5-yl]-amide
Tetrahydro-pyran-4-carboxylic acid methyl- [2-{[5-(lH-ρyrazol-4-yl)-thiophene-2- carbonyl] -amino } - 1 -(2-pyridin-2-yl-ethyl)- 1 H-benzoimidazol-5 -yl] -amide
Pyridine-2-carboxylic acid methyl-[2-{[5- ( 1 H-pyrazol-4-yl)-thiophene-2-carbonyl] - amino } - 1 -(2-pyridin-2-yl-ethyl)- 1 H- benzoimidazol-5 -yl] -amide
N-Methyl-N-[2-{[5-(lH-pyrazol-4-yl)- thiophene-2-carbonyl] -amino } - 1 -(2-pyridin- 2-yl-ethyl)-lH-benzoimidazol-5-yl]- nicotinamide
Pyridine-2-carboxylic acid (l-(2-hydroxy-2- methyl-propyl)-2-{[5-(lH-pyrazol-4-yl)- thiophene-2-carbonyl] -amino} - 1 H- benzoimidazol-5-yl)-methyl-amide
N-(l-(2-Hydroxy-2-methyl-proρyl)-2-{[5- ( 1 H-pyrazol-4-yl)-thiophene-2-carbonyl] - amino}-lH-benzoimidazol-5-yl)-N-methyl- nicotinamide
Figure imgf000060_0001
Figure imgf000061_0001
Figure imgf000062_0001
Figure imgf000063_0001
Figure imgf000064_0001
Figure imgf000065_0001
Figure imgf000066_0001
5-Oxazol-5-yl-thiophene-2-carboxylic acid [5 -(benzoyl-methyl-amino)- 1 -((R)-2- hydroxy-2-pyridin-3 -yl-ethyl)- 1 H- benzoimidazol-2-yl] -amide
Figure imgf000067_0001
5-Oxazol-5-yl-thiophene-2-carboxylic acid [5-(benzoyl-methyl-amino)- 1 -(2- dimethylsulfamoyl-ethyl)- 1 H- benzoimidazol-2-yl] -amide
5-(2H-Pyrazol-3-yl)-thiophene-2-carboxylic acid [5-(benzoyl-methyl-amino)-l -(2- pyridin-3 -yl-ethyl)- 1 H-benzoimidazol-2- yl] -amide
5-Oxazol-5-yl-thiophene-2-carboxylic acid [5-(benzoyl-methyl-amino)- 1 -(2- methylsulfamoyl-ethyl)- 1 H-benzoimidazol- 2-yl] -amide
Figure imgf000067_0002
5 -Isoxazol-3 -yl-thiophene-2-carboxylic acid [5 -(benzoyl-methyl-amino)- 1 -(2-pyridin-3 - yl-ethyl)-lH-benzoimidazol-2-yl]-amide
Figure imgf000067_0003
5-Isothiazol-5-yl-thiophene-2-carboxylic acid [5 -(benzoyl-methyl-amino)- 1 -(2- pyridin-3 -yl-ethyl)- 1 H-benzoimidazol-2- yl] -amide
Figure imgf000068_0001
Figure imgf000069_0001
Figure imgf000070_0001
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid [5-(benzoyl-methyl-amino)- 1 -(2-hydroxy-2-methyl-propyl)- 1 H- benzoimidazol-2-yl] -amide
5 -Isoxazol-3 -yl-thiophene-2-carboxylic acid [5-(benzoyl-metl yl-amino)- 1 -(2-hydroxy-2- methyl-propyl)- 1 H-benzoimidazol-2-yl] - amide
Figure imgf000071_0001
5 -Isothiazol-3 -yl-thiophene-2-carboxylic acid [5-(benzoyl-methyl-amino)-l-(2- hydroxy-2-methyl-propyl)- 1 H- benzoimidazol-2-yl] -amide
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid [5-(benzoyl-methyl-amino)- 1 -(2-methylcarbamoyl-ethyl)- 1 H- benzoimidazol-2-yl] -amide
5 -Oxazol-5 -yl-thiophene-2-carboxylic acid [5-(benzoyl-methyl-amino)-l-(2- methylcarbamoyl-ethyl)- 1 H-benzoimidazol- 2-yl] -amide
3 - { 5 -(Benzoyl-methyl-amino)-2- [(5 -oxazol- 5-yl-thiophene-2-carbonyl)-amino]- benzoimidazol- 1 -yl} -2-hydroxy-propionic acid methyl ester
Figure imgf000071_0002
Figure imgf000072_0001
Figure imgf000073_0001
Figure imgf000074_0001
Figure imgf000075_0001
Figure imgf000076_0001
Figure imgf000077_0001
Figure imgf000078_0001
Figure imgf000079_0001
Figure imgf000080_0001
Figure imgf000081_0001
Figure imgf000082_0001
Figure imgf000083_0001
Figure imgf000084_0001
Figure imgf000085_0001
Figure imgf000086_0001
Figure imgf000087_0001
Figure imgf000088_0001
5-(2-Fluoro-pyridin-4-yl)-thiophene-2- carboxylic acid [5-(benzoyl-methyl-amino)- 1 -(2-hydroxy-2-methyl-propyl)- 1 H- benzoimidazol-2-yl] -amide
5-Oxazol-5-yl-thiophene-2-carboxylic acid [5-[methyl-(3-trifluoromethyl-benzoyl)- amino] - 1 -(2-pyridin-3 -yl-ethyl)- 1 H- benzoimidazol-2-yl] -amide
Figure imgf000089_0001
5-Oxazol-5-yl-thiophene-2-carboxylic acid [5-[(3-fluoro-benzoyl)-methyl-amino]- 1 -(2- pyridin-3 -yl-ethyl)- 1 H-benzoimidazol-2- yl] -amide
Figure imgf000089_0002
5-Oxazol-5-yl-thiophene-2-carboxylic acid [5 - [(3 ,4-difluoro-benzoyl)-methyl-amino] - 1 -(2-pyridin-3 -yl-ethyl)- 1 H-benzoimidazol- 2-yl] -amide
5-Oxazol-5-yl-thiophene-2-carboxylic acid [5-[(4-cyano-benzoyl)-methyl-amino]-l-(2- pyridin-3 -yl-ethyl)- 1 H-benzoimidazol-2- yl] -amide
Figure imgf000089_0003
Figure imgf000090_0001
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid [l-(2-hydroxy-2-methyl- propyl)-5-(methyl-propionyl-amino)- 1 H- benzoimidazol-2-yl] -amide
Figure imgf000091_0001
5-Qxazol-5-yl-thiophene-2-carboxylic acid [5-(benzoyl-methyl-amino)- 1 -(1 -hydroxy- cyclopropylmethyl)- 1 H-benzoimidazol-2- yl] -amide
5-(2-Fluoro-pyridin-4-yl)-thiophene-2- carboxylic acid [5-(benzoyl-methyl-amino)- 1 -(1 -hydroxy-cyclopropylmethyl)- 1 H- benzoimidazol-2-yl] -amide
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid [5-(benzoyl-methyl-amino)- 1 -(3 -hydroxy-butyl)- 1 H-benzoimidazol-2- yl] -amide
5-Oxazol-5-yl-thiophene-2-carboxylic acid { 5 -(benzoyl-methyl-amino)- 1 - [2-( 1 -oxy- pyridin-3 -yl)-ethyl] - 1 H-benzoimidazol-2- yl} -amide
N-(l -(2-Hydroxy-2-methyl-ρropyl)-2- { [5- (2-methyl-oxazol-5-yl)-thiophene-2- carbonyl] -amino } - 1 H-benzoimidazol-5 -yl)- N-methyl-isonicotinamide
Pyridine-2-carboxylic acid (l-(2-hydroxy-2- methyl-propyl)-2-{[5-(2-methyl-oxazol-5- yl)-thiophene-2-carbonyl] -amino } - 1 H- benzoimidazol-5-yl)-methyl-amide
Figure imgf000091_0002
Figure imgf000092_0001
Figure imgf000093_0001
5-(2-Fluoro-pyridin-4-yl)-thiophene-2- carboxylic acid {l-(2-hydroxy-2-methyl- propyl)-5-[methyl-(2,2,2-trifluoro-acetyl)- amino] - 1 H-benzoimidazol-2-yl } -amide
5-(2-Fluoro-pyridm-4-yl)-thiophene-2- carboxylic acid {l-(2-hydroxy-2-methyl- propyl)-5-[(2-methoxy-acetyl)-methyl- amino] - 1 H-benzoimidazol-2-yl} -amide
5-(2-Methoxy-pyridin-4-yl)-thiophene-2- carboxylic acid [5-(benzoyl-methyl-amino)- 1 -(2-hydroxy-2-methyl-propyl)- 1 H- benzoimidazol-2-yl] -amide
5-Oxazol-5-yl-thiophene-2-carboxylic acid [5- { [2-(2-methoxy-ethoxy)-acetyl]-methyl- amino } - 1 -(2-pyridin-3 -yl-ethyl)- 1 H- benzoimidazol-2-yl] -amide
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid {l-(3-hydroxy-3-methyl- butyl)-5-[(2-methoxy-acetyl)-methyl- amino] - 1 H-benzoimidazol-2-yl } -amide
5-(lH-Pyrazol-4-yl)-thiophene-2-carboxylic acid [5-[(2-methoxy-acetyl)-methyl-amino]- 1 -(2-morpholin-4-yl-ethyl)- 1 H- benzoimidazol-2-yl] -amide
Figure imgf000094_0001
Figure imgf000095_0001
Figure imgf000096_0001
Figure imgf000097_0001
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid [5-(benzoyl-methyl-amino)- 1 -(3 -morpholin-4-yl-3 -oxo-propyl)- 1 H- benzoimidazol-2-yl] -amide
Pyridine-2-carboxylic acid methyl-[2-{[5- (2-methyl-oxazol-5-yl)-thiophene-2- carbonyl]-amino}-l-(2-pyridin-2-yl-ethyl)- lH-benzoimidazol-5-yl]-amide
5 -Pyridin-4-yl-thiophene-2-carboxylic acid [5 -(benzoyl-methyl-amino)- 1 -(2- dimethylcarbamoyl-ethyl)- 1 H- benzoimidazol-2-yl] -amide
5-Oxazol-5-yl-thiophene-2-carboxylic acid [5-(benzoyl-methyl-amino)- 1 -(2- dimethylcarbamoyl-ethyl)- 1 H- benzoimidazol-2-yl] -amide
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid [5-(benzoyl-methyl-amino)- 1 -(2-carbamoyl-ethyl)- 1 H-benzoimidazol-2- yl] -amide
5 -Pyridin-4-yl-thiophene-2-carboxylic acid {l-(2-carbamoyl-ethyl)-5-[(3-cyano- benzoyl)-methyl-amino]-lH- benzoimidazol-2-yl} -amide
Figure imgf000098_0001
N- [5-(Benzoyl-methyl-amino)- 1 -(2-pyridin- 3 -yl-ethyl)- 1 H-benzoimidazol-2-yl] -3 - oxazol-5-yl-benzamide
2-Phenyl-thiazole-5 -carboxylic acid [5- (benzoyl-methyl-amino)- 1 -(2-carbamoyl- ethyl)- 1 H-benzoimidazol-2-yl] -amide
2-Pyridin-4-yl-thiazole-5-carboxylic acid [5 -(benzoyl-methyl-amino)- 1 -(2-carbamoyl- ethyl)- 1 H-benzoimidazol-2-yl] -amide
N- [5-(Benzoyl-methyl-amino)- 1 -(2-pyridin- 3 -yl-ethyl)- 1 H-benzoimidazol-2-yl] -3 - pyridin-4-yl-benzamide
2-Pyridin-4-yl-thiazole-4-carboxylic acid [5-(benzoyl-methyl-amino)- 1 -(2-pyridin-3- yl-ethyl)-lH-benzoimidazol-2-yl]-amide
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid {5-(benzoyl-methyl-amino)- 1 - [3 -(2-oxo-pyrrolidin- 1 -yl)-propyl] - 1 H- benzoimidazol-2-yl} -amide
Figure imgf000099_0001
Figure imgf000100_0001
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid [5-(benzoyl-methyl-amino)- 1 -(2-hydroxy-2-methyl-propyl)- 1 H- benzoimidazol-2-yl] -amide
4-Methyl-2-pyridin-4-yl-thiazole-5- carboxylic acid [5-(benzoyl-methyl-amino)- 1 -(2-hydroxy-2-methyl-propyl)- 1 H- benzoimidazol-2-yl] -amide
Figure imgf000101_0001
4-Methyl-2-pyridin-3 -yl-thiazole-5 - carboxylic acid [5-(benzoyl-methyl-amino)- 1 -(2-hydroxy-2-methyl-propyl)- 1 H- benzoimidazol-2-yl] -amide
4-Methyl-2-pyridin-4-yl-thiazole-5- carboxylic acid [5-(benzoyl-methyl-amino)- 1 -(2-carbamoyl-ethyl)- 1 H-benzoimidazol-2 - yl] -amide
4-Methyl-2-pyridin-3-yl-thiazole-5- carboxylic acid [5-(benzoyl-methyl-amino)- 1 -(2-carbamoyl-ethyl)- 1 H-benzoimidazol-2- yl]-amide
5-(2-Methyl-oxazol-5-yι)-thiophene-2- carboxylic acid [5-(benzoyl-methyl-amino)- l-((R)-2-hydroxy-ρroρyl)-lH- benzoimidazol-2-yl] -amide
Figure imgf000101_0002
5-Oxazol-5-yl-thiophene-2-carboxylic acid [5 -(3 -isopropyl- 1 -methyl-ureido)- 1 -(2- pyridin-3 -yl-ethyl)- 1 H-benzoimidazol-2- yl] -amide
5-Oxazol-5-yl-thiophene-2-carboxylic acid [5-(3 -tert-butyl- 1 -methyl-ureido)- 1 -(2- pyridin-3 -yl-ethyl)- 1 H-benzoimidazol-2- yl] -amide
Figure imgf000102_0001
5-Oxazol-5-yl-thiophene-2-carboxylic acid CH, // [5 -(3 -cyclopentyl- 1 -methyl-ureido)- 1 -(2-
<X Ή pyridin-3 -yl-ethyl)- 1 H-benzoimidazol-2- OS yl]-amide
5-Oxazol-5-yl-thiophene-2-carboxylic acid [5-(3 -cyclohexyl- 1 -methyl-ureido)- 1 ~(2- pyridin-3 -yl-ethyl)- 1 H-benzoimidazol-2- yl] -amide
Figure imgf000102_0002
5 -Oxazol-5 -yl-thiophene-2-carboxylic acid [5 - [3 -(4-fluoro-phenyl)- 1 -methyl-ureido] - 1 - (2-pyridin-3 -yl-ethyl)- 1 H-benzoimidazol-2- \ OS yl] -amide
5-Oxazol-5-yl-thiophene-2-carboxylic acid [5 - [3 -(3 -cyano-phenyl)- 1 -methyl-ureido] - 1 - (2-pyridin-3 -yl-ethyl)- 1 H-benzoimidazol-2- yl] -amide
Figure imgf000102_0003
-
Figure imgf000103_0001
Figure imgf000104_0001
Figure imgf000105_0001
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid [5-bromo-l-(2-hydroxy-2- methyl-propyl)- 1 H-benzoimidazol-2-yl] - amide
5-(2-Methyl~oxazol-5-yι)-thiophene-2- carboxylic acid [5-benzenesulfonylamino-l- (2-hydroxy-2-methyl-propyι)- 1 H- benzoimidazol-2-yl] -amide
Figure imgf000106_0001
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid [5-(3-cyano- benzenesulfonylamino)- 1 -(2-hydroxy-2- methyl-propyl)- 1 H-benzoimidazol-2-yl] - amide
5-(lH-Pyrazol-4-yl)-thiophene-2-carboxylic acid { l-(2-hydroxy-2-methyl-propyl)-5-[(2- methoxy-acetyl)-methyl-amino]-lH- benzoimidazol-2-yl} -amide
5-(lH-Pyrazol-4-yl)-thiophene-2-carboxylic acid [5-(acetyl-methyl-amino)-l -(2- hydroxy-2-methyl-propyl)- 1 H- benzoimidazol-2-yl] -amide
