Releases: torognes/vsearch
VSEARCH 2.8.2
Fix for wrong placement of semicolons in header lines in some cases when using the sizeout or xsize options. Reduced memory requirements for full-length dereplication in cases with many duplicate sequences. Improved wording of fastq_mergepairs report. Updated manual regarding use of sizein and sizeout with dereplication. Changed a compiler option.
VSEARCH 2.8.1
Fixes for compilation warnings with GCC 8.
VSEARCH 2.8.0
Added fastq_maxdiffpct option.
VSEARCH 2.7.1
Fixes several bugs on Windows.
VSEARCH 2.7.0
Added cluster_unoise, uchime2_denovo and uchime3_denovo commands.
VSEARCH 2.6.2
Fix for partially inactive xsize option.
VSEARCH 2.6.0
Rewritten paired-end reads merger with improved accuracy. Decreased default value for fastq_minovlen option from 16 to 10. The default value for the fastq_maxdiffs option is increased from 5 to 10. There are now other more important restrictions that will avoid merging reads that cannot be reliably aligned.
VSEARCH 2.5.2
Fix bug with '-' not treated as stdin when used as argument to fastq_eestats2 option.
VSEARCH 2.5.1
Fixed bug with bad default value of 1 instead of 32 for minseqlength when using the makeudb_usearch command.
VSEARCH 2.5.0
Support for UDB database files. New commands: fastq_stripright, fastq_eestats2, makeudb_usearch, udb2fasta, udbinfo, and udbstats. New general option: no_progress. New options minsize and maxsize to fastx_filter. Minor bug fixes, error message improvements and documentation updates.