5-( 1 H-Pyrazol-4-yl)-thiophene-2-carboxylic acid [5 - [(3 -cyano-benzoy l)-methyl-amino] - 1 -(2-hydroxy-2-methyl-propyl)- 1 H- benzoimidazol-2-yl] -amide
5-(2-Methyl-oxazol-5-yl)-thiophene-2- carboxylic acid [l-(2-hydroxy-2-methyl- propyl)-5-(2-oxo-pyrrolidin- 1 -yl)- 1 H- benzoimidazol-2-yl] -amide
Figure imgf000106_0002
Figure imgf000107_0001
Figure imgf000108_0001
Figure imgf000109_0001
or the pharmaceutically acceptable salts, esters, acids, isomers or tautomers thereof. Any of the aforementioned embodiments disclosed above may have Ra, Rb or Rc also being defined as azido. Such compounds are useful as photolabeling probes and include, for example, 4-azido-phenyl moieties.
In all the compounds disclosed herein above in this application, in the event the nomenclature is in conflict with the structure, it shall be understood that the compound is defined by the structure.
The invention includes the use of any compounds described above containing one or more asymmetric carbon atoms which may occur as racemates and racemic mixtures, single enantiomers, diastereomeric mixtures and individual diastereomers. All such isomeric forms of these compounds are expressly included in the present invention. Each stereogenic carbon may be in the R or S configuration, or a combination of configurations.
Of particular importance according to the invention are compounds of formula (I), wherein Ari, Ar2, Ri, R2, R3, R4 and Xa have the meaning indicated, for use as pharmaceutical compositions with an anti-Tec kinase activity.
The invention also relates to the use of a compound of formula (I), wherein Ari, Ar2, Ri, R2, R3, R4 and Xa have the meaning indicated, for preparing a pharmaceutical composition for the treatment and/or prevention of a Tec kinase mediated disease or condition..
The invention also relates to pharmaceutical preparations, containing as active substance one or more compounds of formula (I), wherein Ari, Ar2, Ri, R2, 3> 4 and Xa have the meanings indicated, or the pharmaceutically acceptable derivatives thereof, optionally combined with conventional excipients and/or carriers.
Compounds of the invention also include their isotopically-labelled forms. An isotopically-labelled form of an active agent of a combination of the present invention is identical to said active agent but for the fact that one or more atoms of said active agent have been replaced by an atom or atoms having an atomic mass or mass number different from the atomic mass or mass number of said atom which is usually found in nature. Examples of isotopes which are readily available commercially and which can be incorporated into an active agent of a combination of the present invention in accordance with well established procedures, include isotopes of hydrogen, carbon, nitrogen, oxygen, phosphorous, fluorine and chlorine, e.g., 2H, 3H, 13C, 14C, 15N, 180, 170, 31P, 32P, 35S, 18F, and 36C1, respectively. An active agent of a combination of the present invention, a prodrug thereof, or a pharmaceutically acceptable salt of either which contains one or more of the above-mentioned isotopes and/or other isotopes of other atoms is contemplated to be within the scope of the present invention.
Some of the compounds of formula (I) can exist in more than one tautomeric form. The invention includes methods using all such tautomers.
All terms as used herein in this specification, unless otherwise stated, shall be understood in their ordinary meaning as known in the art.
Alkyl, alkenyl, alkynyl, alkoxy, alkylthio, acyl, alkoxycarbonyl, acyloxy, acylamino, alkylsulfonyl and all other alkyl containing groups shall be understood unless otherwise specified as being Cl-10, branched or unbranched where structurally possible, and optionally partially or fully halogenated. For 'Co-n alkyl', where n is an integer 1,2,3 etc, shall be understood to be a bond when the definition is 'Co', and alkyl when n is greater than or equal to 1. Other more specific definitions are as follows:
BOC or t-BOC is tertiary-butoxycarbonyl. t-Bu is tertiary-butyl.
DMF is dimethylformamide.
EtOAc is ethyl acetate. EtOH and MeOH are ethanol and methanol, respectively.
TFA is trifluoroacetic acid. THF is tetrahydrofuran.
DMSO is dimethylsulfoxide.
TBTU is O-(lH-benzotriazol-l-yl)-N,N.N',N'-tetramethyluronium tetrafluoroborate.
FMOC is 9-fluorenylmethoxycarbonyl.
The term "aroyl" as used in the present specification shall be understood to mean "benzoyl" or "naphthoyl".
The term "carbocycle" shall be understood to mean an aliphatic hydrocarbon radical containing from three to twelve carbon atoms. Carbocycles include hydrocarbon rings containing from three to ten carbon atoms. These carbocycles may be either aromatic and non-aromatic ring systems, and optionally or fully halogenated. The non-aromatic ring systems may be mono- or polyunsaturated. Preferred carbocycles include but are not limited to cyclopropyl, cyclobutyl, cyclopentyl, cyclopentenyl, cyclohexyl, cyclohexenyl, cycloheptanyl, cycloheptenyl, phenyl, indanyl, indenyl, benzocyclobutanyl, dihydronaphthyl, tetrahydronaphthyl, naphthyl, decahydronaphthyl, benzocycloheptanyl and benzocycloheptenyl. Certain terms for cycloalkyl such as cyclobutanyl and cyclobutyl shall be used interchangeably.
The term "heterocycle" refers to a stable nonaromatic 4-8 membered (but preferably, 5 or 6 membered) monocyclic or nonaromatic 8-11 membered bicyclic heterocycle radical which may be either saturated or unsaturated. Each heterocycle consists of carbon atoms and one or more, preferably from 1 to 4 heteroatoms selected from nitrogen, oxygen and sulfur. The heterocycle may be attached by any atom of the cycle, which results in the creation of a stable structure. Unless otherwise stated, heterocycles include but are not limited to, pyrrolidinyl, morpholinyl, thiomorpholinyl, dioxalanyl, piperidinyl, piperazinyl, aziridinyl and tetrahydrofuranyl.
The term "heteroaryl" shall be understood to mean an aromatic 5-8 membered monocyclic or 8-11 membered bicyclic ring containing 1-4 heteroatoms such as N,O and S. Unless otherwise stated, such heteroaryls include but are not limited to thienyl, furanyl, isoxazolyl, oxazolyl, thiazolyl, thiadiazolyl, tetrazolyl, pyrazolyl, pyrrolyl, imidazolyl, pyridinyl, pyrimidinyl, pyrazinyl, pyridazinyl, pyranyl, quinoxalinyl, indolyl, benzimidazolyl, benzoxazolyl, benzothiazolyl, benzothienyl, quinolinyl, quinazolinyl and indazolyl.
The term "heteroatom" as used herein shall be understood to mean atoms other than carbon such as O, N, S and P.
In all alkyl groups or carbon chains within cycloalkyl groups, where one or more carbon atoms are optionally replaced by heteroatoms: O, S or N, it shall be understood that if N is not substituted then it is NH, it shall also be understood that the heteroatoms may replace either terminal carbon atoms or internal carbon atoms within a branched or unbranched carbon chain.
Substitution on a carbon such as a methylene carbon by groups such as oxo result in definitions such as: alkoxycarbonyl, acyl, and amido , or if substituted on a ring can, for example, replace a methylene group -CH2- with a carbonyl >C=O.
The term "aryl" as used herein shall be understood to mean aromatic carbocycle or heteroaryl as defined herein. Each aryl or heteroaryl unless otherwise specified includes its partially or fully hydrogenated derivative. For example, quinolinyl may include decahydroquinolinyl and tetrahydroquinolinyl, naphthyl may include its hydrogenated derivatives such as tetrahydranaphthyl. Each may be partially or fully halogenated. Other partially or fully hydrogenated derivatives of the aryl and heteroaryl compounds described herein will be apparent to one of ordinary skill in the art.
Terms which are analogs of the above cyclic moieties such as aryloxy or heteroaryl amine shall be understood to mean an aryl, heteroaryl, heterocycle as defined above attached to it's respective functional group. As used herein, "nitrogen" and "sulfur" include any oxidized form of nitrogen and sulfur and the quatemized form of any basic nitrogen. For example, for an alkylthio radical such as -S-Cι-6 alkyl, unless otherwise specified, this shall be understood to include -S(O)-C1.6 alkyl and -S(O)2-C1.6 alkyl.
The term "halogen" as used in the present specification shall be understood to mean bromine, chlorine, fluorine or iodine. The definitions "partially or folly halogenated" "substituted by one or more halogen atoms" includes for example, mono, di or tri halo derivatives on one or more carbon atoms. A non-limiting example would be a halogenated alkyl such as -CH2CHF2, -CF3 etc.
The compounds of the invention are only those which are contemplated to be 'chemically stable' as will be appreciated by those skilled in the art. For example, a compound which would have a 'dangling valency', or a 'carbanion' are not compounds contemplated by the inventive methods disclosed herein.
The term "patient" refers to a warm-blooded mammal and preferably, a human.
The invention includes pharmaceutically acceptable derivatives of compounds of formula (I). A "pharmaceutically acceptable derivative" refers to any pharmaceutically acceptable salt or ester, or any other compound which, upon administration to a patient, is capable of providing (directly or indirectly) a compound useful for the invention, or a pharmacologically active metabolite or pharmacologically active residue thereof. A pharmacologically active metabolite shall be understood to mean any compound of the invention capable of being metabolized enzymatically or chemically. This includes, for example, hydroxylated or oxidized derivative compounds of the formula (I).
Pharmaceutically acceptable salts include those derived from pharmaceutically acceptable inorganic and organic acids and bases. Examples of suitable acids include hydrochloric, hydrobromic, sulfuric, nitric, perchloric, fumaric, maleic, phosphoric, glycolic, lactic, salicylic, succinic, toluene-p-sulforic, tartaric, acetic, citric, methanesulfonic, formic, benzoic, malonic, naphthalene-2-sulfuric and benzenesulfonic acids. Other acids, such as oxalic acid, while not themselves pharmaceutically acceptable, may be employed in the preparation of salts useful as intermediates in obtaining the compounds and their pharmaceutically acceptable acid addition salts. Salts derived from appropriate bases include alkali metal (e.g., sodium), alkaline earth metal
(e.g., magnesium), ammonium and N-(C -C alkyl)4+ salts.
In addition, within the scope of the invention is use of prodrugs of compounds of the formula (I). Prodrugs include those compounds that, upon simple chemical transformation, are modified to produce compounds of the invention. Simple chemical transformations include hydrolysis, oxidation and reduction. Specifically, when a prodrug is administered to a patient, the prodrug may be transformed into a compound disclosed herein above, thereby imparting the desired pharmacological effect. METHODS OF THERAPEUTIC USE
The compounds of the invention are effective inhibitors of Tec kinase family activity, especially of Itk. Therefore, in one embodiment of the invention, there is provided methods of treating immunological disorders using compounds of the invention. In another embodiment, there is provided methods of treating inflammatory disorders using compounds of the invention. In yet another embodiment, there is provided methods of treating allergic disorders using compounds of the invention. In yet still another embodiment, there is provided methods of enhancing memory cell generation for vaccines using compounds of the invention. In a further embodiment, there is provided methods of treating cell proliferative disorders using compounds of the invention.
Without wishing to be bound by theory, the compounds of this invention modulate T cell and mast cell activation via effective inhibition of Itk. The inhibition of T cell activation is therapeutically useful for selectively suppressing immune function. Thus, the inliibition of Itk is an attractive means for preventing and treating a variety of immune disorders, including inflammatory diseases, autoimmune diseases, organ and bone marrow transplant rejection and other disorders associated with T cell mediated immune response. In particular, the compounds of the invention may be used to prevent or treat acute or chronic inflammation, allergies, contact dermatitis, psoriasis, rheumatoid arthritis, multiple sclerosis, type 1 diabetes, inflammatory bowel disease, Guillain-Barre syndrome, Crohn's disease, ulcerative colitis, cancer, graft versus host disease (and other forms of organ or bone marrow transplant rejection) and lupus erythematosus.
The compounds of the invention are also effective inhibitors of Tec family kinases other than Itk including Txk, Tec, Btk, and Bmx and would thus be useful in treating diseases associated with the activity of one or more of these Tec family kinases.
Inhibitors of mast cell activation and degranulation block the release of allergic and pro- inflammatory mediators and cytokines. Thus inhibitors of Itk have potential utility in treating inflammatory and allergic disorders, including asthma, chronic obstructive pulmonary disease (COPD), adult respiratory distress syndrome (ARDS), bronchitis, conjunctivitis, dermatitis and allergic rhinitis. Other disorders associated with T cell or mast cell mediated immune response will be evident to those of ordinary skill in the art and can also be treated with the compounds and compositions of this invention.
Inhibitors of Itk and other Tec family kinases have potential utility in combination with other therapies for the treatment of immune, inflammatory, proliferative, and allergic disorders. Examples, though not all encompassing, include co-administration with steroids, leukotriene antagonists, anti-histamines, cyclosporin, or rapamycin.
One strategy to improve vaccination methods is to increase the number of memory T cells generated. As described in the Background, in the absence of Itk in mice, increased numbers of memory cells are generated. Thus, within the scope of the invention is the use of the present compounds in the formulation of improved vaccines that generate increased numbers of memory T cells. For therapeutic use, the compounds of the invention may be administered in any conventional dosage form in any conventional manner. Routes of administration include, but are not limited to, intravenously, intramuscularly, subcutaneously, intrasynovially, by infusion, sublingually, transdermally, orally, topically or by inhalation. The preferred modes of administration are oral and intravenous.
The compounds of this invention may be administered alone or in combination with adjuvants that enhance stability of the inhibitors, facilitate administration of pharmaceutic compositions containing them in certain embodiments, provide increased dissolution or dispersion, increase inhibitory activity, provide adjunct therapy, and the like, including other active ingredients. Advantageously, such combination therapies utilize lower dosages of the conventional therapeutics, thus avoiding possible toxicity and adverse side effects incurred when those agents are used as monotherapies. Compounds of the invention may be physically combined with the conventional therapeutics or other adjuvants into a single pharmaceutical composition. Advantageously, the compounds may then be administered together in a single dosage form. In some embodiments, the pharmaceutical compositions comprising such combinations of compounds contain at least about 5%, but more preferably at least about 20%, of a compound of formula (I) (w/w) or a combination thereof. The optimum percentage (w/w) of a compound of the invention may vary and is within the purview of those skilled in the art. Alternatively, the compounds may be administered separately (either serially or in parallel). Separate dosing allows for greater flexibility in the dosing regime.
As mentioned above, dosage forms of the compounds of this invention include pharmaceutically acceptable carriers and adjuvants known to those of ordinary skill in the art. These carriers and adjuvants include, for example, ion exchangers, alumina, aluminum stearate, lecithin, serum proteins, buffer substances, water, salts or electrolytes and cellulose-based substances. Preferred dosage forms include, tablet, capsule, caplet, liquid, solution, suspension, emulsion, lozenges, syrup, reconstitutable powder, granule, suppository and transdermal patch. Methods for preparing such dosage forms are known (see, for example, H.C. Ansel and N.G. Popovish, Pharmaceutical Dosage Forms and Drug Delivery Systems, 5th ed., Lea and Febiger (1990)). Dosage levels and requirements are well-recognized in the art and may be selected by those of ordinary skill in the art from available methods and techniques suitable for a particular patient. In some embodiments, dosage levels range from about 1-1000 mg/dose for a 70 kg patient. Although one dose per day may be sufficient, up to 5 doses per day may be given. For oral doses, up to 2000 mg/day may be required. As the skilled artisan will appreciate, lower or higher doses may be required depending on particular factors. For instance, specific dosage and treatment regimens will depend on factors such as the patient's general health profile, the severity and course of the patient's disorder or disposition thereto, and the judgment of the treating physician.
BIOLOGICAL ACTIVITY
Tec Family Kinase Assay Itk, Txk, Tec, Btk, and Bmx are purified as a GST-fosion protein. The kinase activity is measured using DELFIA (Dissociation Enhanced Lanthanide Fluoroimmunoassay) which utilizes europium chelate-labeled anti-phosphotyrosine antibodies to detect phosphate transfer to a random polymer, poly Glv^: Tyri (PGTYR). The screen is run on the Zymark Allegro robot system to dispense reagents, buffers and samples for assay, and also to wash and read plates. The kinase assay is performed in kinase assay buffer (50 mM HEPES, pH 7.0, 25 mM MgCl2, 5 mM MnCl2, 50 mM KC1, 100 μM Na3VO , 0.2% BSA, 0.01% CHAPS, 200 μM TCEP). Test samples initially dissolved in DMSO at 1 mg/mL, are pre-diluted for dose response (10 doses with starting final concentration of 3 μg/mL, 1 to 3 serial dilutions) with the assay buffer in 96-well polypropylene microtiter plates. A 50 μL volume/well of a mixture of substrates containing ATP (final ATP concentration in each kinase assay is equal to its apparent ATP Km) and 3.6 ng/μL PGTYR-biotin (CIS Bio International) in kinase buffer is added to neutravidin coated 96- well white plate (PIERCE), followed by 25 μL/well test sample solution and 25 μL/well of diluted enzyme (1-7 nM final cone). Background wells are incubated with buffer, rather than 25 μL enzyme. The assay plates are incubated for 30 min at room temperature. Following incubation, the assay plates are washed three times with 250 μL DELFIA wash buffer. A 100 μL aliquot of 1 nM europium-labeled anti-phosphotyrosine (Eu3+-PT66, Wallac CR04-100) diluted in DELFIA assay buffer is added to each well and incubated for 30 min at room temperature. Upon completion of the incubation, the plate is washed four times with 250 μL of wash buffer and 100 μL of DELFIA Enhancement Solution (Wallac) is added to each well. After 15 min of longer, time- resolved fluorescence is measured (excitation at 360 nm, emission at 620 nm) after a delay time of 250 μs.
Preferred compounds of the invention have an activity of 1 microMolar or less.
In order that this invention be more fully understood, the following examples are set forth. These examples are for the purpose of illustrating preferred embodiments of this invention, and are not to be construed as limiting the scope of the invention in any way.
The examples which follow are illustrative and, as recognized by one skilled in the art, particular reagents or conditions could be modified as needed for individual compounds without undue experimentation. Starting materials used in the schemes below are either commercially available or easily prepared from commercially available materials by those skilled in the art.
GENERAL SYNTHETIC METHODS
The invention also provides processes for making compounds of formula I. In all schemes, unless specified otherwise, R or Ar substituents in the formulas below shall have the meaning of R or Ar substituents in the formula I of the invention described herein above. Intermediates used in the preparation of compounds of the invention are either commercially available or readily prepared by methods known to those skilled in the art. Further reference in this regard may be made to WO 03/041708 corresponding to US publication US 2003-0144281, and PCT application PCT/US03/24024 corresponding to US application no. 10/632,888, and US provisional no.60/536,362. Compounds of formula I in which T is in the 5-position and is -N(R7)C(O)R5, Xa is O and Rt is H may be prepared by the method outlined in Scheme I.
Scheme I
Figure imgf000120_0001
II (Y = halogen) III
Figure imgf000120_0002
As illustrated in Scheme I, a 4-halo-3-nitroaniline II, preferably 4-fluoro-3-nitroaniline, is reacted with R5C(O)Cl in the presence of a suitable base such as pyridine to form amide III. This intermediate is then reacted with R3NH2 in the presence of a base such as triethylamine to form IV. Reduction of the nitro group by methods known in the art, for example by treatment with hydrogen or a hydrogen source such as ammonium carbonate in the presence of a catalyst such as palladium on carbon provides V. Reaction of V with cyanogen bromide in a suitable solvent such as ethanol provides benzimidazole VI. Alternatively, reaction of V with thiopseudourea in the presence of catalytic amount of acid such as p-toluene sulfonic acid (pTSA), followed by a deprotection of the carbamate group provides benzimidazole VI. Reaction of VI with Ar2-ArιC(O)Cl in the presence of a base such as pyridine provides the desired compound of formula (I). Alternatively, reaction of VI with Ar -Ar1COOH in the presence of a suitable coupling reagent such as l-(3-dimethylaminopropyl)-3-ethylcarbodiimide (EDC) and a base such as diisopropylethylamme provides the desired compound formula (I).
If one desires a compound of formula (I) in which R7 is alkyl, one may react intermediate III with an alkyl halide in the presence of a suitable base such as sodium bistrimethylsilylamide to produce VII as illustrated in Scheme II. One may then proceed with the displacement of the ring halogen with R3NH2 and subsequent steps as described in Scheme I to produce the desired compound of formula (I).
Scheme II
Figure imgf000121_0001
III (Y = halogen) VII
Figure imgf000121_0002
1 (R7 = alkyl)
Compounds of formula (I) in which R is in the 6-position and is -N(R )C(O)R5j Xa is O and Ri is H may be prepared as described in Scheme III. A 4-nitro-3-halotoluene (VIII), preferably 4-nitro-3-fluorotoluene is treated with a suitable oxidizing agent such as sodium dichromate to provide benzoic acid derivative IX. This is converted to an aniline derivative by methods known in the art, for example by refluxing with diphenylphosphorylazide in a mixture of tert-butyl alcohol and dioxane to provide the tert-butoxycarbonyl-protected aniline X. Deprotection of the aniline, in this case by treatment with acid such as trifluoroacetic acid provides XL This may then be reacted further as described in Schemes I and II to provide the desired compounds of formula (I) having t in the 6-position.
Scheme III
Figure imgf000122_0001
XI l (R7 = H or alkyl)
Compounds of formula (I) in which i is -CH2N(R7)C(O)R5 and is in the 5-position, Xa is O and Ri is H may be prepared as described in Scheme IV. As illustrated below, a 4- halo-3-nitrobenzoic acid (XII), preferably a 4-fluoro-3-nitrobenzoic acid is coupled with R7NH2 using a suitable coupling reagent such as l-(3-dimethylaminopropyl)-3- ethylcarbodiimide (EDC) to form XIII. Reaction of XIII with R3NH2 in the presence of a suitable base such as triethylamine provides XIV. Reduction of the amide functionality with a suitable reducing agent such as borane-tetrahydrofuran complex gives the benzylamine XV. Reaction of XV with R5C(O)Cl, in the presence of a base such as diisopropylethylamme provides XVI. This may then be reduced as described for intermediate IV in Scheme I, and further reacted as described in Scheme I to provide the desired compounds of formula (I) with Rj being -CH2N(R7)C(O)R5 and in the 5- position.
Scheme IV
Figure imgf000123_0001
XIV XV
Figure imgf000123_0002
XVI
Compounds of formula (I) in which t is -CH N(R7)C(O)R5 and is in the 6-position, Xa is O and Ri is H may be prepared starting with intermediate IX in Scheme III. Treatment of IX in the manner described in Scheme IV for intermediate XII will provide the desired compounds.
Compounds of formula (I) in which t is in the 5-position and is -CH N(R5)(R ) may be prepared by the method outlined in Scheme V.
Scheme V
Protection
Figure imgf000124_0002
Figure imgf000124_0001
XVII (Y = halogen) XVIII XIX
Figure imgf000124_0003
Deprotection >-
Figure imgf000124_0004
R7R5NH N Ar Ar2 Reductive amination
As illustrated in Scheme V, a 4-halo-3 -nitro benzyl alcohol (XVII), preferably a 4-fluoro- 3 -nitro benzyl alcohol is protected with a suitable protecting group such as a triisopropylsilyl group, to provide XVIII, where P is a protecting group. Reaction of XVIII with R3NH2 in the presence of a suitable base such as triethylamine provides XIX. Reduction of the nitro group, for example by treatment with a hydrogen source such as ammonium formate in the presence of a catalyst such as palladium on carbon provides XX. Reaction of XX with cyanogen bromide in a suitable solvent such as ethanol provides benzimidazole intermediate XXI. Reaction of XXI with Ar2-ArιC(O)Cl in the presence of a base such as diisopropylethylamine produces amide XXII. Deprotection of the benzyl alcohol, for example by treatment with dilute acid if P is a triisopropylsilyl group, gives XXIII. The benzyl alcohol is then treated with a suitable oxidizing reagent such as MnO to provide the aldehyde XXIV. Reaction of XXIV with R R5NH under reductive amination conditions provides the desired compound of formula (I) in which I^t is -CH N(R5)(R ) and is in the 5-position.
Synthetic Examples Examples 1-7 illustrate syntheses of 5-aryl-2 carboxylic acid intermediates, useful in the preparation of compounds of formula (T):
Example 1: Preparation of 5-quinoIin-8-yl-thiophene-2-carboxylic acid
Figure imgf000125_0001
A mixture of 200 mg (0.97mmol) of 5-bromo-2-thiophenecarboxylic acid, 200mg (l.lδmmol, 1.2 eq.) of 8-quinoline boronic acid and 34mg (0.05mmol, 5 mol%) of bistriphenylphosphinepalladium(II) chloride in 1.5mL of 2M Na2CO solution and 3 mL of DMF was heated at 100°C for 10 min under microwave conditions. The resulting mixture was diluted with IN HCI, and the precipitate was collected. This solid was dissolved in MeOH and acetone, and this solution was treated with (MgSO4) and activated charcoal. The solution was filtered through diatomaceous earth and concentrated. The residual solid was triturated with EtOAc and hexanes to give 220mg (89%) of desired compound as a light orange solid.
Example 2: Preparation of 5-oxazol-2-yl-thiophene-2-carboxylic acid
Figure imgf000125_0002
To a stirred suspension of thiophene-2,5-dicarboxylic acid monomethyl ester (0.7g) in dichloromethane (40mL) was added oxalyl chloride (3.8mL, 2eq.) at room temperature followed by DMF (one drop) under nitrogen. After 2.5h the reaction was concentrated and the residue was diluted with dichloromethane. Amino acetaldehyde dimethylacetal (lg, 2.7eq.) was added and the reaction was stirred over night. The reaction was poured into IM HCI (150mL) and the layers were separated. The organic phase was dried (MgSO4), filtered and concentrated to give 5-(2,2-dimethoxy-ethylcarbamoyl)-thiophene- 2-carboxylic acid methyl ester as a solid (0.8g) which was used without further purification.
The above ester (0.7g) was dissolved in dichloromethane (40mL) and treated with trifluoroacetic acid (TFA) (1.5mL). The reaction was monitored by TLC. Upon complete consumption of the starting material the reaction was concentrated to dryness. The remaining residue was dissolved into dichloromethane and treated again with dichloromethane. The solution was concentrated to dryness and the residue purified via CombiFlash (lOg SiO2, 20%EtOAc/dichloromethane, 20mL/min, UV detection at 254nm). The isolated product was identified as the amide-aldehyde (cleavage of acetal). The aldehyde (0.2g) was dissolved in THF (20mL) and treated with Burgess Reagent (enough to drive reaction to completion, >2eq.; the Burgess reagent should be either recrystallized/purified/or freshly prepared) and warmed to 70°C. Upon complete consumption of the starting material, the reaction mixture was treated with silica gel and concentrated. The remaining solid was purified via CombiFlash (lOg SiO2, dichloromethane, 20mL/min, UV detection at 254nm). The product-containing fractions were combined and concentrated to give 20mg of the desired product (by LC-MS, not recorded) which was used without further purification.
The above ester was hydrolyzed using lithium hydroxide monohydrate in THF and water at 5°C. The reaction was allowed to warm to ambient temperature. After 3h, the reaction appeared complete by LC/MS (not recorded). The reaction was diluted with EtOAc and the layers were separated. The aqueous phase was washed with EtOAc (2x) and acidified using IM HCI. The product was extracted into EtOAc (3x). The combined organics were concentrated to give the title compound which was used without further purification.
Example 3: 5-(2-fluoro-pyridin-4-yl)-thiophene-2-carboxylic acid
Figure imgf000127_0001
A degassed solution of sodium carbonate (3.0 mL; 2.0M in H2O) was added to a stirred solution of 5-di(hydroxyboryl)-2-thiophene carboxylic acid (300 mg), 4-bromo-2- fluoropyridine (307 mg), dichlorobis(triphenylphosphine) palladium (II) (60 mg) in degassed DMF (7.5 mL). The reaction mixture was heated at 100 °C for 6h. The reaction mixture was allowed to cool to room temperature, acidified with IM HCI, and filtered. The solid was dissolved in a 1:1 mixture of MeOH: acetone, decolorizing charcoal was added, and the solution was filtered through a diatomaceous earth pad. The solution was dried with sodium sulfate and the sample concentrated under educed pressure to give 310mg (80%) of title compound.
Example 4: Preparation of 5-oxazol-5-yl-thiophene-2-carboxylic acid
Figure imgf000127_0002
A mixture of 4.5 g (29 mmol) of 5-formyl-2-thiophene carboxylic acid and 12.6 g (102 mmol, 3.5 eqiv.) of Na2CO3 in 50 mL of DMF was treated with 2.2 mL of iodomethane (35 mmol, 1.2 eqiv.) at room temperature for 20 h. The mixture was quenched with H2O with some addition of sat.NH4Cl sol. 5-Formyl-thiophene-2-carboxylic acid methyl ester formed as a precipitate and was collected by filtration (quantitative yield), used directly for next step.
A mixture of 170 mg (1 mmol) of 5-formyl-thiophene-2-carboxylic acid methyl ester, 197 mg (Immol) of tosylmethyl isocyanide and 138 mg (Immol) of K2CO3 in MeOH was refluxed for 0.5 hr. The solvent was evaporated under reduced pressure. The resulting residue was poured into ice-water, and extracted with EtOAc. The extract was washed with saturated aquaous NH4C1, water, brine and dried over MgSO4. The organic solvent was evaporated under reduced pressure and the residue was purified by combiflash to yield 170 mg of 5-oxazol-5-yl-thiophene-2-carboxylic acid methyl ester. Yield 81%.
The above ester (170 mg) was dissolved in 9 mL of THF, 3 mL of MeOH and 3 mL of IN LiOH solution and stirred overnight. The organic solvent was removed. Acetic acid was added to pH ~ 4-5 and a light yellow precipitate formed. The suspension was diluted with water and the precipitate collected by filtration to yield 105 mg of the title compound. Yield 66%.
Example 5; Preparation of 5-oxazoI-4-yl-thiophene-2-carboxylic acid
Figure imgf000128_0001
A mixture of 1.7 g (lOmmol) of 5-acetyl-thiophene-2-carboxylic acid, 0.75 mL Mel (12 mmol), 4.3 g of Na2CO3 (35mmol) in DMF 10 mL was allowed to stir at room temperature overnight. Quench with water with some addition of sat. NH C1 sol. Precipitate formed and was collected to yield 1.48g of 5-acetyl-thiophene-2-carboxylic acid methyl ester as a white solid. Yield 80%.
A mixture of 5.1 g of 5-acetyl-thiophene-2-carboxylic acid methyl ester, 11 g of CuBr2 in 50 mL of EtOAc was refluxed for 6 hrs. The reaction mixture was cooled to rt and filtered through diatomaceous earth and purified by combiflash to yield 5 g of 5-(2- bromo-acetyl)-thiophene-2-carboxylic acid methyl ester.. Yield 69%.
A mixture of 263 mg (Immol) of the above ester and 0.4 mL of formamide was heated to 120°C. Then a mixture of 0.2 mL and 0.1 g of concentrated H2SO4 was added. The reaction mixture was heated at 120°C for 1 h. The reaciton mixture was cooled down to room temperature and poured into water, and extracted with ether. The ethereal extract was dried over MgSO4, and concentrated in vacuo. The residue was purified by combiflash to yield 60 mg of 5-oxazol-4-yl-thiophene-2-carboxylic acid methyl ester as light yellow solid. Yield 30%.
The above ester was dissolved in 3 mL THF, 1 mL MeOH and 1 mL IN LiOH solution and stirred overnight. The solvent was removed. Acetic acid was added and a light yellow precipitate formed which was collected by filtration to yield 20 mg of the title compound. Yield 33%.
Example 6: Preparation of 5-pyridin-4-yl-thiophene-2-carboxylic acid
Figure imgf000129_0001
5-Bromo-thiophene-2-carboxylic acid (10 g, 48 mmol) was taken up in CH3OH and HCI was bubbled through the solution for 10 min at room temperature. The reaction was then stirred for 16 h at room temperature. The CH3OH/HCl was removed under reduced pressure and the residue was taken up in EtOAc and the organic layer was washed with NaHCO3. The organic layer was washed with water, with brine then dried over anhydrous MgSO . The solution was removed under reduced pressure providing 8.7 g of 5-bromo-thiophene-2-carboxylic acid methyl ester as a white solid, pure enough to use in next step. Yield 87%.
Pd(PPh3)4 (132 mg, 10%) was added to a degassed solution of 5-bromo-thiophene-2- carboxylic acid methyl ester (220 mg, 1 mmol) and pyridine-4-ylboronic acid (246 mg, 2 mmol) in 3 mL of DMF. Sodium carbonate (530mg, 5 mmol) and a few drops of water were added. The reaction vessel was microwave heated at 140°C for 20 min. The Pd catalyst was separated from the reaction mixture by filtration. The mixture was diluted with EtOAc and water. The combined organic extracts were washed with a NaHCO3 saturated solution, brine, dried with MgSO4, filtered and concentrated. The residue was purified to yield 130 mg of 5-pyridin-4-yl-thiophene-2-carboxylic acid methyl ester. Yield 30%.
5-Pyridin-4-yl-thiophene-2-carboxylic acid methyl ester was dissolved in 6 mL THF, 2 mL MeOH and added IN LiOH and stirred overnight. The solvent was removed. IN HCI was added and a yellow precipitate formed. LC/MS showed only product. The suspension was diluted with water and the precipitate collected by filtration to yield 130 mg of the title compound as a light yellow solid. Yield 68%.
Example 7; Preparation of 5-(2-tert-butoxycarbonylamino-thiazol-4-yl)-thiophene-2- carboxylic acid
Figure imgf000130_0001
A mixture of 332 mg (1.3 mmol) of 5-(2-bromo-acetyl)-thiophene-2-carboxylic acid methyl ester, 110 mg (1.3 mmol) of N-Boc thiourea, 103 mg (1.3mmol) of NaOAc in 10 mL EtOH was refluxed for 4 hr. The crude mixture was purified by combiflash to yield 200 mg of 5-(2-tert-butoxycarbonylamino-thiazol-4-yl)-thiophene-2-carboxylic acid methyl ester. Yield 26%.
The above ester was dissolved in 9 mL of THF, 3 mL of MeOH and 3 mL of IN LiOH solution and stirred overnight. The organic solvent was removed. Acetic acid was added and white precipitate formed. The precipitate was collected by filtration to yield 150 mg of the title compound. Yield 79%.
Example 8: Preparation of l,3-dibenzyIoxycarbonylamino-2-methyl-isothiourea
Figure imgf000131_0001
To a suspension of 2-methyl-isothiourea (l.Og, 3.6mmol) in methylene chloride (50mL) was added IN NaOH (18.0mL, lS.Ommol) and benzyl chloroformate (1.5mL, 10.8 mmol). The mixture was stirred at room temperature for 24h. The mixture was diluted with methylene chloride (20mL) and the organic layer was washed with water three times. The combined organic layers were dried over sodium sulfate, filtered, and evaporated under reduced pressure. The crude oil was absorbed onto silica gel and chromatographed (silica gel, 5:1 hexanes/ethylacetate) provide 1,3- dibenzyloxycarbonylamino-2-methyl-isothiourea (0.78g, 80%) as an oil.
Example 9 and 10 illustrate the synthesis of 2-aminobenzimidazole derivatives useful in the preparation of compounds of formula (T).
Example 9: Preparation of N-[2-amino-l-(2-carbamoyl-ethyl)-lH-benzoimidazol-5- yll -N-methyl-benzamide
Figure imgf000132_0001
A mixture of 20g (0.13mol) of 4-fluoro-3-nitroaniline, 22.3mL (0.19mol, 1.5eq.) of benzoyl chloride and 54g (0.39mol, 3.OOeq.) of K2CO3 in 300mL of EtOAc and 300mL of water was stirred at room temperature for 16h. The precipitate was collected and washed with hexanes to give a desired compound as a light yellow solid. The organic layer of the filtrate was separated. This organic layer was washed with 10% NaOH solution, water and brine, dried (MgSO4), filtered and concentrated. The residual solid was collected and washed with hexanes/EtOAc (4:1). This solid was combined with the other solid to give 32g (96%) of N-(4-fluoro-3-nitro-phenyl)-benzamide as a light yellow solid. The product was pumped for 2h and used for the next reaction without further purification.
A solution of 32g (0.12 mol) of N-(4-fluoro-3-nitro-phenyl)-benzamide in 350 mL of THF was treated with 7.4g (0.185mol, 1.5eq.) of ΝaH (60%) at 0°C and the resulting mixture was stirred at room temperature for 30 min. To this mixture was added 11.5mL (0.185mol, 1.5eq.) of methyliodide at this temperature. The resulting mixture was stirred at room temperature for 2h, and quenched with water. The product was extracted into EtOAc. The organic layer was washed with water and brine, dried (MgSO4) filtered and concentrated. The residue was purified by a short plug of silica gel and the residue was crystalized from EtOAc and hexanes to give 26.6g (79%) of N-(4-fluoro-3-nitro-phenyl)- N-methyl-benzamide as a yellow solid. A solution 24.7g (90.0mmol) of N-(4-fluoro-3-nitro-phenyl)-N-methyl-benzamide in 300mL of DMF was added 22.4g (180mmol, 2.0eq.) of β-alanine amide and 47mL (270mmol, 3.oeq.) of Hunig's base. The resulting solution was stirred at 80°C for lh after which time it was cooled to room temperature and poured into water and EtOAc. The layers were separated and the aqueous phase was extracted with EtOAc (2X). The combined organics were washed with water (2X) and dried (MgSO4). Filtration and concentration gave the desired product which was filtered and washed with EtOAc to give 23.3 g (75%) of N-[4-(2-carbamoyl-ethylamino)-3-nitro-phenyl]-N-methyl- benzamide as an orange solid.
A solution of 23.2g (67.7mmol) of N-[4-(2-carbamoyl-ethylamino)-3-nitro-phenyl]-N- methyl-benzamide and 2.5 g of 10% Pd/C in 350mL of MeOH was stirred at room temperature under hydrogen atmosphere for 3h. Then the reaction mixture was filtered through diatomaceous earth and the filtrate was concentrated. The yellow foamy residue was pumped for 2h providing N-[3-amino-4-(2-carbamoyl-ethylamino)-phenyl]-N- methyl-benzamide which was used for the next reaction without further purification (21.1g, 99%).
To a stirred solution of 9.0g of N-[3-amino-4-(2-carbamoyl-ethylamino)-phenyl]-N- methyl-benzamide in ethanol was added 3.4g (32mmol, 1.1 eq.) of cyanogen bromide. After 2h the reaction was concentrated and dried on house vac for 24h. The remaining residue was washed with EtOAc (3x) and treated with ΝaHCO3 (sat., 500mL) and water (200mL). The precipitated solid was collected via filtration and washed with water. The resulting solid was dried at 60°C for 12h to give 9.2g (95%) of title compound as a crystalline solid.
Example 10: Preparation of N-{2-amino-1 (RV2-(fe -butyl-dimethyl-silanyloxy)-2- phenyl-ethyll-lH-benzoimidazol-5-yll-N-methyl-benzamide
Figure imgf000134_0001
To a solution of [N-(4-fluoro-3-nitro-phenyl)-benzamide] (1.5 g, 5.5 mmol) in DMF (50 mL) were added R-(-)-2-amino-l-phenylethanol (1.3 g, 6.6 mmol) and z'Pr2ΝEt (1.9 mL, 10.9 mmol) at room temperature. The solution was heated to 85 °C for 24 hours. Saturated NH C1 (10 mL) was added and the solution was extracted with EtOAc. The combined organic layer was dried with MgSO4 and was filtered. The filtrate was concentrated and the residue was subjected to LC-MS analysis to confirm the presence of the desired product (2 g, 93.4%). The N- [4-((R -2-hvdroxy-2-phenyl-ethylaminoV3 - nitro-phenyll -N-methyl-benzamide was carried on to the next step without further purification.
To a solution of N-[4-((R)-2-hydroxy-2-phenyl-ethylamino)-3-nitro-phenyl]-N-methyl- benzamide (2.1 g, 5.4 mmol) in CH2C12 (50 mL) were added TBSC1 (0.97 g, 6.4 mmol) and imidazole (0.74 g, 10.7 mmol) at room temperature. The solution was stirred at the same temperature for 24 h. 0.5 M HCI (20 mL) was added and the solution was stirred for 5 min. The solution was extracted with EtOAc and the combined organic layer was dried with MgSO4 and was filtered. The filtrate was concentrated under reduced pressure and the residue was purified by Combiflash with 10% EtOAc in hexane to afford N-{4-[(R)- 2-(tert-butyl-dimethyl-silanyloxy)-2-phenyl-ethylamino]-3-nitro-phenyl}-N-methyl- benzamide (2.7 g, 99.5 %) as orange foam. To a solution of N-{4-[(R)-2-(tert-butyl-dimethyl-silanyloxy)-2-phenyl-ethylamino]-3- nitro-phenyl}-N-methyl-benzamide (1.5 g, 2.9 mmol) in abs EtOH (50 mL) was added Pd/C (500 mg). The solution was degassed and H2 was introduced. The solution was stirred at room temperature under the H2 atmosphere for 24 hours. The solution was filtered through diatomaceous earth and was concentrated. The residue was subjected to LC-MS analysis to confirm the presence of the desirable product (1.4 g, 99.2 %). The N- {3-amino-4-[(R)-2-(tert-butyl-dimethyl-silanyloxy)-2-phenyl-ethylamino]-phenyl}-N- methyl-benzamide was carried on to the next step of the synthesis without further purification.
To a solution of N-{3-amino-4-[(R)-2-(tert-butyl-dimethyl-silanyloxy)-2-phenyl- ethylamino]-phenyl}-N-methyl-benzatnide (1.5 g, 3.1 mmol) in absolute EtOH (50 mL) was added BrCΝ (0.5 g, 4.7 mmol) at room temperature. The solution was stirred at the same temperature for 24 h. The completion of the reaction was confirmed by LC-MS. The solution was concentrated providing the title compound (1.5 g, 95 %) which was used without further purification.
Examples 11-14 illustrate syntheses of compounds of formula (I) using intermediates from the above examples or prepared as described in the above examples.
Example 11: Preparation of 5-oxazol-5-yl-thiophene-2-carboxylic acid [5-(benzoyl- methyl-amino)-l-((R)-2-hydroxy-2-phenyl-ethyl)-lH-benzoimidazol-2-yl] -amide
Figure imgf000136_0001
To a solution of N-{2-amino-l-[(R)-2-(tert-butyl-dimethyl-silanyloxy)-2-phenyl-ethyl]- lH-benzoimidazol-5-yl}-N-methyl-benzamide (Example 10) (100 mg, 0.2 mmol) in dry DMF (15 mL) were added 5-oxazol-5-yl-thiophene-2-carboxylic acid (Example 4) (78 mg, 0.4 mmol), EDC (115 mg, 0.6 mmol), ΗOBt (1-hydroxybenzotriazole hydrate; 54 mg, 0.4 mmol) and i-Pr2ΝEt (0.07 mL, 0.4 mmol). The solution was stirred at room temperature for 24 h. Saturated NaΗCO3 solution (10 mL) was added and the solution was extracted with EtOAc (3 portions of 20 mL each). The combined organic layers were dried with MgSO and were filtered. The filtrate was concentrated under reduced pressure. The residue was subjected to silica gel chromatography with 1 to 1 hexane and EtOAc as the eluent to afford 5-oxazol-5-yl-thiophene-2-carboxylic acid {5-(benzoyl- methyl-amino)- 1 -[(R)-2-(tert-butyl-dimethyl-silanyloxy)-2-phenyl-ethyl] - 1 H- benzoimidazol-2-yl} -amide (92 mg, 68 %) as a colorless oil.
To a solution of the above amide (30 mg, 0.04 mmol) in THF (5 mL) was added TBAF (0.09 mL, 0.08 mmol) at room temperature. The solution was stirred at the same temperature for 24 h. Saturated NH4C1 (10 mL) was added and the solution was extracted with EtOAc. The combined organic layer was dried with MgSO4 and was filtered. The filtrate was concentrated under reduced pressure and the residue was purified by CombiFlash with 3% MeOH in CH2C12 as the eluent to afford the title compound (15.3 mg, 62%) as a yellow foam. MS (ESMS) m/z=564 (M+H)+ Example 12: Preparation of 5-(2-amino-thiazoI-4-ylVthiophene-2-carboxylic acid [5-(benzoyl-methyl-aminoVl-(2-carbamovI-ethyl)-lH-benzoimidazoI-2-vn-amide
Figure imgf000137_0001
A mixture of 155mg (0.37mmol) of N-[2-amino-l-(2-carbamoyl-ethyl)-lH- benzoimidazol-5-yl]-N-methyl-benzamide (Example 9) and 145mg (0.44mmol, 1.2eq.) of 5-(2-tert-butoxycarbonylamino-thiazol-4-yl)-thiophene-2-carboxylic acid (Example 7) in 3mL DMF was treated with 84mg (0.44mmol, 1.2eq.) of EDC, 60mg (0.44mmol,1.2eq.) of ΗOBt and 144uL (0.66mol, 2.4eq.) of z-Pr2ΝEt and stir at room temperature overnight. The reaction mixture was diluted with water, precipitate formed which was collected by filtration and purified by combiflash to yield 120 mg (4-{5-[5-(benzoyl- methyl-amino)- 1 -(2-carbamoyl-ethyl)- lH-benzoimidazol-2-ylcarbamoyl] -thiophen-2- yl}-thiazol-2-yl)-carbamic acid tert-butyl ester. Yield 50%.
A mixture of 80 mg of the above ester in 5 mL of CΗ2C12 was treated with 0.1 mL of TFA at room temperature. The reaction mixture was allowed to stir at the same temperature for 2 h. TLC showed no reaction. After stirring overnight, TLC still showed starting material remained. More TFA was added (total 1 mL) until TLC showed starting material was gone. The reaction was quenched with NaHCO3 solution and extracted into EtOAc. Organics were combined, washed with water, saturated aqueous NaHCO3, water, saturated aqueous NaCl, dried (MgSO ), filtered and the solvent evaporated. The residue was purified by combiflash to yield 26 mg of the title compoxind as light yellow foam. Yield 37%. MS (ESMS) m/z=546 (M+H)+
Example 13: Preparation of 5-oxazol-5-yl-thiophene-2-carboxylic acid [5-(benzoyl- methyl-amino)-l-(2-pyridin-3-yl-ethyl)-lH-benzoimidazol-2-yl]-amide
Figure imgf000138_0001
To a solution of N-[3-amino-4-(2-pyridin-3-yl-ethylamino)-phenyl]-N-methyl-benzamide (2.25 g, 6.50 mmol) in methanol (7 mL) was added l,3-dibenzyloxycarbonylamino-2- methyl-isothiourea (Example 8) (2.10 g, 7.79 mmol) and/7-toluenesulfonic acid (0.124 g, 0.65 mmol). The flask was fitted with a water condenser and the reaction was heated for 24 h at 50°C. The reaction mixture was then cooled to room temperature and the solvents removed at reduced pressure. Flash chromatography (silica gel, 75:25 to 33:67 hexanes EtO Ac) afforded [5 -(benzoyl-methyl-amino)- 1 -(2-pyridin-3 -yl-ethyl)- 1 H- benzoimidazol-2-yl]-carbamic acid benzyl ester (1.25 g, 38%) as a solid.
To a solution of the above benzyl ester (1.50 g, 2.97 mmol) in ethanol (100 mL) was added 10% w/w palladium on carbon (wet, 450 mg). The reaction was hydrogenated at 45 psi for 4 h then filtered through diatomaceous earth. The filtrate was concentrated at reduced pressure, and the solids were triturated with dichloromethane to afford N-[2- amino-l-(2-pyridin-3-yl-ethyl)-lH-benzoimidazol-5-yl]-N-methyl-benzamide (1.0 g, 91%) as a white solid.
To a solution of the above benzamide (92.4 mg, 0.249 mmol) and 5-oxazol-5-yl- thiophene-2-carboxylic acid (Example 4) (58.3 mg, 0.299 mmol) in DMF (3 mL) was added ΗOBt (48.0 mg, 0.348 mmol), EDC (68.0 mg, 0.348 mmol), and N,N- diisopropylethylamine (0.120 mL, 0.682 mmol). After stirring at room temperature overnight, the reaction mixture was diluted with EtOAc and washed with aqueous sodium bicarbonate and brine. The combined aqueous layer was then back extracted with EtOAc. The combined organic layer was washed with brine, dried over sodium sulfate, filtered and concentrated at reduced pressure. The residue was chromatographed (silica flash column, 95:5 dichloromethane/methanol) to afford the title compound (60 mg, 44%). MS (ESMS) m/z=549 (M+Η)+
Example 14: Preparation of 5-Oxazol-5-yl-thiophene-2-carboxylic acid [5-[(3- cyano-benzoyl)-methyl-amino1-l-(2-pyridin-3-yI-ethyl)-lH-benzoimidazol-2-yIl- amide
Figure imgf000139_0001
To a solution of N-[3-amino-4-(2-pyridin-3-yl-ethylamino)-phenyl]-2,2,2-trifluoro-N- methyl-acetamide (4.30 g, 12.7 mmol) in methanol (35 mL) was added 1,3- dimethoxycarbonylamino-2-methyl-isothiourea (2.62 g, 12.7 mmol) andp- toluenesulfonic acid (0.24 g, 1.27 mmol). The mixture was heated for 24 h at reflux and then cooled to room temperature and concentrated to dryness at reduced pressure. Flash chromatography (silica gel, 75:25 to 33:67 hexanes/EtOAc) afforded [5-[methyl-(2,2,2- trifluoro-acetyl)-amino] - 1 -(2-pyridin-3 -yl-ethyl)- 1 H-benzoimidazol-2-yl] -carbamic acid methyl ester (4.54 g, 85%) as a solid.
A sealed tube containing a solution of the above methyl ester (0.75 g, 1.78 mmol), 35% aq. KOΗ (10 mL) and hydrazine monohydrate (0.86 mL, 17.8 mmol) in methanol (10 mL) was heated at 130 °C for 24 h. The methanol was removed at reduced pressure, and the residue was diluted with dichloromethane and washed with water (2 x 25 mL) and brine (2 x 25 mL). The aqueous layer was extracted with 75:25 chloroform/2-propanol, and the organic layers were combined, dried over sodium sulfate and concentrated to a dark oil. Flash chromatography (silica gel, 95:5 to 85:15 dichloromethane/methanol) afforded N -Methyl-l-(2-pyridin-3-yl-ethyl)-lH-benzoimidazole-2,5-diamine (0.4 g,
83%o) as a solid.
To a solution of N -Methyl-l-(2-pyridin-3-yl-ethyl)-lH-benzoimidazole-2,5-diamine
(1.22 g, 4.56 mmol) and 3-cyanobenzoic acid (740 mg, 5.03 mmol) in DMF (30 mL) was added ΗOBt (693 mg, 5.03 mmol), EDC (984 mg, 5.03 mmol), and N,N- diisopropylethylamine (1.20 mL, 6.82 mmol). The solution was stirred for 13 h at room temperature. The mixture was diluted with EtOAc and washed with aqueous sodium bicarbonate and brine. The combined aqueous layer was then back extracted with EtOAc. The combined organic layer was washed with brine, dried over sodium sulfate, filtered and concentrated at reduced pressure. The residue was chromatographed (silica flash column, 95:5 to 88:12 dichloromethane/methanol) to afford N-[2-Amino-l-(2-pyridin-3- yl-ethyl)-lH-benzoimidazol-5-yl]-3-cyano-N-methyl-benzamide (1.31 mg, 72%) as a brown foam. To a solution of N-[2-amino-l-(2-pyridin-3-yl-ethyl)-lH-benzoimidazol-5-yl]-3-cyano- N-methyl-benzamide (205 mg, 0.517 mmol) and 5-oxazol-5-yl-thiophene-2-carboxylic acid (Example 4) (125 mg, 0.64 mmol) in DMF (5 mL) was added EDC (141 mg, 0.735 mmol), ΗOBt (101 mg, 0.747 mmol) and N,N-diisoproρylethylamine (242 μL, 178 mg, 1.39 mmol). The solution was stirred for 14 h at room temperature. Water (3 mL) and saturated sodium bicarbonate (3 mL) were added, and the mixture was stirred for 10 min. The product, which separated as an oil, was extracted with EtOAc (4 x 20 mL). The organic extracts were combined, washed with brine, dried over sodium sulfate, filtered and concentrated at reduced pressure. The residue was cliromatographed (silica flash column, 99:1 to 97:3 dichloromethane/methanol) to afford the title compound (230 mg, 78%) as a yellow foam. MS (ESMS) m/z=574 (M+Η)+
Example 15: Preparation of 5-(2-methyl-oxazol-5-yl")-thiophene-2-carboxylic acid [5-(benzoyl-methyl-amino)-l-(2-methyIamino-ethylVlH-benzoimidazol-2-yll-amide
Figure imgf000141_0001
To a solution of 5-(2-methyl-oxazol-5-yl)-thiophene-2-carboxylic acid [5-(benzoyl- methyl-amino)-l-(2-oxo-ethyl)-lH-benzoimidazol-2-yl]-amide (50 mg, 0.1 mmol) in TΗF (0.2mL) was added methylamine in TΗF (0.5 M, 0.25 mL) followed by MP- triacetoxyborohydride (107mg, 0.215mmol). The solution was agitated for 16 h. PS- Benzaldehyde (84 mg, 0.1 mmol) and TΗF (1 mL) was added and the mixture was further agitated 4 h. The solution was filtered and the filtrate concentrated in vacuo. The title compound (10 mg 19%) was obtained as a yellow foam after purification by flash chromatography using a l-10%MeOΗ/methylene chloride gradient. Example 16: Preparation of 5-(2-methyl-oxazol-5-vD-thiophene-2-carboxylic acid [5- f(cyclohexyl-methyl-amino)-methvn-l-(2-hydroxy-2-methyl-propylVlH- benzoimidazol-2-vn -amide
Figure imgf000142_0001
To a solution of 5-(2-methyl-oxazol-5-yl)-thiophene-2-carboxylic acid [5-formyl-l-(2- hydroxy-2-methyl-propyl)-lH-benzoimidazol-2-yl]-amide (0.1 g, 0.236 mmol) in TΗF (3 mL) was added cyclohexylmethylamine (0.037 mL, 0.283 mmol) and MP-BΗ(OAc)3 (0.892 g, 1.61 mmol). The solution was agitated for 16 h at room temperature. PS- Isocyanate resin (0.344 g, 0.236 mmol) was added and the reaction agitated for an additional 4 h. The solution was filtered and the filtrate concentrated in vacuo and purified by flash chromatography to afford the title compound (56 mg, 46%).
Example 17: Preparation of 5-(2-methyl-oxazol-5-vD-thiophene-2-carboxylie acid [1- (2-hvdroxy-2-methyl-propyl)-5-phenylaminomethyl-lH-benzoimidazol-2-yll-amide
Figure imgf000142_0002
To a solution of 5-(2-methyl-oxazol-5-yl)-thiophene-2-carboxylic acid [5-formyl-l-(2- hydroxy-2-methyl-propyl)-lH-benzoimidazol-2-yl] -amide (0.1 g, 0.236 mmol) in TΗF (3 mL) was added aniline (0.026 mL, 0.283 mmol) and MP-BΗ3CN (1.2 g, 2.89 mmol). The solution was agitated for 16 h at room temperature. PS-Benzaldehyde resin (0.257 g, 0.236 mmol) was added and the reaction was agitated for an additional 4 h. The solution was filtered and the filtrate was concentrated in vacuo and purified by flash chromatography to afford the title compound (131 mg, 100%).
Example 18: Preparation of 5-(2-methyl-oxazol-5-ylVthiophene-2-carboxylic acid [5-
(2-dimethylamino-ethoxyVl-(2-hydroxy-2-methyl-propyl)-lH-benzoimidazol-2-yll- amide
Figure imgf000143_0001
To a solution of 5-(2-methyl-oxazol-5-yl)-thiophene-2-carboxylic acid [l-(2-hydroxy-2- methyl-propyl)-5-methoxy-lH-benzoimidazol-2-yl] -amide (0.760 g, 1.78 mmol) in methylene chloride (160 mL) was added BBr3 (1 M in methylene chloride, 35.6 mL, 35.64 mmol) at room temperature. The reaction was stirred for 2 h and then quenched with MeOΗ and concentrated in vacuo. Purification by flash chromatography afforded 5- (2-methyl-oxazol-5-yl)-thiophene-2-carboxylic acid [5-hydroxy-l-(2-hydroxy-2-methyl- propyl)-lH-benzoimidazol-2-yl] -amide (0.6g, 86%).
To a solution of the above amide (0.05 g, 0.121 mmol) in DMF (2 mL) was added the hydrochloride salt of (2-chloro-ethyl)-dimethyl-amine (0.016 g, 0.101 mmol) and potassium carbonate (0.033 g, 0.242 mmol) and the mixture was allowed to stir for 16 h. Additional potassium carbonate and alkyl chloride were added and the reaction was stirred another 16 h, then diluted with water and extracted with EtOAc. The combined organics were washed with water and brine, dried over sodium sulfate and filtered. The filtrate was concentrated in vacuo and purified via flash chromatography to afford the title compound as a yellow film (0.012 g, 24%). Examples 19-24 illustrate the synthesis of intermediates which may be used in the preparation of compounds of the invention by methods described in the above synthetic examples
Example 19: Preparation of 2-methyl-l-(2-nitro-phenyIaminoVpropan-2-ol
Figure imgf000144_0001
A solution of l-fluoro-2-nitrobenzene (0.374 mL, 3.51 mmol) and 1,1- dimethylethanolamine (0.375 g, 4.21 mmol) and diisopropylethylamine (1.22 mL, 7.02 mmol) in 10 mL of DMF was heated to 80 °C for 24 h. The reaction mixture was cooled to room temperature and concentrated. The residue was diluted with 20 mL of water and 20 mL of EtOAc, and the organic layer was separated. The aqueous layer was extracted with EtOAc (2 x 10 mL), and the combined organics were washed with saturated NaHCO3 (1 x 20 mL) and brine (1 x 20 mL), then dried over MgSO4 to yield 0.772 g of the title compound which was taken on without further purification.
Example 20: Preparation of 2-methyl-l-(4-fluoro-2-nitro-phenylamino)-propan-2-ol
Figure imgf000144_0002
A solution of l,4-difluoro-2-nitrobenzene (0.392 mL, 3.51 mmol) and 1,1- dimethylethanolamine (0.375 g, 4.21 mmol) and diisopropylethylamine (1.22 mL, 7.02 mmol) in 10 mL of DMF was heated to 80 °C for 24 h. The reaction mixture was cooled to room temperature and concentrated. The residue was diluted with 20 mL of water and 20 mL of EtOAc, and the organic layer was separated. The aqueous layer was extracted with EtOAc (2 x 10 mL), and the combined organics were washed with saturated NaHCO3 (1 x 20 mL) and brine (1 x 20 mL), then dried over MgSO4 to yield 0.887 g of the title compound which was taken on without further purification.
Example 21: Preparation of 2-methyl-l-(4-bromo-2-nitro-phenylaminoVpropan-2-oI
Figure imgf000145_0001
A solution of 4-bromo-l-fluoro-2-nitrobenzene (0.450 mL, 3.51 mmol) and 1,1- dimethylethanolamine (0.375 g, 4.21 mmol) and diisopropylethylamine (1.22 mL, 7.02 mmol) in 10 mL of DMF was heated to 80 °C for 24 h. The reaction mixture was cooled to room temperature and concentrated. The residue was diluted with 20 mL of water and 20 mL of EtOAc, and the organic layer was separated. The aqueous layer was extracted with EtOAc (2 x 10 mL), and the combined organics were washed with saturated NaHCO3 (1 x 20 mL) and brine (1 x 20 mL), then dried over MgSO4 to yield 1.21 g of the title compound which was taken on without further purification.
Example 22: Preparation of 2-methvI-l-(4-trifluoromethyl-2-nitro-phenyIamino)- propan-2-ol
Figure imgf000145_0002
A solution of l-fluoro-2-nitro-4-trifluoromethylbenzene (0.506 mL, 3.51 mmol) and 1,1- dimethylethanolamine (0.375 g, 4.21 mmol) and diisopropylethylamine (1.22 mL, 7.02 mmol) in 10 mL of DMF was heated to 80 °C for 24 h. The reaction mixture was cooled to room temperature and concentrated. The residue was diluted with 20 mL of water and 20 mL of EtOAc, and the organic layer was separated. The aqueous layer was extracted with EtOAc (2 x 10 mL), and the combined organics were washed with saturated NaHCO3 (1 x 20 mL) and brine (1 x 20 mL), then dried over MgSO4 to yield 0.971 g of the title compound which was taken on without further purification.
Example 23: Preparation of 2-methyl-l-(4-methanesulfonyl-2-nitro-phenylaminoV propan-2-ol
Figure imgf000146_0001
A solution of l-fluoro-4-methanesulfonyl-2-nitrobenzene (0.810 g, 3.51 mmol) and 1,1- dimethylethanolamine (0.375 g, 4.21 mmol) and diisopropylethylamine (1.22 mL, 7.02 mmol) in 10 mL of DMF was heated to 80 °C for 24 h. The reaction mixture was cooled to room temperature and concentrated. The residue was diluted with 20 mL of water and 20 mL of EtOAc, and the organic layer was separated. The aqueous layer was extracted with EtOAc (2 x 10 mL), and the combined organics were washed with saturated
NaHCO3 (1 x 20 mL) and brine (1 x 20 mL), then dried over MgSO4 to yield 1.07 g of the title compound which was taken on without further purification.
Example 24: Preparation of [4-(2-hydroxy-2-methyl-propylaιninoV3-nitro-phenyl|- carbamic acid fe -butyl ester
Figure imgf000147_0001
Figure imgf000147_0002
To a solution of 4-fluoro-3-nitroaniline (10 g, 70 mmol) in 100 mL of THF was added Boc O (15.3 g, 64 mmol) and a catalytic amount of N,N-dimethylaminopyridine and the solution was stirred at room temperature for 16 h. The solution was concentrated and diluted with 100 mL of EtOAc, washed with IM HCI (aq) (1 x 50 mL) and saturated NaHCO3 (1 x 50 mL) and dried over Na2SO4. The crude product was concentrated and purified by combiflash to yield 13.28 g of the desired carbamic acid ester.
A solution of the above carbamic acid ester (0.300 g, 1.71 mmol), 1,1-dimethyl ethanolamine (0.125 g, 1.40 mmol) and diisopropylethylamine (0.306 mL, 1.76 mmol) in 3 mL of DMF was heated to 60 °C for 24 h. The reaction mixture was cooled to room temperature and concentrated. The residue was diluted with 10 mL of water and 10 mL of EtOAc, and the organic layer was separated. The aqueous layer was extracted with EtOAc (2 x 50 mL) and the combined organics were washed with saturated NaHCO3 (1 x 10 mL) and brine (1 x 10 mL), then dried over MgSO4 to yield 0.165 g of the title compound which was taken on without further purification.
Example 25: Preparation of 5-(2-methyI-oxazol-5-yl)-thiophene-2-carboxylic acid [1- (2-hydroxy-2-methyl-propyl)-5-pyrrolidin-l-yl-lJ-r-benzoimidazol-2-yn-amide
Figure imgf000148_0001
To a stirred solution of (l-(2-hydroxy-2-methyl-propyl)-2-{[5-(2-methyl-oxazol-5-yl)- thiophene-2-carbonyl]-amino}-lH-benzoimidazol-5-yl)-carbamic acid tert-butyl ester (0.100 g, 0.195 mmol) in 5 mL of dichloromethane was added 0.5ml of TFA. The solution was stirred at room temperature for 16 h and concentrated. The crude product was diluted with 10 mL of dichloromethane, washed with 10 mL of saturated NaΗCO3, back-extracted (2 x 10 mL) with dichloromethane, and dried over MgSO4. The solution was concentrated and purified by combiflash to yield 80 mg (99%) of 5-(2-methyl- oxazol-5 -yl)-thiophene-2-carboxylic acid [5 -amino- 1 -(2-hydroxy-2-methyl-propyl)- 1 H- benzoimidazol-2-yl] -amide.
To a solution of the above intermediate (0.080 g, 0.194 mmol) in 2 mL of dimethylacetamide was added diisopropylethylamine (0.007 mL, 0.039 mmol) and 1,4- dibromobutane (0.026 mL, 0.214 mmol). The mixture was heated at 70 °C for 18 h and cooled to room temperature. The crude product was diluted with 5 mL of dichloromethane and washed with 10 mL of saturated NaHCO3, dried over MgSO4 and concentrated. The crude product was purified by combiflash to yield 0.044 g (49%) of the title compound.
Example 26: Preparation of l-[4-(2-hydroxy-2-methyl-propylaminoV3-nitro- phenvH -pyrrolidin-2-one
Figure imgf000149_0001
To a solution of 4-fluoro-3-nitroaniline (2.00 g, 12.8 mmol) in 20 mL of toluene was added diisopropylethylamine (4.30 mL, 24.0 mmol) and 4-chlorobutyryl chloride (1.58 mL, 14.1 mmol). The solution was stirred for 16 h and concentrated. The crude product was diluted with 10 mL of water and 20 mL of dichloromethane, and the aqueous layer was extracted (3 x 10 mL) with dichloromethane. The combined organic layers were dried over MgSO4 and concentrated to yield 3.0 g of crude amide intermediate which was taken on without further purification.
To a solution of the above amide intermediate (0.320 g, 1.23 mmol) in 5 mL of dimethy lformamide was added 1,1 -dimethyl ethanolamine (0.140 g, 1.57 mmol). Diisopropylethylamine was added (0.420 mL, 2.39 mmol) and the reaction was stirred at 40 °C for 16 h. The solution was diluted with 10 mL of EtOAc and 10 mL of water, and the organic layer was then washed with saturated NaHCO3 and dried over Na2SO4. The solution was filtered and concentrated to yield 156 mg of 4-chloro-N-[4-(2-hydroxy-2- methyl-propylamino)-3-nitro-phenyl] -butyramide that was taken on without further purification.
To a solution of the above butyramide intermediate (0.156 g, 0.473 mmol) in 1 mL of MeOH was added 1 mL of a 2M sodium methoxide in MeOH solution and stirred overnight. The solution was diluted with 5 mL of dichloromethane and 5 mL of water and the aqueous layer was extracted (2 x 5 mL) with dichloromethane and dried over MgSO4, concentrated and purified by combiflash to yield 85 mg (61%) of the title compound.
Example 27: Preparation of 5-(2-methyl-oxazol-5-vD-thiophene-2-earboxyIic acid [1- (2-hydroxy-2-methyl-propyl -5-oxazol-5-yl-lH-benzoimidazol-2-yll-amide
KjCOs
Figure imgf000150_0001
Figure imgf000150_0002
A mixture of 1 (0.200 g, 0.471 mmol), tosylmethyl isocyanide (0.095 g, 0.471 mmol) and K2CO3 (0.195 g, 1.41 mmol) in 5 mL of MeOH was heated to 60 °C for 1 h. The mixture was concentrated and the crude product was recrystallized from EtOH as the potassium salt. The salt was diluted with 10 mL of H2O and 10 mL of dichloromethane. The organic phase was washed with 5 mL of saturated NHtCl and 5 mL of saturated NaCl. The organic solution was dried over MgSO4 and concentrated, and the crude product was purified by combiflash to yield 61 mg (28%) of the title compound.
The following additional compounds in Table II can be made by methods similar to those in the examples listed above and by methods known in the art. Table II
Figure imgf000150_0003
Figure imgf000151_0001
Figure imgf000152_0001
Figure imgf000153_0001
Figure imgf000154_0001
Figure imgf000155_0001
Figure imgf000156_0001
Figure imgf000157_0001
Figure imgf000158_0001
Figure imgf000159_0001
Figure imgf000160_0001
Figure imgf000161_0001
Figure imgf000162_0001
Figure imgf000163_0001
Figure imgf000164_0001
5 -Phenyl-thiophene-2-carboxylic
Example acid [5-(benzoyl-methyl-amino)- 552 113 1 -(2-dimethylcarbamoyl-ethyl)- lH-benzoimidazol-2-yl]-amide
5 -Pyridin-4-yl-thiophene-2-
Example carboxylic acid [5-[(3-cyano- 114 benzoyl)-methyl-amino]-l-((R)- 599 hydroxy-2-phenyl-ethyl)- 1 Η- benzoimidazol-2-yl] -amide
5-(2-Fluoro-pyridin-4-yl)- thiophene-2-carboxylic acid [5-
Example [(3 -cyano-benzoy l)-methyl- 115 amino] - 1 -((R)-2-hydroxy-2- 617
Figure imgf000165_0001
phenyl-ethyl)- 1 H-benzoimidazol- 2-yl] -amide
5 -Pyridin-3 -yl-thiophene-2-
Example carboxylic acid [5 -(benzoyl- methyl-amino)- 1 -((R)-2-hydroxy- 574 116 2-ρhenyl-ethyl)-lH-
Figure imgf000165_0002
benzoimidazol-2-yl] -amide
.N-N 5-Phenyl-[l ,3 ,4]oxadiazole-2- carboxylic acid [5-(benzoyl-
Example methyl-amino)- 1 -(2-carbamoyl- 510 117 NH, ethyl)- 1 H-benzoimidazol-2-yl] - amide
5 -Pyridin-3 -yl-thiophene-2- carboxylic acid [5 -(benzoyl-
Example methyl-amino)- 1 -(2- 553 118 dimethylcarbamoyl-ethyl)- 1H-
Figure imgf000165_0003
benzoimidazol-2-yl] -amide
Figure imgf000166_0001
Figure imgf000167_0001
Figure imgf000168_0001
Figure imgf000169_0001
Figure imgf000170_0001

Claims

WHAT IS CLAIMED IS:
1. A compound of the formula (I):
Figure imgf000171_0001
wherein:
Ri is hydrogen or alkyl; R2, covalently attached at the indicated 4-, 5-, 6- or 7-position of the formula (I), is chosen from hydrogen, alkyl, alkoxy and halogen;
Ari is chosen from carbocycle and heteroaryl each optionally substituted with one or more amine, alkyl, alkoxy or halogen;
Ar2 is chosen from carbocycle, heterocycle and heteroaryl each optionally substituted with one or more Ra;
R3 is Ct-io alkyl chain branched or unbranched optionally substituted with one or more Rb, or R3 is the group:
-(CH2)„- L-Re, wherein L is chosen from a bond, -NH-C(O)-, -O-C(O)-, -C(O)- and -S(O)ra- wherein m is 0, 1 or 2, and wherein said group is optionally substituted by one or more Rb; wherein Re is independently chosen from hydrogen, hydroxy, alkyl, alkoxy, alkylthio, arylCo-s alkyl, aryloxyCo-5 alkyl, heteroarylCo-5 alkyl, cycloalkylCo.5 alkyl, heterocyclylCo-5 alkyl and amino said amino is optionally mono-or di-substituted by acyl, alkyl, alkoxycarbonyl, cycloalkylC0-5 alkyl, arylC0.5 alkyl, heteroarylCo-5 alkyl or heterocyclylCo-5 alkyl; n is i - 10; R4 is a group chosen from:
Figure imgf000172_0001
Figure imgf000172_0002
wherein if p or q > 0 then a hydrogen atom from their respective -(CH2)- group(s) may be replaced with a CLIO alkyl wherein one or more -CH2- groups of said alkyl are optionally replaced by a heteroatom group chosen from O, S and NH,
wherein R» is covalently attached at the indicated 5- or 6- position of the formula (I), p, q, t and z are each independently chosen from 0,1 or 2;
Rs is chosen from arylCo-5 alkyl, alkyl, heteroarylCo-s alkyl, cycloalkylC0.5 alkyl and heterocyclylCo-5 alkyl, each R5 optionally substituted with one or more Rc;
R is hydrogen, alkenyl or alkyl;
or R5 and R together with the nitrogen atom to which they are attached form: a 4-7-membered monocyclic ring or an 8-14-membered bicyclic ring, wherein each monocyclic or bicyclic ring optionally contains an additional 1 to 3 heteroatoms chosen from N, O and S and each ring is aromatic or nonaromatic, and wherein each monocyclic or bicyclic ring is optionally substituted by one or more Rc;
each Ra, Rb or Rc are independently chosen from hydrogen, alkyl, alkenyl, alkynyl, cycloalkyl, cycloalkenyl, aryl, arylalkyl, aryloxy, alkoxy, alkylthio, acyl, alkoxycarbonyl, acyloxy, acylamino, sulphonylamino, aminosulfonyl, alkylsulfonyl, carboxy, carboxamide, oxo, hydroxy, halogen, trifluoromethyl, nitro, nitrile and amino optionally mono-or-di-substituted by alkyl, acyl or alkoxycarbonyl, wherein any of the above Ra, Rb or Rc are optionally halogenated where possible;
and
Xa and Xb are oxygen or sulfur; or the pharmaceutically acceptable salts thereof.
2. The compound according to claim 1 and wherein:
Ri is hydrogen;
R2 is chosen from hydrogen, Cι_3 alkyl, C^ alkoxy and halogen;
Ari is phenyl or heteroaryl chosen from thienyl, furanyl, isoxazolyl, oxazolyl, thiazolyl, oxadiazolyl, thiadiazolyl, tetrazolyl, pyrazolyl, pyrrolyl, imidazolyl, pyridinyl, pyrimidinyl, pyrazinyl, pyridazinyl and pyranyl;
Ar2 is chosen from C3.8 cycloalkyl, C .8 cycloalkenyl, phenyl, naphthyl and heteroaryl chosen from thienyl, furanyl, isoxazolyl, oxazolyl, thiazolyl, thiadiazolyl, tetrazolyl, pyrazolyl, pyrrolyl, imidazolyl, pyridinyl, pyrimidinyl, pyrazinyl, pyridazinyl, pyranyl, quinoxalinyl, indolyl, benzimidazolyl, benzoxazolyl, benzothiazolyl, benzothiophenyl, benzodioxolyl, quinolinyl, quinazolinyl and indazolyl each is optionally substituted with one or more Ra;
R3 is Cι„ιo alkyl chain branched or unbranched optionally substituted with one or more
Rb, or R3 is: -(CH2)n- L-Re, wherein L is chosen from a bond, -O-C(O)-, -C(O)- and - S(O)m- wherein m is 0, 1 or 2, and wherein said group is optionally substituted by one or more Rb; wherein Re is independently chosen from hydrogen, hydroxy, C1.5 alkyl, C1-5 alkoxy, C1-5 alkylthio, phenyl, naphthyl, benzyl, phenethyl, heteroarylCo-5 alkyl, C3.7 cycloalkylCo-5 alkyl, heterocyclylCo-5 alkyl and amino said amino is optionally mono-or di-substituted by C1.5 acyl, C1.5 alkyl, Ci-5 alkoxycarbonyl, arylCo-5 alkyl, heteroarylCo-5 alkyl or heterocyclylCo-5 alkyl; and wherein each recited heteroaryl in this paragraph is chosen from thienyl, furanyl, isoxazolyl, oxazolyl, thiazolyl, thiadiazolyl, tetrazolyl, pyrazolyl, pyrrolyl, imidazolyl, pyridinyl, pyrimidinyl, pyrazinyl, pyridazinyl and pyranyl and wherein each recited heterocyclyl in this paragraph is chosen from pyrrolidinyl, morpholinyl, thiomorpholinyl, dioxalanyl, piperidinyl and piperazinyl;
R4 is a group chosen from:
Figure imgf000174_0001
R5 is chosen from phenyl, naphthyl, benzyl, phenethyl, C1-5 alkyl, heteroarylCo-5 alkyl wherein the heteroaryl is chosen from thienyl, furanyl, isoxazolyl, oxazolyl, thiazolyl, thiadiazolyl, tetrazolyl, pyrazolyl, pyrrolyl, imidazolyl, pyridinyl, pyrimidinyl, pyrazinyl, pyridazinyl and pyranyl, C3.7 cycloalkylCo-5 alkyl and heterocyclylCo-5 alkyl wherein the heterocyclyl is chosen from aziridinyl, pyrrolidinyl, morpholinyl, thiomorpholinyl, tetrahydrofuranyl, dioxalanyl, piperidinyl and piperazinyl, each R5 is optionally substituted with one or more Rc;
each Ra, Rb or Rc are independently chosen from hydrogen, Cι_5 alkyl, C2.5 alkenyl, C2-5 alkynyl, C3.8 cycloalkyl, C4.8 cycloalkenyl, phenyl, benzyl, phenoxy, C1.5 alkoxy, C1.5 alkylthio, C1.5 acyl, C1.5 alkoxycarbonyl, C1.5 acyloxy, C1.5 acylamino, C1.5 sulphonylamino, aminosulfonyl, C1.5 alkylsulfonyl, carboxy, carboxamide, oxo, hydroxy, halogen, trifluoromethyl, nitro, nitrile and amino optionally mono-or-di-substituted by Ci. 5 alkyl, Cι.5 acyl or C1.5 alkoxycarbonyl, wherein any of the above Ra, Rb or Rcare optionally halogenated where possible;
R is hydrogen, C3_ιo alkenyl or C1.5 alkyl; and
Xa is oxygen.
3. The compound according to claim 2 and wherein:
R2 is chosen from hydrogen and Cι_3 alkyl;
Ari is chosen from phenyl, thienyl, furanyl, isoxazolyl, oxazolyl, imidazolyl, oxadiazolyl, thiadiazolyl, pyrazolyl and pyridinyl;
Ar2 is chosen from C .8 cycloalkenyl, C4.8 cycloalkyl, phenyl, naphthyl, benzothiophenyl, benzodioxolyl, quinolinyl, indolyl, thiazolyl, thienyl, furanyl, isoxazolyl, oxazolyl, imidazolyl, thiadiazolyl, pyrazolyl, pyrazinyl and pyridinyl each is optionally substituted with one or more Ra ; Rβ is independently chosen from hydroxy, C1-5 alkyl, C1.5 alkoxy, phenyl, benzyl, phenethyl, heteroarylCo-5 alkyl, heterocyclylC0-5 alkyl, C3.7 cycloalkyl and amino said amino is optionally mono-or di-substituted by C .5 acyl, C1-5 alkyl, C1.5 alkoxycarbonyl, arylCo-5 alkyl or heteroarylCo.5 alkyl; and wherein each recited heteroaryl in this paragraph is chosen from thienyl, furanyl, isoxazolyl, oxazolyl, thiazolyl, thiadiazolyl, tetrazolyl, pyrazolyl, pyrrolyl and imidazolyl, each optionally substituted by Rb; n is 1-6;
R5 is chosen from phenyl, naphthyl, benzyl, phenethyl, C1-5 alkyl, heteroarylCo-5 alkyl wherein the heteroaryl in this paragraph is chosen from thienyl, furanyl, imidazolyl and pyridinyl, C3- cycloalkylCo-5 alkyl and heterocyclylCo-5 alkyl wherein the heterocyclyl is chosen from aziridinyl, pyrrolidinyl, tetrahydrofuranyl, tetrahydropyridinyl, morpholinyl,- thiomorpholinyl, piperidinyl and piperazinyl, each R5 is optionally substituted with one or more Rc;
R7 is hydrogen, propenyl or C1.3 alkyl.
4. The compound according to claim 3 and wherein:
R2 is chosen from hydrogen and methyl;
Ar2 is chosen from cyclopentyl, cyclohexyl, cycloheptyl, cyclopentenyl, cyclohexenyl, cycloheptenyl,phenyl, naphthyl, benzothiophenyl, benzodioxolyl, quinolinyl, indolyl, thiazolyl, thienyl, furanyl, isoxazolyl, oxazolyl, imidazolyl, thiadiazolyl, oxadiazolyl, pyrazinyl and pyridinyl each is optionally substituted with one or more Ra;
R3 is: -(CH2)„-C(O)-R6 θr -(CEfe Rβ; wherein Re is independently chosen from hydroxy, Cι_5 alkyl, C1-5 alkoxy, phenyl, morpholinylCo-5 alkyl, piperazinylC0.5 alkyl, imidazolylCo-5 alkyl, pyrrolidinylCo-s alkyl, pyrrolidinonylC0.5 alkyl, thienylC0.5 alkyl, C3.7 cycloalkyl and amino said amino is optionally mono-or di-substituted by C1.5 alkyl or Cι_5 alkoxycarbonyl;
R5 is chosen from phenyl, furanyl, benzyl, phenethyl, C1.3 alkyl and C3.7 cycloalkylCo-5 alkyl each optionally substituted with one or more Rc;
each Ra, Rb or Rc are independently chosen from C1.5 alkyl, C2.5 alkenyl, C3.8 cycloalkyl, C4.8 cycloalkenyl, phenyl, C1.5 alkoxy, Ci-s alkylthio, amino optionally mono-or-di- substituted by CLS alkyl, C1-5 alkoxycarbonyl, carboxamide, hydroxy, halogen, trifluoromethyl, nitro and nitrile, wherein any of the above Ra, Rb or Rc are optionally halogenated where possible;
R7 is C1.3 alkyl.
5. The compound according to claim 4 and wherein:
R2 is hydrogen;
Ari is chosen from phenyl, thienyl, furanyl, isoxazolyl and pyridinyl;
Ar2 is chosen from cycloheptyl, cycloheptenyl, phenyl, naphthyl, benzothiophenyl, benzodioxolyl, quinolinyl, indolyl, thiazolyl, thienyl, furanyl, isoxazolyl, oxazolyl, thiadiazolyl, pyrazinyl and pyridinyl each is optionally substituted with one or more Ra;
R5 is chosen from methyl, CF3, cyclopentyl, phenyl and cyclohexyl each optionally substituted with one or more Rc; and n is 2-5.
6. The compound according to claim 5 and wherein:
Ari is chosen from phenyl, thien-2-yl, isoxazol-5-yl and pyridin-3 -yl;
Ra is chosen from phenyl, C6_8 cycloalkyl, C6.8 cycloalkenyl, C1.3 alkoxy, CM alkyl, C2.3 alkenyl, C1.3 alkylthio, amino, carboxamide, fluoro, chloro, nitro and nitrile;
Rt is chosen from:
Figure imgf000178_0001
, and
Re is independently chosen from hydroxy, methyl, ethyl, C1.3 alkoxy, phenyl, morpholinyl, piperazinyl, imidazolyl, pyrrolidinyl, pyrrolidinonyl, thienylCo-5 alkyl, C3. cycloalkyl and amino said amino is optionally mono-or di-substituted by C1-5 alkyl or C1-5 alkoxycarbonyl;
and each Rb or Rc are independently chosen from C1-3 alkoxy, amino optionally mono-or-di- substituted by C1.3 alkyl, carboxamide, hydroxy, fluoro, chloro, bromo, trifluoromethyl, nitro and nitrile.
7. The compound according to any one of claims 1-6 and wherein: Rt is covalently attached at the indicated 5- position of the formula (I) or t is covalently attached at the indicated 6- position of the formula (I).
8. A compound of the formula:
Figure imgf000179_0001
wherein:
Ar2 is chosen from cycloheptyl, cycloheptenyl, phenyl, naphthyl, benzothiophenyl, benzodioxolyl, quinolinyl, indolyl, thiazolyl, thienyl, furanyl, isoxazolyl, oxazolyl, thiadiazolyl, pyrazinyl and pyridinyl each is optionally substituted with one or more Ra chosen from phenyl, C6.8 cycloalkyl, C6_8 cycloalkenyl, C1.3 alkoxy, CM alkyl, C2-3 alkenyl, C1.3 alkylthio, amino, carboxamide, fluoro, chloro, nitro and nitrile;
R3 is:
-(CH2)n-C(O)-R6 or -(CH2)„- Re;
Re is independently chosen from hydroxy, methyl, ethyl, C1-3 alkoxy, phenyl, morpholinyl, piperazinyl, imidazolyl, pyrrolidinyl, pyrrolidinonyl, thienylCo-5 alkyl, C3. cycloalkyl and amino said amino is optionally mono-or di-substituted by Cι-5 alkyl or C1.5 alkoxycarbonyl;
Rs is chosen from methyl, CF3, cyclopentyl, phenyl and cyclohexyl each optionally substituted with one or more Rc chosen from C1.3 alkoxy, amino optionally mono-or-di- substituted by Cι_3 alkyl, carboxamide, hydroxy, fluoro, chloro, bromo, trifluoromethyl, nitro and nitrile and
R7 is C1-3 alkyl; or the pharmaceutically acceptable salts thereof.
9. The compound according to claim 8 and wherein: Ar2 is chosen from phenyl, indolyl, thiazolyl, thienyl, furanyl, isoxazolyl, oxazolyl, thiadiazolyl, pyrazinyl and pyridinyl each is optionally substituted with one or more Ra chosen from phenyl, C6-8 cycloalkyl, C6.8 cycloalkenyl, C1-3 alkoxy, C alkyl, C2.3 alkenyl, C^ alkylthio, amino, carboxamide, fluoro, chloro, nitro and nitrile.
10. The compound according to claim 9 and wherein: Ar2 is chosen from
Figure imgf000180_0001
each is optionally substituted with one Ra chosen from phenyl, Cι-3 alkoxy, CM alkyl, C2. 3 alkenyl, C1.3 alkylthio, amino, carboxamide, fluoro, chloro, nitro and nitrile;
with the proviso that if Ar2 is:
Figure imgf000180_0002
then Ra must be -NO2, -NH2 or -CN.
11. A pharmaceutical composition comprising a pharmaceutically effective amount of a compound according to claim 1 and one or more pharmaceutically acceptable carriers and/or adjuvants.
12. Use of one or more compounds according to claim 1, for the manufacture of a pharmaceutical composition for the treatment of an immunological disorder.
13. Use of one or more compounds according to claim 1, for the manufacture of a pharmaceutical composition for the treatment of an inflammatory disorder.
14. Use of one or more compounds according to claim 1, for the manufacture of a pharmaceutical composition for the treatment of an allergic disorder.
15. Use of one or more compounds according to claim 1, for the manufacture of a pharmaceutical composition for the treatment of a disease chosen from chronic inflammation, cancer, contact dermatitis, psoriasis, rheumatoid arthritis, multiple sclerosis, type 1 diabetes, inflammatory bowel disease, Guillain-Barre syndrome, Crohn's disease, ulcerative colitis, graft versus host disease, lupus erythematosus, asthma, chronic obstructive pulmonary disease (COPD), adult respiratory distress syndrome (ARDS), bronchitis, conjunctivitis, dermatitis and allergic rhinitis.
16. Use of one or more compounds according to claim 1, for the manufacture of a pharmaceutical composition to be used in combination with a vaccine.
PCT/US2005/004183 2004-02-12 2005-02-09 Thiophene -2- carboxylic acid - (1h - benzimidazol - 2 yl) - amide derivatives and related compounds as inhibitors of the tec kinase itk (interleukin -2- inducible t cell kinase) for the treatment of inflammation, immunological and allergic disorders WO2005079791A1 (en)

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